Data search


search
Exact
Search

Results for MligTC455_02314

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_02314 28 0.58 Mlig455_059382

Neo: -

Age: -

Mlig455_059382 {REF} {Length: 161} {NoTransDecoderORF} {RNA1509_55144} {RNA1310_22958} {RNA815_59301}

Cumulative graph for MligTC455_02314

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.134 1.11 0.99978 1.00000
RegionR2 1.174 1.11 0.69455 1.00000
RegionR3 1.098 1.11 0.55947 1.00000
RegionR4 -0.191 1.11 0.99987 1.00000
RegionR5 -0.301 1.11 0.69856 1.00000
RegionR6 -1.613 1.11 0.99982 1.00000
RegionR7 0.145 1.11 0.69935 1.00000
RegionR8 -0.446 1.11 0.99984 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.837 1.11 1.00000 1.00000
RegenerationR2 1.179 1.11 0.60786 0.91888
RegenerationR3 0.907 1.11 0.81210 0.98567
RegenerationR4 2.553 1.11 0.31205 0.75190
RegenerationR5 2.361 1.11 0.46810 0.84104
RegenerationR6 2.171 1.11 0.44267 0.76577
RegenerationBL -1.566 1.11 0.99992 1.00000
RegenerationTP 0.752 1.11 0.80977 1.00000


Genes with expression patterns similar to MligTC455_02314

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_02314 28 0.58 Mlig455_059382

Neo: -

Age: -

3 - - 1.000 - 1.000 1.000 Mlig455_059382 {REF} {Length: 161} {NoTransDecoderORF} {RNA1509_55144} {RNA1310_22958} {RNA815_59301}
2. MligTC455_20602 62 1.29 Mlig455_056199

Neo: -

Age: -

2.481 - - 0.951 - 0.773 0.757 Mlig455_056199 {REF} {Length: 10481} {RNA1509_57278} {RNA1310_20677.2, RNA1509_57278} {RNA1509_57278, RNA815_10967.1}
3. MligTC455_47691 103 2.14 Mlig455_046561

Neo: -

Age: -

UBTD2 1.667 - - 0.707 - 0.960 - Mlig455_046561 {REF} {Length: 3785} {Pfam: Ubiquitin-binding domain [PF16455.7, score=121.7]; Ubiquitin family [PF00240.25, score=33.5]} {Human: ENSG00000168246, UBTD2, ubiquitin domain containing 2, [RH, Score=218, Expect=9e-71]} {Mouse: ENSMUSG00000044949, Ubtd2, ubiquitin domain containing 2, [RH, Score=219, Expect=2e-71]} {Dmel: FBgn0264712, CG1172, [RH, Score=194, Expect=2e-61]} {Smed: dd_Smed_v6_3009_0_1, dd_Smed_v6_3009_0_1, [RH, Score=198, Expect=4e-63]} {RNA1509_42408} {RNA1310_33971} {RNA815_34971}
4. MligTC455_08759 30 0.63 Mlig455_032267

Neo: -

Age: -

0.986 - - 0.986 - - - Mlig455_032267 {REF} {Length: 956} {Pfam: WSC domain [PF01822.21, score=47.4]; PAN domain [PF00024.28, score=25.3]} {RNA1310_49278} {RNA815_40649}
5. MligTC455_51052 19 0.39 Mlig455_061528

Neo: -

Age: Up-Down-Up

0.985 - - 0.985 - - - Mlig455_061528 {REF} {Length: 1579} {RNA1310_32253}
6. MligTC455_17921 88 1.83 Mlig455_056776

Neo: -

Age: -

0.982 - - 0.982 - - - Mlig455_056776 {REF} {Length: 264} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36476} {RNA1310_26491.2} {RNA815_8938.1}
7. MligTC455_35204 280 5.84 Mlig455_041604

Neo: -

Age: -

Region-enriched R2: 2.723/0.02353
Region-enriched R3: 2.086/0.02334

KIF1B 0.973 - - 0.973 - - - Mlig455_041604 {REF} {Length: 4878} {Pfam: Kinesin motor domain [PF00225.25, score=337.9]; Microtubule binding [PF16796.7, score=66.4]; Kinesin protein 1B [PF12423.10, score=37.7]; FHA domain [PF00498.28, score=29.8]; Kinesin-associated [PF16183.7, score=26.9]; First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=24.6]; XH domain [PF03469.16, score=19.8]} {Human: ENSG00000054523, KIF1B, kinesin family member 1B, [Score=442, Expect=7e-137]; ENSG00000130294, KIF1A, kinesin family member 1A, [Score=434, Expect=2e-130]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [RH, Score=611, Expect=0.0]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=431, Expect=4e-129]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [RH, Score=822, Expect=0.0]} {Smed: dd_Smed_v6_12573_0_1, dd_Smed_v6_12573_0_1, [Score=613, Expect=0.0]} {RNA1509_19365} {RNA1310_3322.1, RNA1509_19365} {RNA1509_19365, RNA815_1060}
8. MligTC455_35313 221 4.61 Mlig455_029361

Neo: -

Age: -

ENOX2 0.97 - - - - 0.970 - Mlig455_029361 {REF} {Length: 2176} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.7]} {Human: ENSG00000165675, ENOX2, ecto-NOX disulfide-thiol exchanger 2, [RH, Score=146, Expect=1e-36]} {Mouse: ENSMUSG00000022012, Enox1, ecto-NOX disulfide-thiol exchanger 1, [Score=145, Expect=2e-36]; ENSMUSG00000031109, Enox2, ecto-NOX disulfide-thiol exchanger 2, [Score=139, Expect=1e-34]} {Dmel: FBgn0036317, CG10948, [RH, Score=136, Expect=3e-33]} {RNA1509_30362} {RNA1310_16052.1} {RNA815_16734}
9. MligTC455_46403 73 1.53 Mlig455_020746

Neo: -

Age: -

0.963 - - - - 0.963 - Mlig455_020746 {REF} {Length: 668} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_47399.1} {RNA815_38310}
10. MligTC455_15367 110 2.3 Mlig455_067477, Mlig455_067486

Neo: -

Age: -

TCF23 0.962 - - 0.962 - - -

Mlig455_067477 {REF} {Length: 756} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=41.4]} {Human: ENSG00000163792, TCF23, transcription factor 23, [RH, Score=88.2, Expect=2e-22]} {Mouse: ENSMUSG00000006642, Tcf23, transcription factor 23, [RH, Score=85.9, Expect=1e-21]} {Dmel: FBgn0011277, HLH4C, Helix loop helix protein 4C, [Score=49.3, Expect=3e-08]} {Celegans: WBGene00001959, hlh-15, Helix Loop Helix, [Score=47.0, Expect=5e-08]} {Smed: dd_Smed_v6_16070_0_1, dd_Smed_v6_16070_0_1, [Score=52.8, Expect=1e-09]} {RNA1310_4676} {RNA815_18327.1}

Mlig455_067486 {REF} {Length: 273} {NoTransDecoderORF} {RNA1310_4676} {RNA815_18327.2}
11. MligTC455_41326 407 8.48 Mlig455_011060

Neo: -

Age: -

KCNA2 0.962 - - - - 0.962 - Mlig455_011060 {REF} {Length: 6096} {Pfam: Ion transport protein [PF00520.33, score=161.6]; BTB/POZ domain [PF02214.24, score=99.2]; Ion channel [PF07885.18, score=50.3]} {Human: ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [RH, Score=620, Expect=0.0]; ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [RH, Score=617, Expect=0.0]; ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [RH, Score=611, Expect=0.0]} {Mouse: ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [RH, Score=619, Expect=0.0]; ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [RH, Score=617, Expect=0.0]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [RH, Score=607, Expect=0.0]} {Dmel: FBgn0003380, Sh, Shaker, [RH, Score=643, Expect=0.0]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [RH, Score=383, Expect=6e-127]} {Smed: dd_Smed_v6_15425_0_1, dd_Smed_v6_15425_0_1, [RH, Score=715, Expect=0.0]} {RNA1509_19798} {RNA1310_8877, RNA1509_19798} {RNA1509_19798, RNA815_8082.1}
12. MligTC455_27317 21175 441.14 Mlig455_003976

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.379

CAV1 0.955 - - 0.955 - - - Mlig455_003976 {REF} {Length: 1759} {TRANSSPLICED} {Pfam: Caveolin [PF01146.19, score=129.4]} {Human: ENSG00000105974, CAV1, caveolin 1, [Score=108, Expect=1e-30]} {Mouse: ENSMUSG00000007655, Cav1, caveolin 1, caveolae protein, [Score=108, Expect=8e-31]} {Celegans: WBGene00000301, cav-1, Caveolin-1, [RH, Score=85.1, Expect=5e-21]} {Smed: dd_Smed_v6_8555_0_1, dd_Smed_v6_8555_0_1, [RH, Score=151, Expect=2e-48]} {RNA1509_21685} {RNA1310_44240} {RNA815_15431.2}
13. MligTC455_33397 359 7.48 Mlig455_055904, Mlig455_055950

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.310

DNAH1 0.954 - - 0.954 - - -

Mlig455_055904 {REF} {Length: 13390} {TRANSSPLICED} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=524.7]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=468.1]; Dynein heavy chain C-terminal domain [PF18199.3, score=397.3]; P-loop containing dynein motor region D4 [PF12780.9, score=335.8]; ATP-binding dynein motor region [PF12781.9, score=305.6]; P-loop containing dynein motor region [PF12775.9, score=271.0]; Microtubule-binding stalk of dynein motor [PF12777.9, score=165.6]; Dynein heavy chain AAA lid domain [PF18198.3, score=160.6]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=154.9]; Dynein heavy chain AAA lid domain [PF17852.3, score=107.6]; AAA+ lid domain [PF17857.3, score=77.1]; AAA domain (dynein-related subfamily) [PF07728.16, score=73.5]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=35.7]; AAA domain [PF13238.8, score=29.5]; AAA domain [PF13401.8, score=28.6]; AAA ATPase domain [PF13191.8, score=20.0]; Magnesium chelatase, subunit ChlI [PF01078.23, score=19.5]; DEAD/DEAH box helicase [PF00270.31, score=18.7]; Type III restriction enzyme, res subunit [PF04851.17, score=18.6]} {Human: ENSG00000114841, DNAH1, dynein axonemal heavy chain 1, [RH, Score=5442, Expect=0.0]} {Mouse: ENSMUSG00000019027, Dnah1, dynein, axonemal, heavy chain 1, [RH, Score=5425, Expect=0.0]} {Dmel: FBgn0013810, Dhc36C, Dynein heavy chain at 36C, [Score=2892, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1319, Expect=0.0]} {Smed: dd_Smed_v6_6790_0_1, dd_Smed_v6_6790_0_1, [RH, Score=4109, Expect=0.0]} {RNA1509_1216, RNA1509_2433, RNA1509_3292, RNA1509_37404} {RNA1310_62, RNA1509_1216, RNA1509_2433, RNA1509_3292, RNA1509_37404} {RNA1509_1216, RNA1509_2433, RNA1509_3292, RNA1509_37404, RNA815_116.1}

Mlig455_055950 {REF} {Length: 7914} {TRANSSPLICED} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=522.5]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=216.0]; Dynein heavy chain AAA lid domain [PF17852.3, score=109.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=37.1]; AAA domain [PF13238.8, score=27.9]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.2]; AAA domain [PF13401.8, score=19.7]} {Human: ENSG00000114841, DNAH1, dynein axonemal heavy chain 1, [Score=1202, Expect=0.0]} {Mouse: ENSMUSG00000019027, Dnah1, dynein, axonemal, heavy chain 1, [Score=1207, Expect=0.0]} {Dmel: FBgn0013810, Dhc36C, Dynein heavy chain at 36C, [Score=785, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=475, Expect=3e-136]} {Smed: dd_Smed_v6_13058_0_1, dd_Smed_v6_13058_0_1, [Score=1004, Expect=0.0]} {RNA1509_3292} {RNA1310_62} {RNA815_26.1}
14. MligTC455_34813 197 4.1 Mlig455_055694

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.386

INTS11 0.954 - - - - 0.954 - Mlig455_055694 {REF} {Length: 5906} {TRANSSPLICED} {Pfam: Beta-Casp domain [PF10996.10, score=92.4]; Metallo-beta-lactamase superfamily domain [PF16661.7, score=66.7]; Zn-dependent metallo-hydrolase RNA specificity domain [PF07521.14, score=59.3]; Metallo-beta-lactamase superfamily [PF00753.29, score=47.2]; Beta-lactamase superfamily domain [PF12706.9, score=36.2]} {Human: ENSG00000127054, INTS11, integrator complex subunit 11, [RH, Score=751, Expect=0.0]} {Mouse: ENSMUSG00000029034, Ints11, integrator complex subunit 11, [RH, Score=746, Expect=0.0]} {Dmel: FBgn0039691, IntS11, Integrator 11, [RH, Score=711, Expect=0.0]} {Celegans: WBGene00008642, F10B5.8, [RH, Score=663, Expect=0.0]} {Smed: dd_Smed_v6_10577_0_1, dd_Smed_v6_10577_0_1, [RH, Score=714, Expect=0.0]} {RNA1509_11563} {RNA1310_10198} {RNA815_3817}
15. MligTC455_43525 62 1.29 Mlig455_041078

Neo: -

Age: -

0.954 - - 0.954 - - - Mlig455_041078 {REF} {Length: 3896} {RNA1509_39963} {RNA1310_38466} {RNA815_23614}
16. MligTC455_42989 787 16.39 Mlig455_030552

Neo: -

Age: logFC(26M/2M)=-0.246

Region-enriched R2: 2.140/0.02746

CFAP74 0.953 - - 0.953 - - - Mlig455_030552 {REF} {Length: 5600} {Pfam: Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=74.3]; Flagellar-associated PapD-like [PF14874.8, score=32.4]; Transmembrane protein 131-like N-terminal [PF12371.10, score=26.4]; MSP (Major sperm protein) domain [PF00635.28, score=19.3]} {Human: ENSG00000142609, CFAP74, cilia and flagella associated protein 74, [RH, Score=666, Expect=0.0]} {Mouse: ENSMUSG00000078490, Cfap74, cilia and flagella associated protein 74, [RH, Score=695, Expect=0.0]} {Smed: dd_Smed_v6_18628_0_1, dd_Smed_v6_18628_0_1, [Score=419, Expect=2e-123]} {RNA1509_3207} {RNA1310_845.1, RNA1509_3207} {RNA1509_3207, RNA815_1379}
17. MligTC455_15887 275 5.74 Mlig455_014231, Mlig455_044928

Neo: Irradiation

Age: -

0.951 - - 0.951 - - -

Mlig455_014231 {REF} {Length: 3468} {TRANSSPLICED} {RNA1509_39956, RNA1509_46366} {RNA1310_5128.1, RNA1509_46366} {RNA1509_46366, RNA815_18027}

Mlig455_044928 {REF} {Length: 3268} {TRANSSPLICED} {RNA1509_39956} {RNA1310_5128.1} {RNA815_26969}
18. MligTC455_13406 43 0.9 Mlig455_023240

Neo: -

Age: -

0.95 - - 0.950 - - - Mlig455_023240 {REF} {Length: 908} {NoTransDecoderORF} {RNA1509_40851} {RNA1310_54245, RNA1509_40851} {RNA1509_40851, RNA815_32273}
19. MligTC455_22566 618 12.87 Mlig455_006547

Neo: -

Age: Up-Down-Down

Region-enriched R2: 2.644/0.01813

TRPM3 0.95 - - 0.950 - - - Mlig455_006547 {REF} {Length: 5791} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=96.5]; Ankyrin repeats (3 copies) [PF12796.9, score=81.0]; Ankyrin repeats (many copies) [PF13857.8, score=55.6]; Ankyrin repeat [PF13606.8, score=54.7]; Ankyrin repeat [PF00023.32, score=52.2]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=102, Expect=3e-21]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=102, Expect=3e-21]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=100, Expect=7e-21]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=63.5, Expect=1e-09]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=105, Expect=8e-23]} {RNA1509_11229, RNA1509_25684, RNA1509_37377} {RNA1310_987, RNA1509_25684, RNA1509_37377} {RNA1509_25684, RNA1509_37377, RNA815_3324}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA