TomoSeq data search

Data search

Results for MligTC455_35467

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_35467	43	0.90	Mlig455_047588	Neo: - Age: -	IRX2	Mlig455_047588 {REF} {Length: 1304} {Pfam: Homeobox KN domain [PF05920.13, score=56.8]; Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=45.4]; Homeodomain [PF00046.31, score=32.4]} {Human: ENSG00000170561, IRX2, iroquois homeobox 2, [Score=77.0, Expect=8e-15]; ENSG00000176842, IRX5, iroquois homeobox 5, [Score=77.0, Expect=7e-15]; ENSG00000113430, IRX4, iroquois homeobox 4, [Score=76.6, Expect=1e-14]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=76.3, Expect=1e-14]; ENSG00000170549, IRX1, iroquois homeobox 1, [Score=73.9, Expect=7e-14]; ENSG00000177508, IRX3, iroquois homeobox 3, [Score=73.6, Expect=1e-13]} {Mouse: ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=77.8, Expect=3e-15]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=77.4, Expect=4e-15]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=77.0, Expect=4e-15]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=76.6, Expect=7e-15]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=74.3, Expect=4e-14]} {Dmel: FBgn0015919, caup, caupolican, [Score=80.1, Expect=5e-16]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=73.2, Expect=3e-14]} {Smed: dd_Smed_v6_14656_0_1, dd_Smed_v6_14656_0_1, [Score=82.4, Expect=6e-18]} {RNA1310_82642} {RNA815_17918.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_35467

0.90

Mlig455_047588

Neo: -

Age: -

IRX2

Mlig455_047588 {REF} {Length: 1304} {Pfam: Homeobox KN domain [PF05920.13, score=56.8]; Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=45.4]; Homeodomain [PF00046.31, score=32.4]} {Human: ENSG00000170561, IRX2, iroquois homeobox 2, [Score=77.0, Expect=8e-15]; ENSG00000176842, IRX5, iroquois homeobox 5, [Score=77.0, Expect=7e-15]; ENSG00000113430, IRX4, iroquois homeobox 4, [Score=76.6, Expect=1e-14]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=76.3, Expect=1e-14]; ENSG00000170549, IRX1, iroquois homeobox 1, [Score=73.9, Expect=7e-14]; ENSG00000177508, IRX3, iroquois homeobox 3, [Score=73.6, Expect=1e-13]} {Mouse: ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=77.8, Expect=3e-15]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=77.4, Expect=4e-15]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=77.0, Expect=4e-15]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=76.6, Expect=7e-15]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=74.3, Expect=4e-14]} {Dmel: FBgn0015919, caup, caupolican, [Score=80.1, Expect=5e-16]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=73.2, Expect=3e-14]} {Smed: dd_Smed_v6_14656_0_1, dd_Smed_v6_14656_0_1, [Score=82.4, Expect=6e-18]} {RNA1310_82642} {RNA815_17918.1}

Cumulative graph for MligTC455_35467

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	3.888	0.762	0.42458	1.00000
RegionR2	-2.096	0.762	0.99980	1.00000
RegionR3	-2.227	0.762	0.99982	1.00000
RegionR4	2.923	0.762	0.10085	0.30915
RegionR5	1.173	0.762	0.19700	0.48522
RegionR6	1.245	0.762	0.51478	1.00000
RegionR7	-2.543	0.762	0.99982	1.00000
RegionR8	-2.363	0.762	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.569	0.762	0.69395	1.00000
RegenerationR2	0.287	0.762	0.83200	0.99871
RegenerationR3	1.423	0.762	0.69721	0.94686
RegenerationR4	-0.145	0.762	0.50039	0.86975
RegenerationR5	-0.947	0.762	0.31648	0.74055
RegenerationR6	-4.233	0.762	0.04266	0.25772
RegenerationBL	-1.923	0.762	0.99980	1.00000
RegenerationTP	-1.43	0.762	0.99990	1.00000

Genes with expression patterns similar to MligTC455_35467

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35467	43	0.9	Mlig455_047588	Neo: - Age: -	IRX2	1	-	-	-	-	-	1.000	Mlig455_047588 {REF} {Length: 1304} {Pfam: Homeobox KN domain [PF05920.13, score=56.8]; Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=45.4]; Homeodomain [PF00046.31, score=32.4]} {Human: ENSG00000170561, IRX2, iroquois homeobox 2, [Score=77.0, Expect=8e-15]; ENSG00000176842, IRX5, iroquois homeobox 5, [Score=77.0, Expect=7e-15]; ENSG00000113430, IRX4, iroquois homeobox 4, [Score=76.6, Expect=1e-14]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=76.3, Expect=1e-14]; ENSG00000170549, IRX1, iroquois homeobox 1, [Score=73.9, Expect=7e-14]; ENSG00000177508, IRX3, iroquois homeobox 3, [Score=73.6, Expect=1e-13]} {Mouse: ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=77.8, Expect=3e-15]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=77.4, Expect=4e-15]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=77.0, Expect=4e-15]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=76.6, Expect=7e-15]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=74.3, Expect=4e-14]} {Dmel: FBgn0015919, caup, caupolican, [Score=80.1, Expect=5e-16]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=73.2, Expect=3e-14]} {Smed: dd_Smed_v6_14656_0_1, dd_Smed_v6_14656_0_1, [Score=82.4, Expect=6e-18]} {RNA1310_82642} {RNA815_17918.1}
2.	MligTC455_35468	44	0.92	Mlig455_047603	Neo: - Age: -	IRX2	1	-	-	-	-	-	1.000	Mlig455_047603 {REF} {Length: 1843} {Pfam: Homeobox KN domain [PF05920.13, score=56.8]; Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=45.4]; Homeodomain [PF00046.31, score=32.4]} {Human: ENSG00000170561, IRX2, iroquois homeobox 2, [Score=77.0, Expect=8e-15]; ENSG00000176842, IRX5, iroquois homeobox 5, [Score=77.0, Expect=7e-15]; ENSG00000113430, IRX4, iroquois homeobox 4, [Score=76.6, Expect=1e-14]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=76.3, Expect=1e-14]; ENSG00000170549, IRX1, iroquois homeobox 1, [Score=73.9, Expect=7e-14]; ENSG00000177508, IRX3, iroquois homeobox 3, [Score=73.6, Expect=1e-13]} {Mouse: ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=77.8, Expect=3e-15]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=77.4, Expect=4e-15]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=77.0, Expect=4e-15]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=76.6, Expect=7e-15]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=74.3, Expect=4e-14]} {Dmel: FBgn0015919, caup, caupolican, [Score=80.1, Expect=5e-16]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=73.2, Expect=3e-14]} {Smed: dd_Smed_v6_14656_0_1, dd_Smed_v6_14656_0_1, [Score=82.4, Expect=6e-18]} {RNA1509_12832} {RNA1310_22657} {RNA815_13207}
3.	MligTC455_18616	112	2.32	Mlig455_003658, Mlig455_003870	Neo: - Age: Up-Down-Down	TUT4	0.96	-	-	-	-	-	0.960	Mlig455_003658 {REF} {Length: 5734} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=173.1]; Cid1 family poly A polymerase [PF03828.21, score=66.6]; Zinc knuckle [PF00098.25, score=18.7]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [RH, Score=327, Expect=6e-91]} {Mouse: ENSMUSG00000034610, Tut4, terminal uridylyl transferase 4, [RH, Score=328, Expect=2e-91]} {Dmel: FBgn0260780, wisp, wispy, [Score=124, Expect=4e-28]} {Celegans: WBGene00019629, cid-1, Caffeine Induced Death (S. pombe Cid) homolog, [RH, Score=205, Expect=3e-53]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [RH, Score=259, Expect=5e-70]} {RNA1509_51224, RNA1509_53960, RNA1509_5815} {RNA1310_1393.1, RNA1509_51224, RNA1509_53960, RNA1509_5815} {RNA1509_51224, RNA1509_53960, RNA1509_5815, RNA815_619} Mlig455_003870 {REF} {Length: 5673} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=172.7]; Cid1 family poly A polymerase [PF03828.21, score=67.3]; Zinc knuckle [PF00098.25, score=19.0]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [RH, Score=327, Expect=6e-91]} {Mouse: ENSMUSG00000034610, Tut4, terminal uridylyl transferase 4, [RH, Score=328, Expect=2e-91]} {Dmel: FBgn0260780, wisp, wispy, [Score=123, Expect=7e-28]} {Celegans: WBGene00019629, cid-1, Caffeine Induced Death (S. pombe Cid) homolog, [RH, Score=204, Expect=9e-53]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [RH, Score=262, Expect=3e-71]} {RNA1509_5815} {RNA1310_1393.1} {RNA815_619}
4.	MligTC455_33555	19	0.4	Mlig455_005987	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_005987 {REF} {Length: 469} {TRANSSPLICED} {RNA1509_22341} {RNA1310_84021} {RNA815_43689}