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Results for MligTC455_35288

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_35288 733 15.28 Mlig455_027308

Neo: -

Age: -

 RNF13 Mlig455_027308 {REF} {Length: 3076} {TRANSSPLICED} {Pfam: RING-like zinc finger [PF17123.7, score=49.7]; Ring finger domain [PF13639.8, score=43.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=30.6]; PA domain [PF02225.24, score=29.7]; RING-type zinc-finger [PF13445.8, score=26.8]; RING-H2 zinc finger domain [PF12678.9, score=25.1]; zinc-RING finger domain [PF14634.8, score=24.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.7]; Prokaryotic RING finger family 4 [PF14447.8, score=19.8]} {Human: ENSG00000082996, RNF13, ring finger protein 13, [Score=186, Expect=9e-54]} {Mouse: ENSMUSG00000036503, Rnf13, ring finger protein 13, [Score=187, Expect=2e-54]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=147, Expect=1e-38]} {Celegans: WBGene00007666, C18B12.4, [Score=134, Expect=3e-34]} {Smed: dd_Smed_v6_5532_0_1, dd_Smed_v6_5532_0_1, [Score=91.7, Expect=1e-19]} {RNA1509_15779, RNA1509_28105, RNA1509_30799, RNA1509_41570, RNA1509_49765} {RNA1310_5556.2, RNA1509_15779, RNA1509_28105, RNA1509_30799, RNA1509_41570, RNA1509_49765} {RNA1509_15779, RNA1509_28105, RNA1509_30799, RNA1509_41570, RNA1509_49765, RNA815_14666}

Cumulative graph for MligTC455_35288

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.042 4.164 0.33324 0.97946
RegionR2 -0.463 4.164 0.35717 0.75159
RegionR3 0.695 4.164 0.06603 0.45319
RegionR4 1.095 4.164 0.01070 0.06418
RegionR5 0.642 4.164 0.07736 0.25569
RegionR6 0.471 4.164 0.24771 0.83371
RegionR7 -0.527 4.164 0.34135 0.97835
RegionR8 -0.872 4.164 0.21414 0.81863

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.886 4.164 0.60934 1.00000
RegenerationR2 0.009 4.164 0.98197 1.00000
RegenerationR3 0.253 4.164 0.55361 0.88567
RegenerationR4 0.124 4.164 0.77657 0.97912
RegenerationR5 0.348 4.164 0.38247 0.78818
RegenerationR6 0.46 4.164 0.28843 0.63853
RegenerationBL -0.701 4.164 0.25645 0.61362
RegenerationTP 0.057 4.164 0.92878 1.00000


Genes with expression patterns similar to MligTC455_35288

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_35288 733 15.28 Mlig455_027308

Neo: -

Age: -

 RNF13 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_027308 {REF} {Length: 3076} {TRANSSPLICED} {Pfam: RING-like zinc finger [PF17123.7, score=49.7]; Ring finger domain [PF13639.8, score=43.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=30.6]; PA domain [PF02225.24, score=29.7]; RING-type zinc-finger [PF13445.8, score=26.8]; RING-H2 zinc finger domain [PF12678.9, score=25.1]; zinc-RING finger domain [PF14634.8, score=24.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.7]; Prokaryotic RING finger family 4 [PF14447.8, score=19.8]} {Human: ENSG00000082996, RNF13, ring finger protein 13, [Score=186, Expect=9e-54]} {Mouse: ENSMUSG00000036503, Rnf13, ring finger protein 13, [Score=187, Expect=2e-54]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=147, Expect=1e-38]} {Celegans: WBGene00007666, C18B12.4, [Score=134, Expect=3e-34]} {Smed: dd_Smed_v6_5532_0_1, dd_Smed_v6_5532_0_1, [Score=91.7, Expect=1e-19]} {RNA1509_15779, RNA1509_28105, RNA1509_30799, RNA1509_41570, RNA1509_49765} {RNA1310_5556.2, RNA1509_15779, RNA1509_28105, RNA1509_30799, RNA1509_41570, RNA1509_49765} {RNA1509_15779, RNA1509_28105, RNA1509_30799, RNA1509_41570, RNA1509_49765, RNA815_14666}
2. MligTC455_47072 5414 112.8 Mlig455_040986, Mlig455_056402

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.255

Region-enriched R4: 1.608/0.00001

 TIMM13 0.962 - - - 0.962 - -

Mlig455_040986 {REF} {Length: 545} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=77.5]} {Human: ENSG00000099800, TIMM13, translocase of inner mitochondrial membrane 13, [RH, Score=88.2, Expect=9e-24]} {Mouse: ENSMUSG00000020219, Timm13, translocase of inner mitochondrial membrane 13, [RH, Score=89.4, Expect=2e-24]} {Dmel: FBgn0083968, CG34132, [RH, Score=95.9, Expect=3e-27]} {Smed: dd_Smed_v6_1516_0_1, dd_Smed_v6_1516_0_1, [RH, Score=79.7, Expect=6e-21]} {RNA1509_42171} {RNA1310_63309} {RNA815_33565}

Mlig455_056402 {REF} {Length: 545} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=77.5]} {Human: ENSG00000099800, TIMM13, translocase of inner mitochondrial membrane 13, [RH, Score=88.2, Expect=9e-24]} {Mouse: ENSMUSG00000020219, Timm13, translocase of inner mitochondrial membrane 13, [RH, Score=89.4, Expect=2e-24]} {Dmel: FBgn0083968, CG34132, [RH, Score=95.9, Expect=3e-27]} {Smed: dd_Smed_v6_1516_0_1, dd_Smed_v6_1516_0_1, [RH, Score=79.7, Expect=6e-21]} {RNA1509_18038, RNA1509_42171, RNA1509_4474} {RNA1310_63309, RNA1509_18038, RNA1509_42171, RNA1509_4474} {RNA1509_18038, RNA1509_42171, RNA1509_4474, RNA815_33565}
3. MligTC455_48047 314 6.55 Mlig455_018485

Neo: Irradiation

Age: Up-Down-Up

 0.962 - - 0.962 - - - Mlig455_018485 {REF} {Length: 3368} {TRANSSPLICED} {RNA1509_46828} {RNA1310_6402.1} {RNA815_12174}
4. MligTC455_49008 44 0.91 Mlig455_012310, Mlig455_012328

Neo: -

Age: -

 0.962 - - - - 0.962 -

Mlig455_012310 {REF} {Length: 2047} {TRANSSPLICED} {Pfam: Kyakuja-Dileera-Zisupton transposase [PF18758.3, score=72.9]} {RNA1310_56349} {RNA815_49596}

Mlig455_012328 {REF} {Length: 2514} {TRANSSPLICED} {RNA1310_56349} {RNA815_35712}
5. MligTC455_51021 564 11.75 Mlig455_042594, Mlig455_042637

Neo: -

Age: Down-Down-Up

 0.962 - - 0.962 - - -

Mlig455_042594 {REF} {Length: 4401} {Pfam: 7tm Chemosensory receptor [PF08395.14, score=35.9]; Trehalose receptor [PF06151.15, score=26.1]} {RNA1509_40597} {RNA1310_4044} {RNA815_20528}

Mlig455_042637 {REF} {Length: 3302} {Pfam: 7tm Chemosensory receptor [PF08395.14, score=37.7]; Trehalose receptor [PF06151.15, score=28.2]} {RNA1509_40597} {RNA1310_4044} {RNA815_20528}
6. MligTC455_42236 1269 26.44 Mlig455_046349

Neo: -

Age: -

Region-specific R4: 2.062

Region-enriched R4: 2.061/0.00000

 0.954 - - - 0.954 - - Mlig455_046349 {REF} {Length: 1216} {TRANSSPLICED} {Pfam: Mitochondrial and peroxisomal fission factor Mff [PF05644.13, score=64.3]} {RNA1509_20451} {RNA1310_22885} {RNA815_11405}
7. MligTC455_46759 1035 21.55 Mlig455_030405, Mlig455_069028

Neo: Int S/G2/M

Age: Down-Up-Up

 PBDC1 0.951 - - 0.951 - - -

Mlig455_030405 {REF} {Length: 1425} {TRANSSPLICED} {Pfam: Polysaccharide biosynthesis [PF04669.15, score=58.7]} {Human: ENSG00000102390, PBDC1, polysaccharide biosynthesis domain containing 1, [RH, Score=139, Expect=2e-41]} {Mouse: ENSMUSG00000031226, Pbdc1, polysaccharide biosynthesis domain containing 1, [RH, Score=140, Expect=2e-42]} {Dmel: FBgn0037087, CG7519, [RH, Score=132, Expect=6e-40]} {Celegans: WBGene00013200, Y54E5A.5, [RH, Score=125, Expect=2e-37]} {Smed: dd_Smed_v6_3346_0_1, dd_Smed_v6_3346_0_1, [RH, Score=135, Expect=3e-41]} {RNA1509_25210, RNA1509_25512} {RNA1310_34752, RNA1509_25512} {RNA1509_25512, RNA815_18689}

Mlig455_069028 {REF} {Length: 1421} {TRANSSPLICED} {Pfam: Polysaccharide biosynthesis [PF04669.15, score=58.7]} {Human: ENSG00000102390, PBDC1, polysaccharide biosynthesis domain containing 1, [RH, Score=139, Expect=2e-41]} {Mouse: ENSMUSG00000031226, Pbdc1, polysaccharide biosynthesis domain containing 1, [RH, Score=140, Expect=2e-42]} {Dmel: FBgn0037087, CG7519, [RH, Score=132, Expect=6e-40]} {Celegans: WBGene00013200, Y54E5A.5, [RH, Score=125, Expect=2e-37]} {Smed: dd_Smed_v6_3346_0_1, dd_Smed_v6_3346_0_1, [RH, Score=135, Expect=3e-41]} {RNA1509_25210} {RNA1310_34752, RNA1509_25210} {RNA1509_25210, RNA815_18689}
8. MligTC455_19932 461 9.61 Mlig455_019596, Mlig455_059100

Neo: -

Age: -

 0.95 - - 0.950 - - -

Mlig455_019596 {REF} {Length: 3118} {TRANSSPLICED} {RNA1509_20980} {RNA1310_30814.1} {RNA815_36360}

Mlig455_059100 {REF} {Length: 3656} {TRANSSPLICED} {RNA1509_20980, RNA1509_28513} {RNA1310_30814.1, RNA1509_28513} {RNA1509_28513, RNA815_36360}
9. MligTC455_53942 379 7.9 Mlig455_049460

Neo: -

Age: -

 ZDHHC17 0.95 - - - - 0.950 - Mlig455_049460 {REF} {Length: 3942} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=108.7]; Ankyrin repeats (many copies) [PF13637.8, score=100.7]; Ankyrin repeats (3 copies) [PF12796.9, score=97.6]; Ankyrin repeats (many copies) [PF13857.8, score=81.4]; Ankyrin repeat [PF13606.8, score=69.8]; Ankyrin repeat [PF00023.32, score=66.5]; Anti-sigma-K factor rskA [PF10099.11, score=19.2]} {Human: ENSG00000186908, ZDHHC17, zinc finger DHHC-type containing 17, [RH, Score=403, Expect=7e-132]} {Mouse: ENSMUSG00000035798, Zdhhc17, zinc finger, DHHC domain containing 17, [RH, Score=403, Expect=5e-132]} {Dmel: FBgn0259824, Hip14, Huntingtin-interacting protein 14, [RH, Score=369, Expect=5e-119]} {Celegans: WBGene00044071, dhhc-14, Palmitoyltransferase, [RH, Score=186, Expect=6e-51]} {Smed: dd_Smed_v6_2983_0_1, dd_Smed_v6_2983_0_1, [RH, Score=461, Expect=5e-155]} {RNA1509_10487, RNA1509_36027, RNA1509_52255, RNA1509_53627, RNA1509_57906, RNA1509_58938} {RNA1310_11376.1, RNA1509_36027, RNA1509_52255, RNA1509_53627, RNA1509_57906, RNA1509_58938} {RNA1509_36027, RNA1509_52255, RNA1509_53627, RNA1509_57906, RNA1509_58938, RNA815_8210}

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