TomoSeq data search

Data search

Results for MligTC455_35504

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_35504	41	0.84	Mlig455_049183	Neo: - Age: -		Mlig455_049183 {REF} {Length: 1391} {NoTransDecoderORF} {RNA1310_47762} {RNA815_47085}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_35504

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	5.288	0.903	0.99994	1.00000
RegionR2	-2.462	0.903	1.00000	1.00000
RegionR3	-1.689	0.903	1.00000	1.00000
RegionR4	3.629	0.903	1.00000	1.00000
RegionR5	-1.596	0.903	1.00000	1.00000
RegionR6	-3.054	0.903	1.00000	1.00000
RegionR7	-1.516	0.903	0.99985	1.00000
RegionR8	1.4	0.903	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.869	0.903	0.99996	1.00000
RegenerationR2	2.145	0.903	0.00308	0.08488
RegenerationR3	1.997	0.903	0.99978	1.00000
RegenerationR4	-0.479	0.903	1.00000	1.00000
RegenerationR5	2.219	0.903	0.99965	1.00000
RegenerationR6	1.667	0.903	0.99990	1.00000
RegenerationBL	2.221	0.903	1.00000	1.00000
RegenerationTP	-1.179	0.903	0.99984	1.00000

Genes with expression patterns similar to MligTC455_35504

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35504	41	0.84	Mlig455_049183	Neo: - Age: -		1	-	-	-	-	-	1.000	Mlig455_049183 {REF} {Length: 1391} {NoTransDecoderORF} {RNA1310_47762} {RNA815_47085}
2.	MligTC455_24586	20	0.41	Mlig455_051919, Mlig455_053126, Mlig455_064052	Neo: - Age: Up-Down-Down	ASPRV1, KCTD1	0.96	-	-	-	-	-	0.960	Mlig455_051919 {REF} {Length: 5292} {Pfam: Phage integrase family [PF00589.24, score=21.0]} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=60.8, Expect=3e-09]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=60.8, Expect=3e-09]} {RNA1509_37808} {RNA1310_227.1} {RNA815_2993.1} Mlig455_053126 {REF} {Length: 4200} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=34.1]; Aspartyl protease [PF13650.8, score=28.3]; Aspartyl protease [PF09668.12, score=26.1]; 'Cold-shock' DNA-binding domain [PF00313.24, score=23.0]; Zinc knuckle [PF00098.25, score=22.9]; Protein of unknown function (DUF1759) [PF03564.17, score=21.7]} {Human: ENSG00000244617, ASPRV1, aspartic peptidase retroviral like 1, [RH, Score=59.7, Expect=9e-09]} {Mouse: ENSMUSG00000033508, Asprv1, aspartic peptidase, retroviral-like 1, [Score=57.8, Expect=2e-08]} {RNA1509_37808, RNA1509_54359} {RNA1310_391, RNA1509_54359} {RNA1509_54359, RNA815_2993.1} Mlig455_064052 {REF} {Length: 667} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=29.7]; Aspartyl protease [PF13650.8, score=22.4]; Aspartyl protease [PF09668.12, score=20.4]} {Human: ENSG00000244617, ASPRV1, aspartic peptidase retroviral like 1, [Score=50.4, Expect=6e-07]} {Mouse: ENSMUSG00000033508, Asprv1, aspartic peptidase, retroviral-like 1, [Score=52.4, Expect=7e-08]} {RNA1509_30677} {RNA1310_391} {RNA815_131.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_35504

0.84

Mlig455_049183

Neo: -

Age: -

1.000

Mlig455_049183 {REF} {Length: 1391} {NoTransDecoderORF} {RNA1310_47762} {RNA815_47085}

MligTC455_24586

0.41

Mlig455_051919, Mlig455_053126, Mlig455_064052

Neo: -

Age: Up-Down-Down

ASPRV1, KCTD1

0.96

0.960

Mlig455_051919 {REF} {Length: 5292} {Pfam: Phage integrase family [PF00589.24, score=21.0]} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=60.8, Expect=3e-09]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=60.8, Expect=3e-09]} {RNA1509_37808} {RNA1310_227.1} {RNA815_2993.1}

Mlig455_053126 {REF} {Length: 4200} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=34.1]; Aspartyl protease [PF13650.8, score=28.3]; Aspartyl protease [PF09668.12, score=26.1]; 'Cold-shock' DNA-binding domain [PF00313.24, score=23.0]; Zinc knuckle [PF00098.25, score=22.9]; Protein of unknown function (DUF1759) [PF03564.17, score=21.7]} {Human: ENSG00000244617, ASPRV1, aspartic peptidase retroviral like 1, [RH, Score=59.7, Expect=9e-09]} {Mouse: ENSMUSG00000033508, Asprv1, aspartic peptidase, retroviral-like 1, [Score=57.8, Expect=2e-08]} {RNA1509_37808, RNA1509_54359} {RNA1310_391, RNA1509_54359} {RNA1509_54359, RNA815_2993.1}

Mlig455_064052 {REF} {Length: 667} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=29.7]; Aspartyl protease [PF13650.8, score=22.4]; Aspartyl protease [PF09668.12, score=20.4]} {Human: ENSG00000244617, ASPRV1, aspartic peptidase retroviral like 1, [Score=50.4, Expect=6e-07]} {Mouse: ENSMUSG00000033508, Asprv1, aspartic peptidase, retroviral-like 1, [Score=52.4, Expect=7e-08]} {RNA1509_30677} {RNA1310_391} {RNA815_131.1}