Data search
Results for MligTC455_35204
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35204 | 280 | 5.84 | Mlig455_041604 | Neo: - Age: - Region-enriched R2: 2.723/0.02353 |
KIF1B | Mlig455_041604 {REF} {Length: 4878} {Pfam: Kinesin motor domain [PF00225.25, score=337.9]; Microtubule binding [PF16796.7, score=66.4]; Kinesin protein 1B [PF12423.10, score=37.7]; FHA domain [PF00498.28, score=29.8]; Kinesin-associated [PF16183.7, score=26.9]; First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=24.6]; XH domain [PF03469.16, score=19.8]} {Human: ENSG00000054523, KIF1B, kinesin family member 1B, [Score=442, Expect=7e-137]; ENSG00000130294, KIF1A, kinesin family member 1A, [Score=434, Expect=2e-130]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [RH, Score=611, Expect=0.0]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=431, Expect=4e-129]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [RH, Score=822, Expect=0.0]} {Smed: dd_Smed_v6_12573_0_1, dd_Smed_v6_12573_0_1, [Score=613, Expect=0.0]} {RNA1509_19365} {RNA1310_3322.1, RNA1509_19365} {RNA1509_19365, RNA815_1060} |
Cumulative graph for MligTC455_35204
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.392 | 3.177 | 0.18154 | 0.81017 | |
| RegionR2 | 2.723 | 3.177 | 0.00111 | 0.02353 | |
| RegionR3 | 2.086 | 3.177 | 0.00073 | 0.02334 | |
| RegionR4 | -1.169 | 3.177 | 0.15869 | 0.41478 | |
| RegionR5 | -0.407 | 3.177 | 0.52165 | 0.88456 | |
| RegionR6 | 0.727 | 3.177 | 0.25934 | 0.84716 | |
| RegionR7 | -1.842 | 3.177 | 0.07082 | 0.51164 | |
| RegionR8 | 0.274 | 3.177 | 0.76338 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.41 | 3.177 | 0.69724 | 1.00000 | |
| RegenerationR2 | 0.235 | 3.177 | 0.70431 | 0.95782 | |
| RegenerationR3 | -0.286 | 3.177 | 0.72493 | 0.95636 | |
| RegenerationR4 | 1.066 | 3.177 | 0.21148 | 0.65875 | |
| RegenerationR5 | 0.765 | 3.177 | 0.33030 | 0.75178 | |
| RegenerationR6 | 0.136 | 3.177 | 0.86356 | 1.00000 | |
| RegenerationBL | -0.65 | 3.177 | 0.63966 | 0.97842 | |
| RegenerationTP | -0.08 | 3.177 | 0.94145 | 1.00000 |
Genes with expression patterns similar to MligTC455_35204
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35204 | 280 | 5.84 | Mlig455_041604 | Neo: - Age: - Region-enriched R2: 2.723/0.02353 |
KIF1B | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_041604 {REF} {Length: 4878} {Pfam: Kinesin motor domain [PF00225.25, score=337.9]; Microtubule binding [PF16796.7, score=66.4]; Kinesin protein 1B [PF12423.10, score=37.7]; FHA domain [PF00498.28, score=29.8]; Kinesin-associated [PF16183.7, score=26.9]; First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=24.6]; XH domain [PF03469.16, score=19.8]} {Human: ENSG00000054523, KIF1B, kinesin family member 1B, [Score=442, Expect=7e-137]; ENSG00000130294, KIF1A, kinesin family member 1A, [Score=434, Expect=2e-130]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [RH, Score=611, Expect=0.0]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=431, Expect=4e-129]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [RH, Score=822, Expect=0.0]} {Smed: dd_Smed_v6_12573_0_1, dd_Smed_v6_12573_0_1, [Score=613, Expect=0.0]} {RNA1509_19365} {RNA1310_3322.1, RNA1509_19365} {RNA1509_19365, RNA815_1060} |
| 2. | MligTC455_42989 | 787 | 16.39 | Mlig455_030552 | Neo: - Age: logFC(26M/2M)=-0.246 Region-enriched R2: 2.140/0.02746 |
CFAP74 | 1.793 | - | - | 0.954 | - | - | 0.839 | Mlig455_030552 {REF} {Length: 5600} {Pfam: Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=74.3]; Flagellar-associated PapD-like [PF14874.8, score=32.4]; Transmembrane protein 131-like N-terminal [PF12371.10, score=26.4]; MSP (Major sperm protein) domain [PF00635.28, score=19.3]} {Human: ENSG00000142609, CFAP74, cilia and flagella associated protein 74, [RH, Score=666, Expect=0.0]} {Mouse: ENSMUSG00000078490, Cfap74, cilia and flagella associated protein 74, [RH, Score=695, Expect=0.0]} {Smed: dd_Smed_v6_18628_0_1, dd_Smed_v6_18628_0_1, [Score=419, Expect=2e-123]} {RNA1509_3207} {RNA1310_845.1, RNA1509_3207} {RNA1509_3207, RNA815_1379} |
| 3. | MligTC455_07653 | 93 | 1.94 | Mlig455_005690 | Neo: - Age: - Region-enriched R4: 3.056/0.03657 |
1.723 | - | 0.771 | 0.952 | - | - | - | Mlig455_005690 {REF} {Length: 747} {NoTransDecoderORF} {RNA1509_20118} {RNA1310_60500} {RNA815_43456} | |
| 4. | MligTC455_42992 | 850 | 17.72 | Mlig455_012830 | Neo: - Age: - Region-enriched R2: 1.532/0.00966 |
TCTEX1D1 | 1.702 | 0.749 | - | 0.953 | - | - | - | Mlig455_012830 {REF} {Length: 1216} {TRANSSPLICED} {Pfam: Tctex-1 family [PF03645.15, score=81.4]} {Human: ENSG00000152760, TCTEX1D1, Tctex1 domain containing 1, [RH, Score=143, Expect=2e-43]} {Mouse: ENSMUSG00000028523, Tctex1d1, Tctex1 domain containing 1, [RH, Score=138, Expect=2e-41]} {Dmel: FBgn0037773, CG5359, [Score=70.1, Expect=2e-15]} {Celegans: WBGene00008764, dylt-1, DYnein Light chain (Tctex type), [Score=50.8, Expect=8e-09]} {Smed: dd_Smed_v6_9321_0_2, dd_Smed_v6_9321_0_2, [RH, Score=172, Expect=3e-55]} {RNA1509_33819, RNA1509_50135} {RNA1310_32303, RNA1509_33819, RNA1509_50135} {RNA1509_33819, RNA1509_50135, RNA815_5483} |
| 5. | MligTC455_47266 | 419 | 8.74 | Mlig455_038314 | Neo: - Age: - |
1.668 | 0.710 | - | - | - | - | 0.958 | Mlig455_038314 {REF} {Length: 4191} {Smed: dd_Smed_v6_13864_0_1, dd_Smed_v6_13864_0_1, [Score=50.8, Expect=3e-06]} {RNA1509_14406} {RNA1310_2984.1} {RNA815_4808} | |
| 6. | MligTC455_47267 | 406 | 8.47 | Mlig455_050212 | Neo: - Age: - |
1.667 | 0.709 | - | - | - | - | 0.958 | Mlig455_050212 {REF} {Length: 2885} {RNA1509_14406} {RNA1310_2984.1} {RNA815_17514} | |
| 7. | MligTC455_18240 | 270 | 5.63 | Mlig455_029912 | Neo: - Age: - |
0.975 | - | - | - | - | - | 0.975 | Mlig455_029912 {REF} {Length: 1170} {RNA1509_2310} {RNA1310_2310} {RNA815_2485.1} | |
| 8. | MligTC455_02314 | 28 | 0.58 | Mlig455_059382 | Neo: - Age: - |
0.973 | - | - | 0.973 | - | - | - | Mlig455_059382 {REF} {Length: 161} {NoTransDecoderORF} {RNA1509_55144} {RNA1310_22958} {RNA815_59301} | |
| 9. | MligTC455_51052 | 19 | 0.39 | Mlig455_061528 | Neo: - Age: Up-Down-Up |
0.962 | - | - | 0.962 | - | - | - | Mlig455_061528 {REF} {Length: 1579} {RNA1310_32253} | |
| 10. | MligTC455_33044 | 734 | 15.3 | Mlig455_037188, Mlig455_052339 | Neo: - Age: logFC(26M/2M)=-0.337 |
RPGRIP1L | 0.96 | - | - | - | - | - | 0.960 | Mlig455_037188 {REF} {Length: 4884} {TRANSSPLICED} {Pfam: First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=146.0]; Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=71.1]; C2 domain [PF00168.32, score=28.5]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=369, Expect=5e-110]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=355, Expect=2e-105]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=337, Expect=1e-98]} {RNA1509_2695} {RNA1310_1383} {RNA815_371} Mlig455_052339 {REF} {Length: 4951} {TRANSSPLICED} {Pfam: First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=149.3]; Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=70.2]; C2 domain [PF00168.32, score=27.9]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [RH, Score=514, Expect=3e-159]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [RH, Score=499, Expect=7e-154]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [RH, Score=511, Expect=5e-158]} {RNA1509_2695, RNA1509_47268} {RNA1310_1383, RNA1509_2695, RNA1509_47268} {RNA1509_2695, RNA1509_47268, RNA815_371} |
| 11. | MligTC455_08759 | 30 | 0.63 | Mlig455_032267 | Neo: - Age: - |
0.959 | - | - | 0.959 | - | - | - | Mlig455_032267 {REF} {Length: 956} {Pfam: WSC domain [PF01822.21, score=47.4]; PAN domain [PF00024.28, score=25.3]} {RNA1310_49278} {RNA815_40649} | |
| 12. | MligTC455_38042 | 175 | 3.64 | Mlig455_032349 | Neo: - |
ANKRD28 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_032349 {REF} {Length: 2134} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=114.5]; Ankyrin repeats (many copies) [PF13637.8, score=79.6]; Ankyrin repeats (many copies) [PF13857.8, score=77.6]; Ankyrin repeat [PF00023.32, score=64.8]; Ankyrin repeat [PF13606.8, score=61.6]} {Human: ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=67.4, Expect=2e-11]; ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=65.9, Expect=2e-11]} {Mouse: ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=67.4, Expect=1e-11]} {Dmel: FBgn0039590, CG10011, [Score=61.2, Expect=9e-10]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=50.8, Expect=1e-06]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=58.9, Expect=2e-09]} {RNA1509_50870} {RNA1310_30962} {RNA815_23812} |
| 13. | MligTC455_17921 | 88 | 1.83 | Mlig455_056776 | Neo: - Age: - |
0.958 | - | - | 0.958 | - | - | - | Mlig455_056776 {REF} {Length: 264} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36476} {RNA1310_26491.2} {RNA815_8938.1} | |
| 14. | MligTC455_50975 | 173 | 3.6 | Mlig455_014388 | Neo: - Age: Down-Up-Up |
CHRNB3 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_014388 {REF} {Length: 1742} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=101.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=23.6]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=110, Expect=4e-26]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=108, Expect=2e-25]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=107, Expect=5e-25]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=106, Expect=9e-25]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=106, Expect=7e-25]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=105, Expect=2e-24]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=114, Expect=5e-28]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=107, Expect=2e-25]} {Celegans: WBGene00000955, des-2, Acetylcholine receptor subunit alpha-type des-2, [Score=104, Expect=2e-24]} {Smed: dd_Smed_v6_26232_0_1, dd_Smed_v6_26232_0_1, [Score=157, Expect=2e-43]} {RNA1310_54548} {RNA815_33490} |
| 15. | MligTC455_25808 | 419 | 8.73 | Mlig455_031559 | Neo: - Age: - |
ENDOV | 0.95 | - | - | - | - | 0.950 | - | Mlig455_031559 {REF} {Length: 2203} {Pfam: Endonuclease V [PF04493.16, score=203.3]} {Human: ENSG00000173818, ENDOV, endonuclease V, [RH, Score=202, Expect=9e-63]} {Mouse: ENSMUSG00000039850, Endov, endonuclease V, [RH, Score=207, Expect=4e-64]} {Celegans: WBGene00007464, C08H9.3, Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase, [Score=97.8, Expect=4e-22]} {Smed: dd_Smed_v6_9595_0_3, dd_Smed_v6_9595_0_3, [RH, Score=112, Expect=9e-29]} {RNA1509_46904} {RNA1310_32480} {RNA815_14313.1} |
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