Data search
Results for MligTC455_35578
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35578 | 522 | 10.87 | Mlig455_018308 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.461 Regeneration-downregulated BL: -4.178 Regeneration-depleted BL: -4.178 |
Mlig455_018308 {REF} {Length: 2793} {RNA1509_45672, RNA1509_7995} {RNA1310_27285, RNA1509_7995} {RNA1509_7995, RNA815_11787.1} |
Cumulative graph for MligTC455_35578
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.013 | 3.537 | 0.16864 | 0.79362 | |
| RegionR2 | -0.996 | 3.537 | 0.19177 | 0.54778 | |
| RegionR3 | -0.002 | 3.537 | 0.99955 | 1.00000 | |
| RegionR4 | 0.512 | 3.537 | 0.45493 | 0.78352 | |
| RegionR5 | 0.495 | 3.537 | 0.38110 | 0.73539 | |
| RegionR6 | 0.49 | 3.537 | 0.41288 | 0.98134 | |
| RegionR7 | 0.627 | 3.537 | 0.33549 | 0.96986 | |
| RegionR8 | 0.887 | 3.537 | 0.20546 | 0.80617 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.018 | 3.537 | 0.99271 | 1.00000 | |
| RegenerationR2 | 0.586 | 3.537 | 0.42613 | 0.83201 | |
| RegenerationR3 | 0.64 | 3.537 | 0.38502 | 0.79301 | |
| RegenerationR4 | -0.197 | 3.537 | 0.79638 | 0.98515 | |
| RegenerationR5 | -0.164 | 3.537 | 0.81555 | 0.99304 | |
| RegenerationR6 | 0.406 | 3.537 | 0.58001 | 0.85775 | |
| RegenerationBL | -4.178 | 3.537 | 0.00020 | 0.00748 | Specific for BL: -4.178 |
| RegenerationTP | -0.783 | 3.537 | 0.29978 | 0.74518 |
Genes with expression patterns similar to MligTC455_35578
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35578 | 522 | 10.87 | Mlig455_018308 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.461 Regeneration-downregulated BL: -4.178 Regeneration-depleted BL: -4.178 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018308 {REF} {Length: 2793} {RNA1509_45672, RNA1509_7995} {RNA1310_27285, RNA1509_7995} {RNA1509_7995, RNA815_11787.1} | |
| 2. | MligTC455_28879 | 85 | 1.77 | Mlig455_006586 | Neo: - Age: - |
ARL16 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_006586 {REF} {Length: 1743} {Pfam: ADP-ribosylation factor family [PF00025.23, score=71.0]; G-protein alpha subunit [PF00503.22, score=33.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=31.6]; Signal recognition particle receptor beta subunit [PF09439.12, score=27.9]; Ras family [PF00071.24, score=27.1]; RsgA GTPase [PF03193.18, score=23.3]; 50S ribosome-binding GTPase [PF01926.25, score=22.9]; Gtr1/RagA G protein conserved region [PF04670.14, score=22.5]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=19.0]} {Human: ENSG00000214087, ARL16, ADP ribosylation factor like GTPase 16, [RH, Score=123, Expect=8e-36]} {Mouse: ENSMUSG00000057594, Arl16, ADP-ribosylation factor-like 16, [RH, Score=122, Expect=2e-35]} {Dmel: FBgn0031254, CG13692, [RH, Score=102, Expect=1e-27]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=65.1, Expect=1e-13]} {Smed: dd_Smed_v6_5801_0_1, dd_Smed_v6_5801_0_1, [RH, Score=122, Expect=1e-35]} {RNA1509_21320} {RNA1310_48678} {RNA815_20468} |
| 3. | MligTC455_44597 | 929 | 19.35 | Mlig455_024810 | Neo: - Age: - |
TSPAN9 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_024810 {REF} {Length: 2297} {Pfam: Tetraspanin family [PF00335.22, score=106.0]} {Human: ENSG00000011105, TSPAN9, tetraspanin 9, [Score=56.6, Expect=5e-09]} {Mouse: ENSMUSG00000067377, Tspan6, tetraspanin 6, [Score=54.3, Expect=3e-08]; ENSMUSG00000030352, Tspan9, tetraspanin 9, [Score=53.1, Expect=2e-08]; ENSMUSG00000040747, Cd53, CD53 antigen, [Score=51.6, Expect=2e-07]} {Dmel: FBgn0033629, Tsp47F, Tetraspanin 47F, [Score=48.9, Expect=9e-07]} {Celegans: WBGene00006632, tsp-6, Tetraspanin, [Score=47.8, Expect=2e-06]} {Smed: dd_Smed_v6_1719_0_1, dd_Smed_v6_1719_0_1, [Score=76.3, Expect=2e-16]} {RNA1509_25985, RNA1509_38725, RNA1509_45263} {RNA1310_17221.1, RNA1509_25985, RNA1509_38725} {RNA1509_25985, RNA1509_38725, RNA815_7179} |
| 4. | MligTC455_23847 | 133 | 2.78 | Mlig455_012637 | Neo: - Age: - |
ANKS1A | 0.964 | - | - | 0.964 | - | - | - | Mlig455_012637 {REF} {Length: 1962} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=51.9]; SAM domain (Sterile alpha motif) [PF07647.19, score=33.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=31.3]} {Human: ENSG00000064999, ANKS1A, ankyrin repeat and sterile alpha motif domain containing 1A, [Score=120, Expect=2e-28]} {Mouse: ENSMUSG00000024219, Anks1, ankyrin repeat and SAM domain containing 1, [RH, Score=130, Expect=3e-32]} {Dmel: FBgn0039075, CG4393, [Score=84.3, Expect=8e-17]} {RNA1310_16792} {RNA815_16594} |
| 5. | MligTC455_54175 | 1327 | 27.64 | Mlig455_059834 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 3.028 Region-enriched R4: 2.007/0.00106 |
0.963 | - | - | - | 0.963 | - | - | Mlig455_059834 {REF} {Length: 3215} {Pfam: Universal stress protein family [PF00582.28, score=83.8]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=131, Expect=3e-39]} {RNA1509_12684, RNA1509_41734} {RNA1310_5062.1, RNA1509_12684, RNA1509_41734} {RNA1509_12684, RNA1509_41734, RNA815_2234.1} | |
| 6. | MligTC455_38046 | 448 | 9.33 | Mlig455_032350, Mlig455_032409 | Neo: - Age: - |
0.962 | - | - | - | - | - | 0.962 | Mlig455_032350 {REF} {Length: 2247} {Pfam: Hyaluronan mediated motility receptor N-terminal [PF15905.7, score=18.5]} {RNA1509_29743} {RNA1310_11310.1, RNA1509_29743} {RNA1509_29743, RNA815_3940} Mlig455_032409 {REF} {Length: 1688} {RNA1509_29743} {RNA1310_11310.1} {RNA815_3940} |
|
| 7. | MligTC455_44359 | 64 | 1.34 | Mlig455_013001, Mlig455_013034 | Neo: Int S/G2/M Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_013001 {REF} {Length: 1483} {TRANSSPLICED} {RNA1509_45988} {RNA1310_62874} {RNA815_50321} Mlig455_013034 {REF} {Length: 360} {NoTransDecoderORF} {RNA1310_62874} |
|
| 8. | MligTC455_51187 | 424 | 8.84 | Mlig455_031079 | Neo: - Age: logFC(26M/2M)=-0.605 |
UBXN7 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_031079 {REF} {Length: 2246} {TRANSSPLICED} {Pfam: Thioredoxin-like [PF13899.8, score=52.8]; UBA-like domain [PF14555.8, score=47.5]; UBX domain [PF00789.22, score=44.7]} {Human: ENSG00000163960, UBXN7, UBX domain protein 7, [RH, Score=141, Expect=1e-36]} {Mouse: ENSMUSG00000053774, Ubxn7, UBX domain protein 7, [RH, Score=143, Expect=3e-37]} {Dmel: FBgn0031664, CG8892, [RH, Score=119, Expect=5e-29]} {Smed: dd_Smed_v6_10882_0_1, dd_Smed_v6_10882_0_1, [RH, Score=140, Expect=5e-37]} {RNA1509_22857} {RNA1310_21298} {RNA815_30672} |
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