Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_35313 | 221 | 4.61 | Mlig455_029361 | Neo: - Age: - |
ENOX2 | Mlig455_029361 {REF} {Length: 2176} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.7]} {Human: ENSG00000165675, ENOX2, ecto-NOX disulfide-thiol exchanger 2, [RH, Score=146, Expect=1e-36]} {Mouse: ENSMUSG00000022012, Enox1, ecto-NOX disulfide-thiol exchanger 1, [Score=145, Expect=2e-36]; ENSMUSG00000031109, Enox2, ecto-NOX disulfide-thiol exchanger 2, [Score=139, Expect=1e-34]} {Dmel: FBgn0036317, CG10948, [RH, Score=136, Expect=3e-33]} {RNA1509_30362} {RNA1310_16052.1} {RNA815_16734} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -5.184 | 2.837 | 0.25683 | 0.90487 | |
RegionR2 | 0.797 | 2.837 | 0.43247 | 0.82280 | |
RegionR3 | -0.456 | 2.837 | 0.95161 | 1.00000 | |
RegionR4 | 0.864 | 2.837 | 0.36328 | 0.68656 | |
RegionR5 | 1.158 | 2.837 | 0.12096 | 0.34844 | |
RegionR6 | -0.021 | 2.837 | 0.86061 | 1.00000 | |
RegionR7 | 0.796 | 2.837 | 0.47879 | 1.00000 | |
RegionR8 | 2.046 | 2.837 | 0.06601 | 0.49522 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -0.839 | 2.837 | 0.99991 | 1.00000 | |
RegenerationR2 | 0.827 | 2.837 | 0.08073 | 0.45741 | |
RegenerationR3 | 0.223 | 2.837 | 0.73733 | 0.95982 | |
RegenerationR4 | -0.532 | 2.837 | 0.37318 | 0.79610 | |
RegenerationR5 | 0.021 | 2.837 | 0.97329 | 1.00000 | |
RegenerationR6 | 0.457 | 2.837 | 0.47381 | 0.78718 | |
RegenerationBL | -1.979 | 2.837 | 0.04866 | 0.25316 | |
RegenerationTP | -0.853 | 2.837 | 0.30974 | 0.75446 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_35313 | 221 | 4.61 | Mlig455_029361 | Neo: - Age: - |
ENOX2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_029361 {REF} {Length: 2176} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.7]} {Human: ENSG00000165675, ENOX2, ecto-NOX disulfide-thiol exchanger 2, [RH, Score=146, Expect=1e-36]} {Mouse: ENSMUSG00000022012, Enox1, ecto-NOX disulfide-thiol exchanger 1, [Score=145, Expect=2e-36]; ENSMUSG00000031109, Enox2, ecto-NOX disulfide-thiol exchanger 2, [Score=139, Expect=1e-34]} {Dmel: FBgn0036317, CG10948, [RH, Score=136, Expect=3e-33]} {RNA1509_30362} {RNA1310_16052.1} {RNA815_16734} |
2. | MligTC455_15343 | 177 | 3.68 | Mlig455_028996 | Neo: - Age: - Region-enriched R8: 3.572/0.01201 |
PRKG1 | 2.607 | 0.907 | - | - | - | 0.950 | 0.750 | Mlig455_028996 {REF} {Length: 3220} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=128.3]; Protein kinase domain [PF00069.27, score=57.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=32.8]} {Human: ENSG00000185532, PRKG1, protein kinase cGMP-dependent 1, [Score=274, Expect=2e-81]} {Mouse: ENSMUSG00000052920, Prkg1, protein kinase, cGMP-dependent, type I, [Score=273, Expect=3e-81]} {Dmel: FBgn0000721, for, foraging, [Score=286, Expect=7e-86]} {Celegans: WBGene00001173, egl-4, cGMP-dependent protein kinase egl-4, [Score=244, Expect=7e-73]} {Smed: dd_Smed_v6_16434_0_1, dd_Smed_v6_16434_0_1, [Score=326, Expect=8e-100]} {RNA1509_32231} {RNA1310_18553.1} {RNA815_13824} |
3. | MligTC455_28542 | 341 | 7.11 | Mlig455_002557 | Neo: - Age: - |
TTLL6 | 1.83 | - | - | - | 0.956 | 0.874 | - | Mlig455_002557 {REF} {Length: 3148} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=274.4]; YheC/D like ATP-grasp [PF14398.8, score=23.0]; Sugar-transfer associated ATP-grasp [PF14397.8, score=21.0]} {Human: ENSG00000170703, TTLL6, tubulin tyrosine ligase like 6, [RH, Score=520, Expect=1e-170]} {Mouse: ENSMUSG00000045467, Ttll13, tubulin tyrosine ligase-like family, member 13, [RH, Score=560, Expect=0.0]; ENSMUSG00000038756, Ttll6, tubulin tyrosine ligase-like family, member 6, [RH, Score=534, Expect=4e-177]} {Dmel: FBgn0039501, CG5987, [RH, Score=453, Expect=2e-147]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=223, Expect=6e-62]} {Smed: dd_Smed_v6_8131_0_1, dd_Smed_v6_8131_0_1, [Score=682, Expect=0.0]} {RNA1509_19350} {RNA1310_5550.1} {RNA815_3974} |
4. | MligTC455_34813 | 197 | 4.1 | Mlig455_055694 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.386 |
INTS11 | 1.688 | - | - | - | - | 0.959 | 0.729 | Mlig455_055694 {REF} {Length: 5906} {TRANSSPLICED} {Pfam: Beta-Casp domain [PF10996.10, score=92.4]; Metallo-beta-lactamase superfamily domain [PF16661.7, score=66.7]; Zn-dependent metallo-hydrolase RNA specificity domain [PF07521.14, score=59.3]; Metallo-beta-lactamase superfamily [PF00753.29, score=47.2]; Beta-lactamase superfamily domain [PF12706.9, score=36.2]} {Human: ENSG00000127054, INTS11, integrator complex subunit 11, [RH, Score=751, Expect=0.0]} {Mouse: ENSMUSG00000029034, Ints11, integrator complex subunit 11, [RH, Score=746, Expect=0.0]} {Dmel: FBgn0039691, IntS11, Integrator 11, [RH, Score=711, Expect=0.0]} {Celegans: WBGene00008642, F10B5.8, [RH, Score=663, Expect=0.0]} {Smed: dd_Smed_v6_10577_0_1, dd_Smed_v6_10577_0_1, [RH, Score=714, Expect=0.0]} {RNA1509_11563} {RNA1310_10198} {RNA815_3817} |
5. | MligTC455_53434 | 3228 | 67.25 | Mlig455_028543 | Neo: - Age: logFC(26M/2M)=-0.260 |
RSPH4A | 1.68 | - | - | - | 0.960 | 0.720 | - | Mlig455_028543 {REF} {Length: 2028} {TRANSSPLICED} {Pfam: Radial spokehead-like protein [PF04712.14, score=618.3]} {Human: ENSG00000111834, RSPH4A, radial spoke head component 4A, [RH, Score=441, Expect=1e-147]} {Mouse: ENSMUSG00000039552, Rsph4a, radial spoke head 4 homolog A (Chlamydomonas), [Score=447, Expect=6e-150]} {Dmel: FBgn0034957, CG3121, [Score=227, Expect=6e-66]} {Smed: dd_Smed_v6_5346_0_1, dd_Smed_v6_5346_0_1, [RH, Score=456, Expect=2e-156]} {RNA1509_18862, RNA1509_6840, RNA1509_800} {RNA1310_12717.1, RNA1509_18862, RNA1509_6840, RNA1509_800} {RNA1509_18862, RNA1509_6840, RNA1509_800, RNA815_4800.1} |
6. | MligTC455_24001 | 531 | 11.07 | Mlig455_036318 | Neo: - Age: Up-Down-Down |
DNAH3 | 1.663 | - | - | - | 0.961 | 0.702 | - | Mlig455_036318 {REF} {Length: 13102} {TRANSSPLICED} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=527.0]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=479.4]; Dynein heavy chain C-terminal domain [PF18199.3, score=409.8]; P-loop containing dynein motor region D4 [PF12780.9, score=366.0]; ATP-binding dynein motor region [PF12781.9, score=303.3]; P-loop containing dynein motor region [PF12775.9, score=274.8]; Dynein heavy chain AAA lid domain [PF18198.3, score=187.8]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=157.6]; Dynein heavy chain AAA lid domain [PF17852.3, score=124.6]; Microtubule-binding stalk of dynein motor [PF12777.9, score=124.5]; AAA+ lid domain [PF17857.3, score=66.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=64.9]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=29.9]; AAA ATPase domain [PF13191.8, score=20.6]; RNA helicase [PF00910.24, score=20.1]} {Human: ENSG00000158486, DNAH3, dynein axonemal heavy chain 3, [RH, Score=5014, Expect=0.0]} {Mouse: ENSMUSG00000052273, Dnah3, dynein, axonemal, heavy chain 3, [RH, Score=5030, Expect=0.0]} {Dmel: FBgn0035581, Dnah3, dynein, axonemal, heavy chain 3, [RH, Score=3534, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=699, Expect=0.0]} {Smed: dd_Smed_v6_6941_0_1, dd_Smed_v6_6941_0_1, [Score=3807, Expect=0.0]} {RNA1509_389} {RNA1310_53.1} {RNA815_33.1} |
7. | MligTC455_02314 | 28 | 0.58 | Mlig455_059382 | Neo: - Age: - |
0.97 | - | - | - | - | 0.970 | - | Mlig455_059382 {REF} {Length: 161} {NoTransDecoderORF} {RNA1509_55144} {RNA1310_22958} {RNA815_59301} | |
8. | MligTC455_09427 | 51 | 1.05 | Mlig455_024323 | Neo: - Age: - |
0.97 | - | - | - | 0.970 | - | - | Mlig455_024323 {REF} {Length: 1791} {RNA1509_52019} {RNA1310_40479} {RNA815_16926} | |
9. | MligTC455_22690 | 210 | 4.38 | Mlig455_053928 | Neo: - Age: - Region-enriched R2: 4.103/0.01094 |
FOXJ1 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_053928 {REF} {Length: 2713} {TRANSSPLICED} {Pfam: Forkhead domain [PF00250.20, score=97.2]} {Human: ENSG00000129654, FOXJ1, forkhead box J1, [Score=111, Expect=3e-26]} {Mouse: ENSMUSG00000034227, Foxj1, forkhead box J1, [Score=111, Expect=3e-26]} {Dmel: FBgn0052006, CG32006, [RH, Score=82.0, Expect=2e-16]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=79.7, Expect=1e-16]} {Smed: dd_Smed_v6_10152_0_1, dd_Smed_v6_10152_0_1, [RH, Score=130, Expect=1e-32]} {RNA1509_3568} {RNA1310_17231.1} {RNA815_23261} |
10. | MligTC455_34652 | 480 | 9.99 | Mlig455_052267 | Neo: - Age: - |
PIR | 0.965 | - | - | - | - | - | 0.965 | Mlig455_052267 {REF} {Length: 4315} {Pfam: Pirin [PF02678.18, score=83.0]; Pirin C-terminal cupin domain [PF05726.15, score=65.0]} {Human: ENSG00000087842, PIR, pirin, [Score=155, Expect=3e-44]} {Mouse: ENSMUSG00000031379, Pir, pirin, [Score=153, Expect=8e-44]} {RNA1509_21229, RNA1509_33764, RNA1509_39162, RNA1509_39533, RNA1509_46794, RNA1509_56878} {RNA1310_24042, RNA1509_33764, RNA1509_39162, RNA1509_39533, RNA1509_46794, RNA1509_56878} {RNA1509_33764, RNA1509_39162, RNA1509_39533, RNA1509_46794, RNA1509_56878, RNA815_11615} |
11. | MligTC455_36892 | 196 | 4.09 | Mlig455_014059 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_014059 {REF} {Length: 1934} {RNA1509_56729} {RNA1310_13361} {RNA815_23265} | |
12. | MligTC455_51874 | 179 | 3.72 | Mlig455_009760 | Neo: - Age: - |
INTS1 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_009760 {REF} {Length: 7843} {Pfam: Protein of unknown function (DUF3677) [PF12432.10, score=62.3]} {Human: ENSG00000164880, INTS1, integrator complex subunit 1, [RH, Score=412, Expect=1e-115]} {Mouse: ENSMUSG00000029547, Ints1, integrator complex subunit 1, [RH, Score=410, Expect=2e-115]} {Dmel: FBgn0034964, IntS1, Integrator 1, [RH, Score=348, Expect=3e-96]} {Celegans: WBGene00015499, inst-1, INtegrator complex SubuniT 1 homolog, [RH, Score=71.6, Expect=6e-12]} {Smed: dd_Smed_v6_2322_0_2, dd_Smed_v6_2322_0_2, [RH, Score=158, Expect=1e-38]} {RNA1509_5844} {RNA1310_413.1, RNA1509_5844} {RNA1509_5844, RNA815_1627} |