Data search
Results for MligTC455_35196
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35196 | 1291 | 26.90 | Mlig455_049177 | Neo: - Age: Down-Up-Up |
METTL27 | Mlig455_049177 {REF} {Length: 1703} {Pfam: Methyltransferase domain [PF13649.8, score=28.8]; Methyltransferase domain [PF13489.8, score=20.4]; Methyltransferase domain [PF08241.14, score=19.6]; ubiE/COQ5 methyltransferase family [PF01209.20, score=18.9]} {Human: ENSG00000165171, METTL27, methyltransferase like 27, [Score=65.1, Expect=3e-13]} {Mouse: ENSMUSG00000040557, Mettl27, methyltransferase like 27, [Score=54.3, Expect=5e-10]} {Smed: dd_Smed_v6_5408_0_1, dd_Smed_v6_5408_0_1, [Score=77.4, Expect=2e-18]} {RNA1509_53518} {RNA1310_14261} {RNA815_8503} |
Cumulative graph for MligTC455_35196
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2 | 5.002 | 0.04217 | 0.49713 | |
| RegionR2 | 0.231 | 5.002 | 0.53165 | 0.90294 | |
| RegionR3 | 0.251 | 5.002 | 0.41434 | 0.93939 | |
| RegionR4 | 0.101 | 5.002 | 0.77432 | 1.00000 | |
| RegionR5 | 0.816 | 5.002 | 0.00287 | 0.02282 | |
| RegionR6 | 0.222 | 5.002 | 0.48113 | 1.00000 | |
| RegionR7 | 0.47 | 5.002 | 0.19428 | 0.80031 | |
| RegionR8 | -0.091 | 5.002 | 0.84757 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.489 | 5.002 | 0.48580 | 1.00000 | |
| RegenerationR2 | -0.19 | 5.002 | 0.53086 | 0.88466 | |
| RegenerationR3 | 0.029 | 5.002 | 0.93174 | 1.00000 | |
| RegenerationR4 | 0.234 | 5.002 | 0.48960 | 0.86438 | |
| RegenerationR5 | -0.342 | 5.002 | 0.26218 | 0.69374 | |
| RegenerationR6 | 0.122 | 5.002 | 0.71736 | 0.93389 | |
| RegenerationBL | -0.071 | 5.002 | 0.85106 | 1.00000 | |
| RegenerationTP | 0.123 | 5.002 | 0.76041 | 1.00000 |
Genes with expression patterns similar to MligTC455_35196
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35196 | 1291 | 26.9 | Mlig455_049177 | Neo: - Age: Down-Up-Up |
METTL27 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049177 {REF} {Length: 1703} {Pfam: Methyltransferase domain [PF13649.8, score=28.8]; Methyltransferase domain [PF13489.8, score=20.4]; Methyltransferase domain [PF08241.14, score=19.6]; ubiE/COQ5 methyltransferase family [PF01209.20, score=18.9]} {Human: ENSG00000165171, METTL27, methyltransferase like 27, [Score=65.1, Expect=3e-13]} {Mouse: ENSMUSG00000040557, Mettl27, methyltransferase like 27, [Score=54.3, Expect=5e-10]} {Smed: dd_Smed_v6_5408_0_1, dd_Smed_v6_5408_0_1, [Score=77.4, Expect=2e-18]} {RNA1509_53518} {RNA1310_14261} {RNA815_8503} |
| 2. | MligTC455_43669 | 4737 | 98.69 | Mlig455_042144 | Neo: - Age: Down-Up-Down |
ATP1B1 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_042144 {REF} {Length: 1667} {TRANSSPLICED} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=215.3]} {Human: ENSG00000143153, ATP1B1, ATPase Na+/K+ transporting subunit beta 1, [Score=112, Expect=2e-28]} {Mouse: ENSMUSG00000026576, Atp1b1, ATPase, Na+/K+ transporting, beta 1 polypeptide, [Score=114, Expect=2e-29]} {Dmel: FBgn0015777, nrv2, nervana 2, [RH, Score=162, Expect=1e-47]} {Celegans: WBGene00010117, nkb-3, Probable sodium/potassium-transporting ATPase subunit beta-3, [Score=153, Expect=2e-44]} {Smed: dd_Smed_v6_2210_0_1, dd_Smed_v6_2210_0_1, [RH, Score=177, Expect=6e-54]} {RNA1509_33850, RNA1509_51210, RNA1509_58361} {RNA1310_399.1, RNA1509_33850, RNA1509_58361} {RNA1509_33850, RNA1509_58361, RNA815_7803} |
| 3. | MligTC455_44117 | 825 | 17.19 | Mlig455_002829 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.090/0.00969 |
TENT2 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_002829 {REF} {Length: 1523} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=69.9]; Cid1 family poly A polymerase [PF03828.21, score=42.3]} {Human: ENSG00000164329, TENT2, terminal nucleotidyltransferase 2, [RH, Score=225, Expect=6e-68]} {Mouse: ENSMUSG00000042167, Tent2, terminal nucleotidyltransferase 2, [RH, Score=221, Expect=3e-66]} {Dmel: FBgn0038934, Gld2, GLD2 poly(A) polymerase, [RH, Score=227, Expect=6e-65]} {Celegans: WBGene00001596, gld-2, Poly(A) RNA polymerase gld-2, [RH, Score=222, Expect=4e-64]} {Smed: dd_Smed_v6_28587_0_1, dd_Smed_v6_28587_0_1, [RH, Score=391, Expect=2e-126]} {RNA1509_34801} {RNA1310_20023, RNA1509_34801} {RNA1509_34801, RNA815_13106} |
| 4. | MligTC455_52212 | 1606 | 33.46 | Mlig455_014430 | Neo: - Age: - Regeneration-upregulated BL: 1.347 Regeneration-enriched BL: 1.347 |
MARK2 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_014430 {REF} {Length: 5942} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=253.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=155.0]; Kinase associated domain 1 [PF02149.21, score=67.5]; Kinase-like [PF14531.8, score=29.6]; ABC1 atypical kinase-like domain [PF03109.18, score=27.7]; RIO1 family [PF01163.24, score=19.2]} {Human: ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [RH, Score=574, Expect=0.0]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [RH, Score=571, Expect=0.0]; ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [RH, Score=559, Expect=0.0]; ENSG00000116141, MARK1, microtubule affinity regulating kinase 1, [RH, Score=551, Expect=0.0]} {Mouse: ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [RH, Score=573, Expect=0.0]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [RH, Score=569, Expect=0.0]; ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [RH, Score=554, Expect=0.0]; ENSMUSG00000026620, Mark1, MAP/microtubule affinity regulating kinase 1, [RH, Score=551, Expect=0.0]} {Dmel: FBgn0260934, par-1, [RH, Score=566, Expect=0.0]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [RH, Score=555, Expect=7e-180]} {Smed: dd_Smed_v6_3685_0_1, dd_Smed_v6_3685_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_2419} {RNA1310_1494} {RNA815_6824} |
| 5. | MligTC455_52213 | 1604 | 33.41 | Mlig455_070178 | Neo: - Age: - Regeneration-upregulated BL: 1.322 Regeneration-enriched BL: 1.322 |
MARK2 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_070178 {REF} {Length: 4522} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=253.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=154.7]; Kinase-like [PF14531.8, score=30.7]; ABC1 atypical kinase-like domain [PF03109.18, score=27.9]; RIO1 family [PF01163.24, score=19.2]} {Human: ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [RH, Score=575, Expect=0.0]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [RH, Score=571, Expect=0.0]; ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [RH, Score=559, Expect=0.0]; ENSG00000116141, MARK1, microtubule affinity regulating kinase 1, [RH, Score=552, Expect=0.0]} {Mouse: ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [RH, Score=575, Expect=0.0]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [RH, Score=570, Expect=0.0]; ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [RH, Score=553, Expect=0.0]; ENSMUSG00000026620, Mark1, MAP/microtubule affinity regulating kinase 1, [RH, Score=550, Expect=0.0]} {Dmel: FBgn0260934, par-1, [RH, Score=566, Expect=0.0]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [RH, Score=555, Expect=0.0]} {Smed: dd_Smed_v6_3685_0_1, dd_Smed_v6_3685_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_2419} {RNA1310_1494} {RNA815_2395} |
| 6. | MligTC455_37052 | 697 | 14.51 | Mlig455_036590 | Neo: - Age: Down-Up-Down |
ACBD3 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_036590 {REF} {Length: 3151} {Pfam: Golgi-dynamics membrane-trafficking [PF13897.8, score=217.5]; Acyl CoA binding protein [PF00887.21, score=44.8]} {Human: ENSG00000182827, ACBD3, acyl-CoA binding domain containing 3, [Score=203, Expect=6e-58]} {Mouse: ENSMUSG00000026499, Acbd3, acyl-Coenzyme A binding domain containing 3, [Score=201, Expect=2e-57]} {Dmel: FBgn0031061, CG14232, [Score=171, Expect=6e-47]} {Celegans: WBGene00012765, Y41E3.7, [Score=207, Expect=9e-62]} {Smed: dd_Smed_v6_2498_0_1, dd_Smed_v6_2498_0_1, [Score=196, Expect=4e-58]} {RNA1509_15486} {RNA1310_18462.1} {RNA815_2205.2} |
| 7. | MligTC455_32834 | 594 | 12.38 | Mlig455_048601 | Neo: - Age: - |
GTF3C5 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_048601 {REF} {Length: 1923} {Pfam: RNA polymerase III transcription factor (TF)IIIC subunit HTH domain [PF09734.11, score=60.4]; Tau95 Triple barrel domain [PF17682.3, score=52.0]} {Human: ENSG00000148308, GTF3C5, general transcription factor IIIC subunit 5, [RH, Score=104, Expect=3e-23]} {Mouse: ENSMUSG00000026816, Gtf3c5, general transcription factor IIIC, polypeptide 5, [RH, Score=103, Expect=6e-23]} {Dmel: FBgn0086445, l(2)37Cd, lethal (2) 37Cd, [Score=80.1, Expect=1e-15]} {Celegans: WBGene00011368, tftc-5, Transcription Factor ThreeC subunit (GTF3C homolog), [RH, Score=86.7, Expect=5e-18]} {Smed: dd_Smed_v6_5043_0_1, dd_Smed_v6_5043_0_1, [Score=68.2, Expect=4e-12]} {RNA1509_16239, RNA1509_36387} {RNA1310_15085, RNA1509_16239, RNA1509_36387} {RNA1509_16239, RNA1509_36387, RNA815_6459} |
| 8. | MligTC455_51520 | 3550 | 73.96 | Mlig455_029218, Mlig455_035626 | Neo: - Age: - |
CREBBP | 0.952 | - | - | - | 0.952 | - | - | Mlig455_029218 {REF} {Length: 7171} {TRANSSPLICED} {Pfam: Histone acetylation protein [PF08214.13, score=213.3]; KIX domain [PF02172.18, score=106.6]; TAZ zinc finger [PF02135.18, score=78.0]; Bromodomain [PF00439.27, score=64.3]; Domain of Unknown Function (DUF902) [PF06001.15, score=55.5]; Zinc finger, ZZ type [PF00569.19, score=42.1]; KIX domain [PF16987.7, score=24.8]} {Human: ENSG00000005339, CREBBP, CREB binding protein, [RH, Score=897, Expect=0.0]; ENSG00000100393, EP300, E1A binding protein p300, [RH, Score=881, Expect=0.0]} {Mouse: ENSMUSG00000022521, Crebbp, CREB binding protein, [RH, Score=897, Expect=0.0]; ENSMUSG00000055024, Ep300, E1A binding protein p300, [RH, Score=875, Expect=0.0]} {Dmel: FBgn0261617, nej, nejire, [RH, Score=893, Expect=0.0]} {Celegans: WBGene00000366, cbp-1, [RH, Score=854, Expect=0.0]} {Smed: dd_Smed_v6_7719_0_1, dd_Smed_v6_7719_0_1, [RH, Score=932, Expect=0.0]} {RNA1509_1063, RNA1509_14634, RNA1509_35924, RNA1509_9308} {RNA1310_739.1, RNA1509_14634, RNA1509_35924, RNA1509_9308} {RNA1509_14634, RNA1509_35924, RNA1509_9308, RNA815_341} Mlig455_035626 {REF} {Length: 7054} {TRANSSPLICED} {Pfam: Histone acetylation protein [PF08214.13, score=215.0]; KIX domain [PF02172.18, score=105.1]; TAZ zinc finger [PF02135.18, score=79.1]; Bromodomain [PF00439.27, score=64.8]; Domain of Unknown Function (DUF902) [PF06001.15, score=55.8]; Zinc finger, ZZ type [PF00569.19, score=42.4]; KIX domain [PF16987.7, score=24.8]} {Human: ENSG00000005339, CREBBP, CREB binding protein, [RH, Score=877, Expect=0.0]; ENSG00000100393, EP300, E1A binding protein p300, [RH, Score=866, Expect=0.0]} {Mouse: ENSMUSG00000022521, Crebbp, CREB binding protein, [RH, Score=876, Expect=0.0]; ENSMUSG00000055024, Ep300, E1A binding protein p300, [RH, Score=858, Expect=0.0]} {Dmel: FBgn0261617, nej, nejire, [RH, Score=881, Expect=0.0]} {Celegans: WBGene00000366, cbp-1, [RH, Score=845, Expect=0.0]} {Smed: dd_Smed_v6_7719_0_1, dd_Smed_v6_7719_0_1, [RH, Score=924, Expect=0.0]} {RNA1509_1063} {RNA1310_739.1, RNA1509_1063} {RNA1509_1063, RNA815_341} |
| 9. | MligTC455_45690 | 2497 | 52.02 | Mlig455_051204 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.586 Region-enriched R7: 1.072/0.04886 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_051204 {REF} {Length: 1686} {RNA1509_29397} {RNA1310_21586, RNA1509_29397} {RNA1509_29397, RNA815_10734.1} |
Berezikov Lab - 2020-2021 © ERIBA