Data search
Results for MligTC455_44597
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44597 | 929 | 19.35 | Mlig455_024810 | Neo: - Age: - |
TSPAN9 | Mlig455_024810 {REF} {Length: 2297} {Pfam: Tetraspanin family [PF00335.22, score=106.0]} {Human: ENSG00000011105, TSPAN9, tetraspanin 9, [Score=56.6, Expect=5e-09]} {Mouse: ENSMUSG00000067377, Tspan6, tetraspanin 6, [Score=54.3, Expect=3e-08]; ENSMUSG00000030352, Tspan9, tetraspanin 9, [Score=53.1, Expect=2e-08]; ENSMUSG00000040747, Cd53, CD53 antigen, [Score=51.6, Expect=2e-07]} {Dmel: FBgn0033629, Tsp47F, Tetraspanin 47F, [Score=48.9, Expect=9e-07]} {Celegans: WBGene00006632, tsp-6, Tetraspanin, [Score=47.8, Expect=2e-06]} {Smed: dd_Smed_v6_1719_0_1, dd_Smed_v6_1719_0_1, [Score=76.3, Expect=2e-16]} {RNA1509_25985, RNA1509_38725, RNA1509_45263} {RNA1310_17221.1, RNA1509_25985, RNA1509_38725} {RNA1509_25985, RNA1509_38725, RNA815_7179} |
Cumulative graph for MligTC455_44597
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.024 | 4.443 | 0.98127 | 1.00000 | |
| RegionR2 | 0.221 | 4.443 | 0.59067 | 0.94401 | |
| RegionR3 | 0.525 | 4.443 | 0.11866 | 0.59651 | |
| RegionR4 | 0.544 | 4.443 | 0.14537 | 0.39175 | |
| RegionR5 | -0.316 | 4.443 | 0.36415 | 0.71668 | |
| RegionR6 | 0.389 | 4.443 | 0.26704 | 0.85530 | |
| RegionR7 | 0.575 | 4.443 | 0.19624 | 0.80274 | |
| RegionR8 | -1.913 | 4.443 | 0.02452 | 0.30476 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.14 | 4.443 | 0.90413 | 1.00000 | |
| RegenerationR2 | -0.406 | 4.443 | 0.24033 | 0.68807 | |
| RegenerationR3 | -0.359 | 4.443 | 0.31198 | 0.74233 | |
| RegenerationR4 | -0.355 | 4.443 | 0.31673 | 0.75615 | |
| RegenerationR5 | 0.188 | 4.443 | 0.59346 | 0.90703 | |
| RegenerationR6 | 0.563 | 4.443 | 0.11482 | 0.41732 | |
| RegenerationBL | -0.445 | 4.443 | 0.45204 | 0.81897 | |
| RegenerationTP | 1.456 | 4.443 | 0.00926 | 0.16230 |
Genes with expression patterns similar to MligTC455_44597
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44597 | 929 | 19.35 | Mlig455_024810 | Neo: - Age: - |
TSPAN9 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024810 {REF} {Length: 2297} {Pfam: Tetraspanin family [PF00335.22, score=106.0]} {Human: ENSG00000011105, TSPAN9, tetraspanin 9, [Score=56.6, Expect=5e-09]} {Mouse: ENSMUSG00000067377, Tspan6, tetraspanin 6, [Score=54.3, Expect=3e-08]; ENSMUSG00000030352, Tspan9, tetraspanin 9, [Score=53.1, Expect=2e-08]; ENSMUSG00000040747, Cd53, CD53 antigen, [Score=51.6, Expect=2e-07]} {Dmel: FBgn0033629, Tsp47F, Tetraspanin 47F, [Score=48.9, Expect=9e-07]} {Celegans: WBGene00006632, tsp-6, Tetraspanin, [Score=47.8, Expect=2e-06]} {Smed: dd_Smed_v6_1719_0_1, dd_Smed_v6_1719_0_1, [Score=76.3, Expect=2e-16]} {RNA1509_25985, RNA1509_38725, RNA1509_45263} {RNA1310_17221.1, RNA1509_25985, RNA1509_38725} {RNA1509_25985, RNA1509_38725, RNA815_7179} |
| 2. | MligTC455_22308 | 1182 | 24.63 | Mlig455_009243 | Neo: - |
0.982 | - | - | - | 0.982 | - | - | Mlig455_009243 {REF} {Length: 2029} {RNA1509_466} {RNA1310_10184.1} {RNA815_3434} | |
| 3. | MligTC455_26448 | 1661 | 34.6 | Mlig455_039764 | Neo: - Age: Up-Down-Up |
UBE2D1 | 0.972 | - | - | - | - | - | 0.972 | Mlig455_039764 {REF} {Length: 850} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=176.4]} {Human: ENSG00000072401, UBE2D1, ubiquitin conjugating enzyme E2 D1, [Score=218, Expect=8e-74]; ENSG00000131508, UBE2D2, ubiquitin conjugating enzyme E2 D2, [Score=214, Expect=4e-72]; ENSG00000109332, UBE2D3, ubiquitin conjugating enzyme E2 D3, [Score=213, Expect=6e-72]; ENSG00000078967, UBE2D4, ubiquitin conjugating enzyme E2 D4 (putative), [Score=211, Expect=4e-71]} {Mouse: ENSMUSG00000019927, Ube2d1, ubiquitin-conjugating enzyme E2D 1, [Score=218, Expect=5e-74]; ENSMUSG00000091896, Ube2d2a, ubiquitin-conjugating enzyme E2D 2A, [Score=214, Expect=3e-72]; ENSMUSG00000078578, Ube2d3, ubiquitin-conjugating enzyme E2D 3, [Score=213, Expect=4e-72]; ENSMUSG00000063447, Ube2d2b, ubiquitin-conjugating enzyme E2D 2B, [Score=208, Expect=4e-70]} {Dmel: FBgn0011217, eff, effete, [Score=218, Expect=3e-74]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=215, Expect=6e-73]} {Smed: dd_Smed_v6_153_0_1, dd_Smed_v6_153_0_1, [Score=210, Expect=4e-71]} {RNA1509_25539, RNA1509_30467} {RNA1310_37179, RNA1509_25539, RNA1509_30467} {RNA1509_25539, RNA1509_30467, RNA815_19556.2} |
| 4. | MligTC455_35578 | 522 | 10.87 | Mlig455_018308 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.461 Regeneration-downregulated BL: -4.178 Regeneration-depleted BL: -4.178 |
0.965 | - | - | - | 0.965 | - | - | Mlig455_018308 {REF} {Length: 2793} {RNA1509_45672, RNA1509_7995} {RNA1310_27285, RNA1509_7995} {RNA1509_7995, RNA815_11787.1} | |
| 5. | MligTC455_38123 | 2050 | 42.71 | Mlig455_057082 | Neo: - Age: logFC(26M/2M)=0.478 Regeneration-downregulated BL: -2.362 Regeneration-depleted BL: -2.362 |
0.964 | - | - | - | - | - | 0.964 | Mlig455_057082 {REF} {Length: 3011} {RNA1509_38657, RNA1509_44276} {RNA1310_24496, RNA1509_38657, RNA1509_44276} {RNA1509_38657, RNA1509_44276, RNA815_15233} | |
| 6. | MligTC455_54175 | 1327 | 27.64 | Mlig455_059834 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 3.028 Region-enriched R4: 2.007/0.00106 |
0.958 | - | - | - | 0.958 | - | - | Mlig455_059834 {REF} {Length: 3215} {Pfam: Universal stress protein family [PF00582.28, score=83.8]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=131, Expect=3e-39]} {RNA1509_12684, RNA1509_41734} {RNA1310_5062.1, RNA1509_12684, RNA1509_41734} {RNA1509_12684, RNA1509_41734, RNA815_2234.1} |
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