Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_35438 | 118 | 2.46 | Mlig455_049789 | Neo: - Age: - |
QDPR | Mlig455_049789 {REF} {Length: 2364} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=60.2]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=35.7]; short chain dehydrogenase [PF00106.27, score=33.3]; NAD dependent epimerase/dehydratase family [PF01370.23, score=20.4]} {Human: ENSG00000151552, QDPR, quinoid dihydropteridine reductase, [Score=246, Expect=6e-77]} {Mouse: ENSMUSG00000015806, Qdpr, quinoid dihydropteridine reductase, [Score=248, Expect=8e-78]} {Dmel: FBgn0035964, Dhpr, Dihydropteridine reductase, [RH, Score=226, Expect=1e-69]} {Celegans: WBGene00011398, qdpr-1, Quinoid DihydroPteridine Reductase, [Score=226, Expect=8e-70]} {Smed: dd_Smed_v6_2408_0_1, dd_Smed_v6_2408_0_1, [RH, Score=203, Expect=2e-61]} {RNA1509_19705, RNA1509_48132} {RNA1310_19924, RNA1509_19705, RNA1509_48132} {RNA1509_19705, RNA1509_48132, RNA815_8952} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -5.414 | 2.274 | 0.24996 | 0.89636 | |
RegionR2 | 1.373 | 2.274 | 0.24743 | 0.62504 | |
RegionR3 | 1.25 | 2.274 | 0.18921 | 0.72535 | |
RegionR4 | 0.073 | 2.274 | 0.83213 | 1.00000 | |
RegionR5 | 0.966 | 2.274 | 0.29963 | 0.63486 | |
RegionR6 | 1.004 | 2.274 | 0.31646 | 0.90429 | |
RegionR7 | 1.279 | 2.274 | 0.31157 | 0.94548 | |
RegionR8 | -0.531 | 2.274 | 0.96428 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 0.795 | 2.274 | 0.99984 | 1.00000 | |
RegenerationR2 | -1.367 | 2.274 | 0.09880 | 0.49722 | |
RegenerationR3 | -0.405 | 2.274 | 0.60497 | 0.91001 | |
RegenerationR4 | -0.519 | 2.274 | 0.53932 | 0.88828 | |
RegenerationR5 | -0.168 | 2.274 | 0.80295 | 0.98914 | |
RegenerationR6 | 1.258 | 2.274 | 0.08911 | 0.37229 | |
RegenerationBL | -0.391 | 2.274 | 0.76922 | 1.00000 | |
RegenerationTP | 0.797 | 2.274 | 0.54448 | 0.92959 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_35438 | 118 | 2.46 | Mlig455_049789 | Neo: - Age: - |
QDPR | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049789 {REF} {Length: 2364} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=60.2]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=35.7]; short chain dehydrogenase [PF00106.27, score=33.3]; NAD dependent epimerase/dehydratase family [PF01370.23, score=20.4]} {Human: ENSG00000151552, QDPR, quinoid dihydropteridine reductase, [Score=246, Expect=6e-77]} {Mouse: ENSMUSG00000015806, Qdpr, quinoid dihydropteridine reductase, [Score=248, Expect=8e-78]} {Dmel: FBgn0035964, Dhpr, Dihydropteridine reductase, [RH, Score=226, Expect=1e-69]} {Celegans: WBGene00011398, qdpr-1, Quinoid DihydroPteridine Reductase, [Score=226, Expect=8e-70]} {Smed: dd_Smed_v6_2408_0_1, dd_Smed_v6_2408_0_1, [RH, Score=203, Expect=2e-61]} {RNA1509_19705, RNA1509_48132} {RNA1310_19924, RNA1509_19705, RNA1509_48132} {RNA1509_19705, RNA1509_48132, RNA815_8952} |
2. | MligTC455_44946 | 83 | 1.73 | Mlig455_046261, Mlig455_066038 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 5.905/0.02618 |
POLQ, PRR9 | 1.719 | - | - | 0.958 | - | 0.761 | - | Mlig455_046261 {REF} {Length: 9223} {TRANSSPLICED} {Pfam: DNA polymerase family A [PF00476.22, score=307.8]; Helicase conserved C-terminal domain [PF00271.33, score=41.2]; DEAD/DEAH box helicase [PF00270.31, score=22.4]} {Human: ENSG00000051341, POLQ, DNA polymerase theta, [RH, Score=610, Expect=5e-178]} {Mouse: ENSMUSG00000034206, Polq, polymerase (DNA directed), theta, [RH, Score=613, Expect=2e-179]} {Dmel: FBgn0002905, mus308, mutagen-sensitive 308, [RH, Score=575, Expect=7e-169]} {Celegans: WBGene00020964, polq-1, DNA polymerase theta, [RH, Score=308, Expect=3e-84]} {Smed: dd_Smed_v6_51730_0_3, dd_Smed_v6_51730_0_3, [RH, Score=253, Expect=8e-76]} {RNA1509_38802} {RNA1310_1092} {RNA815_20127} Mlig455_066038 {REF} {Length: 1082} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=42.4, Expect=1e-05]} {RNA1310_62396} |
3. | MligTC455_40821 | 347 | 7.22 | Mlig455_016792 | Neo: - |
0.982 | - | - | - | 0.982 | - | - | Mlig455_016792 {REF} {Length: 1267} {TRANSSPLICED} {Pfam: Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=48.2]; short chain dehydrogenase [PF00106.27, score=38.4]} {Dmel: FBgn0030968, CG7322, [Score=52.4, Expect=3e-08]} {Celegans: WBGene00000984, dhs-21, L-xylulose reductase, [Score=51.6, Expect=4e-08]} {RNA1509_44109} {RNA1310_24446.1} {RNA815_13838} | |
4. | MligTC455_36233 | 477 | 9.93 | Mlig455_034713, Mlig455_067592 | Neo: - |
HCK | 0.97 | - | - | - | 0.970 | - | - | Mlig455_034713 {REF} {Length: 2484} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=286.1]; Protein kinase domain [PF00069.27, score=164.1]; SH2 domain [PF00017.26, score=31.9]; Variant SH3 domain [PF14604.8, score=26.6]; Haspin like kinase domain [PF12330.10, score=26.5]; ABC1 atypical kinase-like domain [PF03109.18, score=23.6]; SH3 domain [PF00018.30, score=20.1]} {Human: ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=340, Expect=2e-111]; ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=333, Expect=5e-109]; ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=333, Expect=3e-108]; ENSG00000176105, YES1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=330, Expect=3e-107]} {Mouse: ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=336, Expect=6e-110]; ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=333, Expect=2e-108]; ENSMUSG00000014932, Yes1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=332, Expect=3e-108]; ENSMUSG00000003283, Hck, hemopoietic cell kinase, [Score=330, Expect=1e-107]; ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [Score=325, Expect=3e-106]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=308, Expect=2e-99]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=333, Expect=1e-109]} {Smed: dd_Smed_v6_3147_0_1, dd_Smed_v6_3147_0_1, [Score=378, Expect=1e-126]} {RNA1509_12794} {RNA1310_15672} {RNA815_6298} Mlig455_067592 {REF} {Length: 2530} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=285.9]; Protein kinase domain [PF00069.27, score=163.9]; Variant SH3 domain [PF14604.8, score=40.0]; SH3 domain [PF00018.30, score=39.0]; SH2 domain [PF00017.26, score=31.8]; Haspin like kinase domain [PF12330.10, score=26.4]; ABC1 atypical kinase-like domain [PF03109.18, score=23.5]; Variant SH3 domain [PF07653.19, score=18.9]} {Human: ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=352, Expect=5e-116]; ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=340, Expect=7e-111]; ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=340, Expect=3e-111]; ENSG00000176105, YES1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=338, Expect=6e-110]} {Mouse: ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=343, Expect=3e-112]; ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=340, Expect=6e-111]; ENSMUSG00000014932, Yes1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=340, Expect=6e-111]; ENSMUSG00000003283, Hck, hemopoietic cell kinase, [Score=335, Expect=2e-109]; ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [Score=334, Expect=4e-109]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=318, Expect=1e-102]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=337, Expect=8e-111]} {Smed: dd_Smed_v6_3147_0_1, dd_Smed_v6_3147_0_1, [Score=384, Expect=1e-128]} {RNA1509_12794} {RNA1310_15672, RNA1509_12794} {RNA1509_12794, RNA815_6298} |
5. | MligTC455_41576 | 62 | 1.29 | Mlig455_041268, Mlig455_056183 | Neo: - Age: Down-Up-Up |
CPA2 | 0.968 | - | - | 0.968 | - | - | - | Mlig455_041268 {REF} {Length: 3226} {Pfam: Zinc carboxypeptidase [PF00246.26, score=244.4]; Carboxypeptidase activation peptide [PF02244.18, score=24.8]} {Human: ENSG00000158516, CPA2, carboxypeptidase A2, [Score=182, Expect=9e-52]; ENSG00000165078, CPA6, carboxypeptidase A6, [Score=178, Expect=3e-50]; ENSG00000144410, CPO, carboxypeptidase O, [Score=177, Expect=2e-50]; ENSG00000128510, CPA4, carboxypeptidase A4, [Score=174, Expect=4e-49]} {Mouse: ENSMUSG00000071553, Cpa2, carboxypeptidase A2, pancreatic, [Score=187, Expect=4e-54]; ENSMUSG00000042501, Cpa6, carboxypeptidase A6, [Score=186, Expect=2e-53]; ENSMUSG00000054446, Cpa1, carboxypeptidase A1, pancreatic, [Score=179, Expect=7e-51]} {Dmel: FBgn0029804, CG3097, [RH, Score=215, Expect=3e-64]} {Celegans: WBGene00020281, T06A4.1, [RH, Score=225, Expect=1e-66]} {Smed: dd_Smed_v6_5999_0_1, dd_Smed_v6_5999_0_1, [RH, Score=247, Expect=3e-77]} {RNA1509_12605} {RNA1310_10687.1} {RNA815_3959.1} Mlig455_056183 {REF} {Length: 2098} {Pfam: Zinc carboxypeptidase [PF00246.26, score=244.5]; Carboxypeptidase activation peptide [PF02244.18, score=24.0]} {Human: ENSG00000158516, CPA2, carboxypeptidase A2, [Score=182, Expect=6e-52]; ENSG00000144410, CPO, carboxypeptidase O, [Score=179, Expect=3e-51]; ENSG00000165078, CPA6, carboxypeptidase A6, [Score=178, Expect=3e-50]; ENSG00000128510, CPA4, carboxypeptidase A4, [Score=175, Expect=4e-49]} {Mouse: ENSMUSG00000071553, Cpa2, carboxypeptidase A2, pancreatic, [Score=188, Expect=2e-54]; ENSMUSG00000042501, Cpa6, carboxypeptidase A6, [Score=187, Expect=1e-53]} {Dmel: FBgn0029804, CG3097, [RH, Score=216, Expect=1e-64]} {Celegans: WBGene00020281, T06A4.1, [RH, Score=222, Expect=6e-66]} {Smed: dd_Smed_v6_5999_0_1, dd_Smed_v6_5999_0_1, [RH, Score=248, Expect=3e-77]} {RNA1509_12605} {RNA1310_10687.1} {RNA815_3959.1} |
6. | MligTC455_32699 | 111 | 2.31 | Mlig455_038166 | Neo: Irradiation Age: - |
FGFR3 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_038166 {REF} {Length: 5381} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=237.1]; Protein kinase domain [PF00069.27, score=125.1]; Immunoglobulin domain [PF13927.8, score=37.2]; Immunoglobulin domain [PF00047.27, score=33.3]; Immunoglobulin domain [PF13895.8, score=29.5]; Immunoglobulin V-set domain [PF07686.19, score=25.2]; Fungal protein kinase [PF17667.3, score=18.8]} {Human: ENSG00000068078, FGFR3, fibroblast growth factor receptor 3, [Score=203, Expect=1e-54]; ENSG00000077782, FGFR1, fibroblast growth factor receptor 1, [Score=199, Expect=4e-53]; ENSG00000160867, FGFR4, fibroblast growth factor receptor 4, [Score=195, Expect=2e-51]} {Mouse: ENSMUSG00000031565, Fgfr1, fibroblast growth factor receptor 1, [Score=199, Expect=3e-53]; ENSMUSG00000054252, Fgfr3, fibroblast growth factor receptor 3, [Score=198, Expect=1e-52]; ENSMUSG00000005320, Fgfr4, fibroblast growth factor receptor 4, [Score=195, Expect=2e-51]; ENSMUSG00000030849, Fgfr2, fibroblast growth factor receptor 2, [Score=193, Expect=9e-51]} {Dmel: FBgn0285896, btl, breathless, [Score=208, Expect=2e-55]} {Celegans: WBGene00001184, egl-15, Myoblast growth factor receptor egl-15, [Score=206, Expect=9e-55]} {Smed: dd_Smed_v6_12998_0_3, dd_Smed_v6_12998_0_3, [Score=196, Expect=2e-52]} {RNA1509_25243} {RNA1310_14119} {RNA815_2456.1} |
7. | MligTC455_14235 | 21 | 0.43 | Mlig455_039827 | Neo: - Age: - |
0.963 | - | - | - | - | - | 0.963 | Mlig455_039827 {REF} {Length: 644} {Pfam: Phage integrase family [PF00589.24, score=24.3]} {RNA1310_41759} {RNA815_21962} | |
8. | MligTC455_04889 | 135 | 2.82 | Mlig455_015062, Mlig455_027143 | Neo: - Age: - |
ENPP2, ENPP6 | 0.959 | - | - | 0.959 | - | - | - | Mlig455_015062 {REF} {Length: 850} {TRANSSPLICED} {Pfam: Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=81.7]} {Human: ENSG00000136960, ENPP2, ectonucleotide pyrophosphatase/phosphodiesterase 2, [Score=77.0, Expect=5e-16]} {Mouse: ENSMUSG00000038173, Enpp6, ectonucleotide pyrophosphatase/phosphodiesterase 6, [Score=75.5, Expect=2e-16]; ENSMUSG00000022425, Enpp2, ectonucleotide pyrophosphatase/phosphodiesterase 2, [Score=75.1, Expect=1e-15]} {Celegans: WBGene00007753, C27A7.1, Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.1, [Score=65.9, Expect=1e-12]} {Smed: dd_Smed_v6_1269_0_1, dd_Smed_v6_1269_0_1, [Score=117, Expect=5e-31]} {RNA1509_26890} {RNA1310_15252} {RNA815_20232} Mlig455_027143 {REF} {Length: 4109} {TRANSSPLICED} {Pfam: Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=125.6]} {Human: ENSG00000164303, ENPP6, ectonucleotide pyrophosphatase/phosphodiesterase 6, [Score=167, Expect=1e-45]} {Mouse: ENSMUSG00000038173, Enpp6, ectonucleotide pyrophosphatase/phosphodiesterase 6, [Score=168, Expect=4e-46]} {Celegans: WBGene00007753, C27A7.1, Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.1, [Score=80.5, Expect=1e-15]} {Smed: dd_Smed_v6_1269_0_1, dd_Smed_v6_1269_0_1, [RH, Score=218, Expect=2e-65]} {RNA1509_44891, RNA1509_53042} {RNA1310_16164.1, RNA1509_44891} {RNA1509_44891, RNA815_10561} |
9. | Mlig999035.1 | 0.957 | - | - | 0.957 | - | - | - | ||||||
10. | MligTC455_51893 | 85 | 1.77 | Mlig455_038854 | Neo: - |
MUC6 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_038854 {REF} {Length: 14630} {Human: ENSG00000277518, MUC6, mucin 6, oligomeric mucus/gel-forming, [Score=60.1, Expect=4e-08]; ENSG00000185499, MUC1, mucin 1, cell surface associated, [Score=58.2, Expect=1e-07]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=68.6, Expect=8e-11]} {Dmel: FBgn0052656, Muc11A, Mucin 11A, [Score=115, Expect=3e-25]} {RNA1509_54095} {RNA1310_22635} {RNA815_18562} |
11. | MligTC455_29799 | 205 | 4.28 | Mlig455_032801 | Neo: - Age: - Region-enriched R4: 2.587/0.03746 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_032801 {REF} {Length: 3122} {Pfam: RING-type zinc-finger [PF13445.8, score=23.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=18.6]} {RNA1509_59687} {RNA1310_10919.2} {RNA815_5303.1} | |
12. | MligTC455_51716 | 160 | 3.34 | Mlig455_070217 | Neo: - Age: Up-Down-Down |
0.95 | - | - | 0.950 | - | - | - | Mlig455_070217 {REF} {Length: 2635} {RNA1509_54215} {RNA1310_88667, RNA1509_54215} {RNA1509_54215, RNA815_36352} |