TomoSeq data search

Data search

Results for MligTC455_35465

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_35465

191

3.97

Mlig455_031802

Neo: -

Age: -

IRX5

Mlig455_031802 {REF} {Length: 1577} {Pfam: Homeobox KN domain [PF05920.13, score=57.4]; Homeodomain [PF00046.31, score=33.1]} {Human: ENSG00000176842, IRX5, iroquois homeobox 5, [Score=77.4, Expect=2e-15]; ENSG00000170561, IRX2, iroquois homeobox 2, [Score=77.4, Expect=2e-15]; ENSG00000113430, IRX4, iroquois homeobox 4, [Score=77.0, Expect=2e-15]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=77.0, Expect=2e-15]; ENSG00000170549, IRX1, iroquois homeobox 1, [Score=73.9, Expect=2e-14]; ENSG00000177508, IRX3, iroquois homeobox 3, [Score=73.6, Expect=3e-14]} {Mouse: ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=77.8, Expect=8e-16]; ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=77.8, Expect=9e-16]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=77.4, Expect=9e-16]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=77.4, Expect=1e-15]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=74.3, Expect=4e-15]} {Dmel: FBgn0015919, caup, caupolican, [Score=80.1, Expect=1e-16]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=73.2, Expect=1e-14]} {Smed: dd_Smed_v6_14656_0_1, dd_Smed_v6_14656_0_1, [Score=84.3, Expect=4e-19]} {RNA1509_12832} {RNA1310_22657} {RNA815_13207}

Cumulative graph for MligTC455_35465

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.914	2.525	0.30869	0.95791
RegionR2	-0.246	2.525	0.92375	1.00000
RegionR3	1.027	2.525	0.31206	0.85124
RegionR4	0.945	2.525	0.40531	0.73236
RegionR5	0.288	2.525	0.74359	1.00000
RegionR6	0.812	2.525	0.44910	1.00000
RegionR7	1.102	2.525	0.34291	0.97997
RegionR8	0.985	2.525	0.57076	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.025	2.525	1.00000	1.00000
RegenerationR2	-2.657	2.525	0.00072	0.03818
RegenerationR3	-1.124	2.525	0.12285	0.54279
RegenerationR4	-0.987	2.525	0.21323	0.66032
RegenerationR5	-0.686	2.525	0.38229	0.78818
RegenerationR6	-1.594	2.525	0.03987	0.24979
RegenerationBL	-0.191	2.525	0.81693	1.00000
RegenerationTP	-0.93	2.525	0.44092	0.86054

Genes with expression patterns similar to MligTC455_35465

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35465	191	3.97	Mlig455_031802	Neo: - Age: -	IRX5	5	-	1.000	1.000	1.000	1.000	1.000	Mlig455_031802 {REF} {Length: 1577} {Pfam: Homeobox KN domain [PF05920.13, score=57.4]; Homeodomain [PF00046.31, score=33.1]} {Human: ENSG00000176842, IRX5, iroquois homeobox 5, [Score=77.4, Expect=2e-15]; ENSG00000170561, IRX2, iroquois homeobox 2, [Score=77.4, Expect=2e-15]; ENSG00000113430, IRX4, iroquois homeobox 4, [Score=77.0, Expect=2e-15]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=77.0, Expect=2e-15]; ENSG00000170549, IRX1, iroquois homeobox 1, [Score=73.9, Expect=2e-14]; ENSG00000177508, IRX3, iroquois homeobox 3, [Score=73.6, Expect=3e-14]} {Mouse: ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=77.8, Expect=8e-16]; ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=77.8, Expect=9e-16]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=77.4, Expect=9e-16]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=77.4, Expect=1e-15]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=74.3, Expect=4e-15]} {Dmel: FBgn0015919, caup, caupolican, [Score=80.1, Expect=1e-16]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=73.2, Expect=1e-14]} {Smed: dd_Smed_v6_14656_0_1, dd_Smed_v6_14656_0_1, [Score=84.3, Expect=4e-19]} {RNA1509_12832} {RNA1310_22657} {RNA815_13207}
2.	MligTC455_53510	405	8.43	Mlig455_039941	Neo: - Age: Up-Down-Down Region-enriched R8: 3.005/0.01946 Region-enriched R7: 2.875/0.00224	KREMEN1	1.681	-	-	-	0.731	0.950	-	Mlig455_039941 {REF} {Length: 4661} {Pfam: WSC domain [PF01822.21, score=619.2]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=66.6, Expect=2e-10]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=63.9, Expect=9e-10]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=71.2, Expect=6e-12]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=52.0, Expect=3e-06]} {RNA1509_15008} {RNA1310_5799, RNA1509_15008} {RNA1509_15008, RNA815_22574}
3.	MligTC455_40871	48	1	Mlig455_050411	Neo: - Age: -		0.984	-	-	-	-	0.984	-	Mlig455_050411 {REF} {Length: 2867} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=173.2]} {Smed: dd_Smed_v6_16274_0_1, dd_Smed_v6_16274_0_1, [Score=227, Expect=3e-66]} {RNA1310_46466} {RNA815_48916}
4.	MligTC455_37975	25	0.53	Mlig455_055324	Neo: - Age: -	ASAH1	0.972	-	-	-	-	0.972	-	Mlig455_055324 {REF} {Length: 1369} {TRANSSPLICED} {Pfam: Linear amide C-N hydrolases, choloylglycine hydrolase family [PF02275.20, score=84.4]} {Human: ENSG00000104763, ASAH1, N-acylsphingosine amidohydrolase 1, [Score=329, Expect=2e-111]} {Mouse: ENSMUSG00000031591, Asah1, N-acylsphingosine amidohydrolase 1, [Score=318, Expect=2e-106]} {Celegans: WBGene00010769, asah-1, Acid ceramidase, [Score=257, Expect=1e-82]} {RNA1509_25332} {RNA1310_24069.1} {RNA815_9637.1}
5.	MligTC455_19642	697	14.51	Mlig455_008581	Neo: - Age: -	CDKAL1	0.971	-	-	-	-	0.971	-	Mlig455_008581 {REF} {Length: 2592} {TRANSSPLICED} {Pfam: Uncharacterized protein family UPF0004 [PF00919.22, score=70.7]; Radical SAM superfamily [PF04055.23, score=52.5]; TRAM domain [PF01938.22, score=22.3]} {Human: ENSG00000145996, CDKAL1, CDK5 regulatory subunit associated protein 1 like 1, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000006191, Cdkal1, CDK5 regulatory subunit associated protein 1-like 1, [RH, Score=574, Expect=0.0]} {Dmel: FBgn0034214, CG6550, [RH, Score=594, Expect=0.0]} {Celegans: WBGene00022363, Y92H12BL.1, Threonylcarbamoyladenosine tRNA methylthiotransferase, [RH, Score=389, Expect=5e-131]} {Smed: dd_Smed_v6_2358_0_1, dd_Smed_v6_2358_0_1, [RH, Score=558, Expect=0.0]} {RNA1509_38379, RNA1509_55471, RNA1509_8176} {RNA1310_6972.2, RNA1509_38379, RNA1509_55471, RNA1509_8176} {RNA1509_38379, RNA1509_55471, RNA1509_8176, RNA815_7659}
6.	MligTC455_18960	60	1.24	Mlig455_054452	Neo: - Age: - Regeneration-enriched R6: 7.163 Regeneration-enriched BL: 5.429		0.968	-	-	-	-	0.968	-	Mlig455_054452 {REF} {Length: 3779} {Pfam: Galactose binding lectin domain [PF02140.20, score=26.2]} {RNA1509_49058} {RNA1310_33725} {RNA815_48317}
7.	MligTC455_24768	192	4.01	Mlig455_067990	Neo: - Age: -	ZNF521	0.963	-	-	-	-	0.963	-	Mlig455_067990 {REF} {Length: 3203} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=31.0]; Zinc finger, C2H2 type [PF00096.28, score=25.2]} {Human: ENSG00000198795, ZNF521, zinc finger protein 521, [Score=49.7, Expect=1e-05]; ENSG00000100105, PATZ1, POZ/BTB and AT hook containing zinc finger 1, [Score=49.7, Expect=1e-05]} {Mouse: ENSMUSG00000024420, Zfp521, zinc finger protein 521, [Score=49.3, Expect=1e-05]; ENSMUSG00000020453, Patz1, POZ (BTB) and AT hook containing zinc finger 1, [Score=49.3, Expect=8e-06]} {RNA1509_16225, RNA1509_55562} {RNA1310_1264.1, RNA1509_55562} {RNA1509_55562, RNA815_3978.1}
8.	MligTC455_22276	879	18.32	Mlig455_052291	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.546 Region-enriched R5: 1.399/0.04284	PKM	0.961	-	-	-	-	0.961	-	Mlig455_052291 {REF} {Length: 2742} {TRANSSPLICED} {Pfam: Pyruvate kinase, barrel domain [PF00224.23, score=533.1]; Pyruvate kinase, alpha/beta domain [PF02887.18, score=107.5]; HpcH/HpaI aldolase/citrate lyase family [PF03328.16, score=22.4]} {Human: ENSG00000067225, PKM, pyruvate kinase M1/2, [RH, Score=703, Expect=0.0]; ENSG00000262785, PKLR, pyruvate kinase L/R, [RH, Score=670, Expect=0.0]; ENSG00000143627, PKLR, pyruvate kinase L/R, [RH, Score=670, Expect=0.0]} {Mouse: ENSMUSG00000032294, Pkm, pyruvate kinase, muscle, [RH, Score=701, Expect=0.0]} {Dmel: FBgn0267385, PyK, Pyruvate kinase, [RH, Score=664, Expect=0.0]} {Celegans: WBGene00009126, pyk-1, Pyruvate kinase, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_605_0_1, dd_Smed_v6_605_0_1, [RH, Score=771, Expect=0.0]} {RNA1509_1681, RNA1509_47167} {RNA1310_7731.1, RNA1509_47167} {RNA1509_47167, RNA815_3516.1}
9.	MligTC455_41601	67	1.4	Mlig455_033111	Neo: - Age: logFC(26M/2M)=-0.357	ECE1	0.961	-	-	-	-	0.961	-	Mlig455_033111 {REF} {Length: 4407} {TRANSSPLICED} {Pfam: Peptidase family M13 [PF01431.23, score=220.8]; Peptidase family M13 [PF05649.15, score=194.1]} {Human: ENSG00000117298, ECE1, endothelin converting enzyme 1, [Score=400, Expect=3e-127]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=398, Expect=5e-125]; ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=398, Expect=7e-127]} {Mouse: ENSMUSG00000057530, Ece1, endothelin converting enzyme 1, [Score=396, Expect=5e-126]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=392, Expect=2e-124]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=392, Expect=1e-122]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=374, Expect=2e-117]} {Celegans: WBGene00017557, nep-11, Neprilysin-11, [Score=309, Expect=1e-92]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=328, Expect=4e-100]} {RNA1509_35151} {RNA1310_2116.1} {RNA815_5780}
10.	MligTC455_12265	24	0.5	Mlig455_032250	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_032250 {REF} {Length: 497} {NoTransDecoderORF} {RNA1310_12895} {RNA815_7040}
11.	MligTC455_32346	554	11.54	Mlig455_059091	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.354 Region-enriched R5: 1.264/0.01600	PLCXD3	0.958	-	-	-	-	0.958	-	Mlig455_059091 {REF} {Length: 2246} {TRANSSPLICED} {Pfam: Phosphatidylinositol-specific phospholipase C, X domain [PF00388.21, score=22.1]} {Human: ENSG00000182836, PLCXD3, phosphatidylinositol specific phospholipase C X domain containing 3, [RH, Score=179, Expect=4e-53]} {Mouse: ENSMUSG00000049148, Plcxd3, phosphatidylinositol-specific phospholipase C, X domain containing 3, [RH, Score=181, Expect=1e-53]} {Dmel: FBgn0032845, CG10747, [Score=114, Expect=1e-28]} {Celegans: WBGene00018184, F38E9.1, [Score=104, Expect=2e-24]} {Smed: dd_Smed_v6_7380_0_1, dd_Smed_v6_7380_0_1, [RH, Score=165, Expect=2e-48]} {RNA1509_14888, RNA1509_25027} {RNA1310_31838.1, RNA1509_25027} {RNA1509_25027, RNA815_7591.1}
12.	MligTC455_12217	33	0.68	Mlig455_068732	Neo: - Age: Down-Up-Up		0.957	-	-	-	-	0.957	-	Mlig455_068732 {REF} {Length: 3365} {Pfam: High molecular weight glutenin subunit [PF03157.15, score=22.1]} {RNA1310_29196.2} {RNA815_33399}
13.	MligTC455_05691	75	1.56	Mlig455_029638	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_029638 {REF} {Length: 772} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22348} {RNA1310_19581, RNA1509_22348} {RNA1509_22348, RNA815_8950}
14.	MligTC455_21789	52	1.07	Mlig455_032584	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_032584 {REF} {Length: 1578} {Pfam: Integrase zinc binding domain [PF17921.3, score=54.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=34.1]; Integrase core domain [PF00665.28, score=29.0]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=124, Expect=8e-31]} {RNA1509_29748} {RNA1310_1140.1} {RNA815_993.1}
15.	MligTC455_54102	228	4.75	Mlig455_012249, Mlig455_012262, Mlig455_052497	Neo: - Age: logFC(26M/2M)=0.459 Region-enriched R5: 3.431/0.00196		0.95	-	-	-	-	0.950	-	Mlig455_012249 {REF} {Length: 1454} {TRANSSPLICED} {RNA1310_29892} {RNA815_39834} Mlig455_012262 {REF} {Length: 1597} {TRANSSPLICED} {RNA1310_29892} {RNA815_39834} Mlig455_052497 {REF} {Length: 1723} {TRANSSPLICED} {RNA1310_29892} {RNA815_39834}

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