TomoSeq data search

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Results for MligTC455_47072

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47072	5414	112.80	Mlig455_040986, Mlig455_056402	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.255 Region-enriched R4: 1.608/0.00001	TIMM13	Mlig455_040986 {REF} {Length: 545} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=77.5]} {Human: ENSG00000099800, TIMM13, translocase of inner mitochondrial membrane 13, [RH, Score=88.2, Expect=9e-24]} {Mouse: ENSMUSG00000020219, Timm13, translocase of inner mitochondrial membrane 13, [RH, Score=89.4, Expect=2e-24]} {Dmel: FBgn0083968, CG34132, [RH, Score=95.9, Expect=3e-27]} {Smed: dd_Smed_v6_1516_0_1, dd_Smed_v6_1516_0_1, [RH, Score=79.7, Expect=6e-21]} {RNA1509_42171} {RNA1310_63309} {RNA815_33565} Mlig455_056402 {REF} {Length: 545} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=77.5]} {Human: ENSG00000099800, TIMM13, translocase of inner mitochondrial membrane 13, [RH, Score=88.2, Expect=9e-24]} {Mouse: ENSMUSG00000020219, Timm13, translocase of inner mitochondrial membrane 13, [RH, Score=89.4, Expect=2e-24]} {Dmel: FBgn0083968, CG34132, [RH, Score=95.9, Expect=3e-27]} {Smed: dd_Smed_v6_1516_0_1, dd_Smed_v6_1516_0_1, [RH, Score=79.7, Expect=6e-21]} {RNA1509_18038, RNA1509_42171, RNA1509_4474} {RNA1310_63309, RNA1509_18038, RNA1509_42171, RNA1509_4474} {RNA1509_18038, RNA1509_42171, RNA1509_4474, RNA815_33565}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47072

5414

112.80

Mlig455_040986, Mlig455_056402

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.255

Region-enriched R4: 1.608/0.00001

TIMM13

Mlig455_040986 {REF} {Length: 545} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=77.5]} {Human: ENSG00000099800, TIMM13, translocase of inner mitochondrial membrane 13, [RH, Score=88.2, Expect=9e-24]} {Mouse: ENSMUSG00000020219, Timm13, translocase of inner mitochondrial membrane 13, [RH, Score=89.4, Expect=2e-24]} {Dmel: FBgn0083968, CG34132, [RH, Score=95.9, Expect=3e-27]} {Smed: dd_Smed_v6_1516_0_1, dd_Smed_v6_1516_0_1, [RH, Score=79.7, Expect=6e-21]} {RNA1509_42171} {RNA1310_63309} {RNA815_33565}

Mlig455_056402 {REF} {Length: 545} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=77.5]} {Human: ENSG00000099800, TIMM13, translocase of inner mitochondrial membrane 13, [RH, Score=88.2, Expect=9e-24]} {Mouse: ENSMUSG00000020219, Timm13, translocase of inner mitochondrial membrane 13, [RH, Score=89.4, Expect=2e-24]} {Dmel: FBgn0083968, CG34132, [RH, Score=95.9, Expect=3e-27]} {Smed: dd_Smed_v6_1516_0_1, dd_Smed_v6_1516_0_1, [RH, Score=79.7, Expect=6e-21]} {RNA1509_18038, RNA1509_42171, RNA1509_4474} {RNA1310_63309, RNA1509_18038, RNA1509_42171, RNA1509_4474} {RNA1509_18038, RNA1509_42171, RNA1509_4474, RNA815_33565}

Cumulative graph for MligTC455_47072

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.181	6.955	0.74187	1.00000
RegionR2	-0.841	6.955	0.00924	0.09587
RegionR3	0.016	6.955	0.95253	1.00000
RegionR4	1.608	6.955	0.00000	0.00001
RegionR5	0.529	6.955	0.03588	0.14728
RegionR6	0.124	6.955	0.63714	1.00000
RegionR7	-0.494	6.955	0.09818	0.59986
RegionR8	-1.122	6.955	0.00244	0.08446

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.376	6.955	0.62033	1.00000
RegenerationR2	-0.063	6.955	0.84235	1.00000
RegenerationR3	0.258	6.955	0.43720	0.82547
RegenerationR4	-0.2	6.955	0.55372	0.89380
RegenerationR5	0.257	6.955	0.42772	0.81653
RegenerationR6	0.151	6.955	0.64585	0.89638
RegenerationBL	0.345	6.955	0.28074	0.64196
RegenerationTP	0.212	6.955	0.56153	0.93965

Genes with expression patterns similar to MligTC455_47072

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47072	5414	112.8	Mlig455_040986, Mlig455_056402	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.255 Region-enriched R4: 1.608/0.00001	TIMM13	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_040986 {REF} {Length: 545} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=77.5]} {Human: ENSG00000099800, TIMM13, translocase of inner mitochondrial membrane 13, [RH, Score=88.2, Expect=9e-24]} {Mouse: ENSMUSG00000020219, Timm13, translocase of inner mitochondrial membrane 13, [RH, Score=89.4, Expect=2e-24]} {Dmel: FBgn0083968, CG34132, [RH, Score=95.9, Expect=3e-27]} {Smed: dd_Smed_v6_1516_0_1, dd_Smed_v6_1516_0_1, [RH, Score=79.7, Expect=6e-21]} {RNA1509_42171} {RNA1310_63309} {RNA815_33565} Mlig455_056402 {REF} {Length: 545} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=77.5]} {Human: ENSG00000099800, TIMM13, translocase of inner mitochondrial membrane 13, [RH, Score=88.2, Expect=9e-24]} {Mouse: ENSMUSG00000020219, Timm13, translocase of inner mitochondrial membrane 13, [RH, Score=89.4, Expect=2e-24]} {Dmel: FBgn0083968, CG34132, [RH, Score=95.9, Expect=3e-27]} {Smed: dd_Smed_v6_1516_0_1, dd_Smed_v6_1516_0_1, [RH, Score=79.7, Expect=6e-21]} {RNA1509_18038, RNA1509_42171, RNA1509_4474} {RNA1310_63309, RNA1509_18038, RNA1509_42171, RNA1509_4474} {RNA1509_18038, RNA1509_42171, RNA1509_4474, RNA815_33565}
2.	MligTC455_35288	733	15.28	Mlig455_027308	Neo: - Age: -	RNF13	0.962	-	-	-	0.962	-	-	Mlig455_027308 {REF} {Length: 3076} {TRANSSPLICED} {Pfam: RING-like zinc finger [PF17123.7, score=49.7]; Ring finger domain [PF13639.8, score=43.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=30.6]; PA domain [PF02225.24, score=29.7]; RING-type zinc-finger [PF13445.8, score=26.8]; RING-H2 zinc finger domain [PF12678.9, score=25.1]; zinc-RING finger domain [PF14634.8, score=24.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.7]; Prokaryotic RING finger family 4 [PF14447.8, score=19.8]} {Human: ENSG00000082996, RNF13, ring finger protein 13, [Score=186, Expect=9e-54]} {Mouse: ENSMUSG00000036503, Rnf13, ring finger protein 13, [Score=187, Expect=2e-54]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=147, Expect=1e-38]} {Celegans: WBGene00007666, C18B12.4, [Score=134, Expect=3e-34]} {Smed: dd_Smed_v6_5532_0_1, dd_Smed_v6_5532_0_1, [Score=91.7, Expect=1e-19]} {RNA1509_15779, RNA1509_28105, RNA1509_30799, RNA1509_41570, RNA1509_49765} {RNA1310_5556.2, RNA1509_15779, RNA1509_28105, RNA1509_30799, RNA1509_41570, RNA1509_49765} {RNA1509_15779, RNA1509_28105, RNA1509_30799, RNA1509_41570, RNA1509_49765, RNA815_14666}
3.	MligTC455_42553	3321	69.18	Mlig455_008710	Neo: Irradiation Age: - Region-enriched R5: 2.253/0.00001		0.954	-	-	-	-	0.954	-	Mlig455_008710 {REF} {Length: 3342} {Pfam: DDHD domain [PF02862.19, score=22.7]} {RNA1509_1273} {RNA1310_5765} {RNA815_4334.1}
4.	MligTC455_27845	85	1.76	Mlig455_037424	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_037424 {REF} {Length: 3156} {TRANSSPLICED} {RNA1509_9418} {RNA1310_2624} {RNA815_768.1}
5.	MligTC455_53555	841	17.51	Mlig455_069601	Neo: - Age: - Region-enriched R4: 2.089/0.00018	SLC25A12	0.95	-	-	-	0.950	-	-	Mlig455_069601 {REF} {Length: 4856} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=230.1]; EF hand [PF00036.34, score=44.5]; EF-hand domain pair [PF13499.8, score=41.9]; EF-hand domain pair [PF13833.8, score=38.5]; EF-hand domain [PF13405.8, score=38.4]; EF hand [PF13202.8, score=33.3]} {Human: ENSG00000115840, SLC25A12, solute carrier family 25 member 12, [RH, Score=760, Expect=0.0]; ENSG00000004864, SLC25A13, solute carrier family 25 member 13, [RH, Score=753, Expect=0.0]} {Mouse: ENSMUSG00000027010, Slc25a12, solute carrier family 25 (mitochondrial carrier, Aralar), member 12, [RH, Score=758, Expect=0.0]; ENSMUSG00000015112, Slc25a13, solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13, [RH, Score=756, Expect=0.0]} {Dmel: FBgn0028646, aralar1, [RH, Score=751, Expect=0.0]} {Celegans: WBGene00019326, K02F3.2, Probable calcium-binding mitochondrial carrier K02F3.2, [RH, Score=650, Expect=0.0]} {Smed: dd_Smed_v6_5641_0_2, dd_Smed_v6_5641_0_2, [RH, Score=828, Expect=0.0]} {RNA1509_2457} {RNA1310_9730} {RNA815_3698}