Data search
Results for MligTC455_35289
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35289 | 1254 | 26.13 | Mlig455_067473 | Neo: - Age: - Region-enriched R3: 1.618/0.02719 |
RNF13 | Mlig455_067473 {REF} {Length: 3073} {TRANSSPLICED} {Pfam: RING-like zinc finger [PF17123.7, score=49.6]; Ring finger domain [PF13639.8, score=43.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=30.6]; PA domain [PF02225.24, score=29.4]; RING-type zinc-finger [PF13445.8, score=26.9]; RING-H2 zinc finger domain [PF12678.9, score=25.1]; zinc-RING finger domain [PF14634.8, score=24.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.7]; Prokaryotic RING finger family 4 [PF14447.8, score=19.8]} {Human: ENSG00000082996, RNF13, ring finger protein 13, [Score=186, Expect=1e-53]} {Mouse: ENSMUSG00000036503, Rnf13, ring finger protein 13, [Score=187, Expect=2e-54]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=147, Expect=1e-38]} {Celegans: WBGene00007666, C18B12.4, [Score=136, Expect=4e-35]} {Smed: dd_Smed_v6_5532_0_1, dd_Smed_v6_5532_0_1, [Score=92.8, Expect=6e-20]} {RNA1509_20920} {RNA1310_5556.1, RNA1509_20920} {RNA1509_20920, RNA815_17094} |
Cumulative graph for MligTC455_35289
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.79 | 4.862 | 0.00532 | 0.22777 | |
| RegionR2 | 0.605 | 4.862 | 0.46388 | 0.85066 | |
| RegionR3 | 1.618 | 4.862 | 0.00089 | 0.02719 | |
| RegionR4 | 1.494 | 4.862 | 0.01046 | 0.06315 | |
| RegionR5 | 1.534 | 4.862 | 0.00146 | 0.01377 | |
| RegionR6 | 1.364 | 4.862 | 0.01346 | 0.20154 | |
| RegionR7 | 0.759 | 4.862 | 0.36173 | 0.99764 | |
| RegionR8 | 0.414 | 4.862 | 0.64895 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 8.724 | 4.862 | 0.00087 | 0.16348 | |
| RegenerationR2 | 0.361 | 4.862 | 0.21831 | 0.66558 | |
| RegenerationR3 | -0.316 | 4.862 | 0.29584 | 0.72711 | |
| RegenerationR4 | 0.217 | 4.862 | 0.49091 | 0.86521 | |
| RegenerationR5 | 0.275 | 4.862 | 0.32980 | 0.75178 | |
| RegenerationR6 | -0.037 | 4.862 | 0.90526 | 1.00000 | |
| RegenerationBL | -1.128 | 4.862 | 0.01946 | 0.15056 | |
| RegenerationTP | 0.368 | 4.862 | 0.41593 | 0.84113 |
Genes with expression patterns similar to MligTC455_35289
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35289 | 1254 | 26.13 | Mlig455_067473 | Neo: - Age: - Region-enriched R3: 1.618/0.02719 |
RNF13 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_067473 {REF} {Length: 3073} {TRANSSPLICED} {Pfam: RING-like zinc finger [PF17123.7, score=49.6]; Ring finger domain [PF13639.8, score=43.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=30.6]; PA domain [PF02225.24, score=29.4]; RING-type zinc-finger [PF13445.8, score=26.9]; RING-H2 zinc finger domain [PF12678.9, score=25.1]; zinc-RING finger domain [PF14634.8, score=24.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.7]; Prokaryotic RING finger family 4 [PF14447.8, score=19.8]} {Human: ENSG00000082996, RNF13, ring finger protein 13, [Score=186, Expect=1e-53]} {Mouse: ENSMUSG00000036503, Rnf13, ring finger protein 13, [Score=187, Expect=2e-54]} {Dmel: FBgn0037442, godzilla, godzilla E3 ubiquitin protein ligase, [Score=147, Expect=1e-38]} {Celegans: WBGene00007666, C18B12.4, [Score=136, Expect=4e-35]} {Smed: dd_Smed_v6_5532_0_1, dd_Smed_v6_5532_0_1, [Score=92.8, Expect=6e-20]} {RNA1509_20920} {RNA1310_5556.1, RNA1509_20920} {RNA1509_20920, RNA815_17094} |
| 2. | MligTC455_25691 | 646 | 13.46 | Mlig455_038164, Mlig455_038289 | Neo: - Age: Up-Up-Down |
WDR76 | 0.97 | - | - | - | - | 0.970 | - | Mlig455_038164 {REF} {Length: 4321} {Pfam: WD domain, G-beta repeat [PF00400.34, score=21.9]} {Human: ENSG00000092470, WDR76, WD repeat domain 76, [RH, Score=132, Expect=3e-32]} {Mouse: ENSMUSG00000027242, Wdr76, WD repeat domain 76, [RH, Score=145, Expect=5e-37]} {Dmel: FBgn0036354, Poc1, Proteome of centrioles 1, [Score=50.4, Expect=2e-06]} {RNA1509_15398, RNA1509_40318} {RNA1310_8982, RNA1509_15398} {RNA1509_15398, RNA815_5022} Mlig455_038289 {REF} {Length: 6507} {Pfam: WD domain, G-beta repeat [PF00400.34, score=22.0]} {Human: ENSG00000092470, WDR76, WD repeat domain 76, [RH, Score=132, Expect=3e-32]} {Mouse: ENSMUSG00000027242, Wdr76, WD repeat domain 76, [RH, Score=145, Expect=1e-36]} {Dmel: FBgn0036354, Poc1, Proteome of centrioles 1, [Score=50.4, Expect=3e-06]} {RNA1509_40318} {RNA1310_8982} {RNA815_5022} |
| 3. | MligTC455_51315 | 1114 | 23.22 | Mlig455_020350, Mlig455_041290, Mlig455_056193 | Neo: - Age: logFC(26M/2M)=0.223 Region-enriched R5: 1.138/0.04002 |
MOCS1 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_020350 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: Molybdenum Cofactor Synthesis C [PF06463.15, score=133.3]; Radical SAM superfamily [PF04055.23, score=102.6]; 4Fe-4S single cluster domain [PF13353.8, score=37.0]; 4Fe-4S single cluster domain [PF13394.8, score=23.8]} {Human: ENSG00000124615, MOCS1, molybdenum cofactor synthesis 1, [RH, Score=421, Expect=9e-147]} {Mouse: ENSMUSG00000064120, Mocs1, molybdenum cofactor synthesis 1, [RH, Score=422, Expect=2e-147]} {Dmel: FBgn0263241, Mocs1, Molybdenum cofactor synthesis 1, [RH, Score=385, Expect=5e-133]} {Celegans: WBGene00009885, F49E2.1, Molybdenum cofactor biosynthesis protein 1 GTP 3',8-cyclase Cyclic pyranopterin monophosphate synthase, [RH, Score=358, Expect=1e-122]} {Smed: dd_Smed_v6_15330_0_1, dd_Smed_v6_15330_0_1, [RH, Score=400, Expect=2e-139]} {RNA1509_4484} {RNA1310_11449.1, RNA1509_4484} {RNA1509_4484, RNA815_2106} Mlig455_041290 {REF} {Length: 2550} {TRANSSPLICED} {Pfam: Molybdenum Cofactor Synthesis C [PF06463.15, score=133.3]; Radical SAM superfamily [PF04055.23, score=102.6]; 4Fe-4S single cluster domain [PF13353.8, score=37.0]; 4Fe-4S single cluster domain [PF13394.8, score=23.8]} {Human: ENSG00000124615, MOCS1, molybdenum cofactor synthesis 1, [RH, Score=421, Expect=9e-147]} {Mouse: ENSMUSG00000064120, Mocs1, molybdenum cofactor synthesis 1, [RH, Score=422, Expect=2e-147]} {Dmel: FBgn0263241, Mocs1, Molybdenum cofactor synthesis 1, [RH, Score=385, Expect=5e-133]} {Celegans: WBGene00009885, F49E2.1, Molybdenum cofactor biosynthesis protein 1 GTP 3',8-cyclase Cyclic pyranopterin monophosphate synthase, [RH, Score=358, Expect=1e-122]} {Smed: dd_Smed_v6_15330_0_1, dd_Smed_v6_15330_0_1, [RH, Score=400, Expect=2e-139]} {RNA1509_4484} {RNA1310_11449.1} {RNA815_2106} Mlig455_056193 {REF} {Length: 2750} {TRANSSPLICED} {Pfam: Molybdenum Cofactor Synthesis C [PF06463.15, score=133.4]; Radical SAM superfamily [PF04055.23, score=102.7]; 4Fe-4S single cluster domain [PF13353.8, score=37.1]; 4Fe-4S single cluster domain [PF13394.8, score=23.9]} {Human: ENSG00000124615, MOCS1, molybdenum cofactor synthesis 1, [RH, Score=421, Expect=1e-146]} {Mouse: ENSMUSG00000064120, Mocs1, molybdenum cofactor synthesis 1, [RH, Score=421, Expect=4e-147]} {Dmel: FBgn0263241, Mocs1, Molybdenum cofactor synthesis 1, [RH, Score=384, Expect=8e-133]} {Celegans: WBGene00009885, F49E2.1, Molybdenum cofactor biosynthesis protein 1 GTP 3',8-cyclase Cyclic pyranopterin monophosphate synthase, [RH, Score=359, Expect=8e-123]} {Smed: dd_Smed_v6_15330_0_1, dd_Smed_v6_15330_0_1, [RH, Score=399, Expect=3e-139]} {RNA1509_40512, RNA1509_4484} {RNA1310_11449.1, RNA1509_40512} {RNA1509_40512, RNA815_2106} |
| 4. | MligTC455_25568 | 810 | 16.87 | Mlig455_002849 | Neo: - Age: - |
ABI1 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_002849 {REF} {Length: 2683} {TRANSSPLICED} {Pfam: Abl-interactor HHR [PF07815.16, score=56.0]; Variant SH3 domain [PF14604.8, score=50.2]; SH3 domain [PF00018.30, score=46.9]; Variant SH3 domain [PF07653.19, score=41.1]} {Human: ENSG00000136754, ABI1, abl interactor 1, [Score=196, Expect=1e-57]} {Mouse: ENSMUSG00000058835, Abi1, abl-interactor 1, [Score=201, Expect=3e-60]} {Dmel: FBgn0020510, Abi, Abelson interacting protein, [Score=107, Expect=6e-25]} {Celegans: WBGene00015146, abi-1, ABl Interactor homolog, [Score=119, Expect=2e-29]} {Smed: dd_Smed_v6_987_0_1, dd_Smed_v6_987_0_1, [RH, Score=104, Expect=3e-25]} {RNA1509_11629, RNA1509_24091, RNA1509_38731, RNA1509_44493} {RNA1310_22773, RNA1509_11629, RNA1509_24091, RNA1509_38731, RNA1509_44493} {RNA1509_11629, RNA1509_24091, RNA1509_38731, RNA1509_44493, RNA815_20107.1} |
| 5. | MligTC455_24955 | 868 | 18.09 | Mlig455_000650 | Neo: - Age: - Region-enriched R4: 1.432/0.02098 |
RTF1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_000650 {REF} {Length: 3574} {TRANSSPLICED} {Pfam: Plus-3 domain [PF03126.20, score=117.6]} {Human: ENSG00000137815, RTF1, RTF1 homolog, Paf1/RNA polymerase II complex component, [RH, Score=134, Expect=8e-36]} {Mouse: ENSMUSG00000027304, Rtf1, RTF1, Paf1/RNA polymerase II complex component, [RH, Score=314, Expect=1e-96]} {Dmel: FBgn0051702, CG31702, [RH, Score=102, Expect=7e-23]} {Smed: dd_Smed_v6_4360_0_1, dd_Smed_v6_4360_0_1, [RH, Score=256, Expect=2e-76]} {RNA1509_4448} {RNA1310_11147.2, RNA1509_4448} {RNA1509_4448, RNA815_1145} |
| 6. | MligTC455_39967 | 921 | 19.18 | Mlig455_062912 | Neo: - Age: - Region-enriched R3: 1.504/0.00003 Regeneration-upregulated R6: 1.477 Regeneration-enriched R6: 1.477 |
STX6 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_062912 {REF} {Length: 1682} {TRANSSPLICED} {Pfam: Syntaxin 6, N-terminal [PF09177.13, score=46.8]} {Human: ENSG00000135823, STX6, syntaxin 6, [Score=49.7, Expect=1e-06]} {Mouse: ENSMUSG00000026470, Stx6, syntaxin 6, [Score=52.8, Expect=6e-08]} {RNA1509_18796, RNA1509_20721, RNA1509_27073} {RNA1310_18720, RNA1509_18796, RNA1509_20721, RNA1509_27073} {RNA1509_18796, RNA1509_20721, RNA1509_27073, RNA815_22271} |
| 7. | MligTC455_17408 | 421 | 8.78 | Mlig455_012190 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.351 Region-enriched R4: 3.528/0.00000 |
TMEM56 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_012190 {REF} {Length: 1503} {TRANSSPLICED} {Pfam: TLC domain [PF03798.18, score=83.5]} {Human: ENSG00000152078, TMEM56, transmembrane protein 56, [RH, Score=87.4, Expect=8e-20]} {Mouse: ENSMUSG00000028132, Tmem56, transmembrane protein 56, [Score=100, Expect=9e-25]} {Smed: dd_Smed_v6_10262_0_1, dd_Smed_v6_10262_0_1, [Score=84.0, Expect=1e-18]} {RNA1509_23853, RNA1509_52773, RNA1509_58140} {RNA1310_7508, RNA1509_52773, RNA1509_58140} {RNA1509_52773, RNA1509_58140, RNA815_176.1} |
| 8. | MligTC455_20718 | 632 | 13.17 | Mlig455_024599 | Neo: - Age: - |
MARCH6 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_024599 {REF} {Length: 3922} {TRANSSPLICED} {Pfam: RING-variant domain [PF12906.9, score=54.3]} {Human: ENSG00000145495, MARCH6, membrane associated ring-CH-type finger 6, [RH, Score=441, Expect=8e-140]} {Mouse: ENSMUSG00000039100, March6, membrane-associated ring finger (C3HC4) 6, [RH, Score=447, Expect=3e-142]} {Dmel: FBgn0035333, CG1317, [RH, Score=171, Expect=2e-43]} {Celegans: WBGene00018847, marc-6, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [RH, Score=221, Expect=2e-59]} {Smed: dd_Smed_v6_4584_0_1, dd_Smed_v6_4584_0_1, [RH, Score=374, Expect=7e-115]} {RNA1509_37473, RNA1509_50909, RNA1509_8006} {RNA1310_5490, RNA1509_37473, RNA1509_50909, RNA1509_8006} {RNA1509_37473, RNA1509_50909, RNA1509_8006, RNA815_7121} |