TomoSeq data search

Data search

Results for MligTC455_35727

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_35727

864

18.00

Mlig455_067627

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.342

FRMD5

Mlig455_067627 {REF} {Length: 4848} {TRANSSPLICED} {Pfam: FERM central domain [PF00373.20, score=53.4]; FERM C-terminal PH-like domain [PF09380.12, score=47.2]; FERM N-terminal domain [PF09379.12, score=40.2]} {Human: ENSG00000171877, FRMD5, FERM domain containing 5, [Score=208, Expect=2e-59]; ENSG00000172159, FRMD3, FERM domain containing 3, [Score=207, Expect=8e-59]} {Mouse: ENSMUSG00000049122, Frmd3, FERM domain containing 3, [Score=213, Expect=3e-61]; ENSMUSG00000027238, Frmd5, FERM domain containing 5, [Score=207, Expect=2e-59]} {Dmel: FBgn0032225, CG5022, [RH, Score=208, Expect=3e-59]} {Celegans: WBGene00001491, frm-4, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=155, Expect=3e-40]} {Smed: dd_Smed_v6_6227_0_1, dd_Smed_v6_6227_0_1, [RH, Score=297, Expect=2e-92]} {RNA1509_19270, RNA1509_8473} {RNA1310_22678, RNA1509_19270} {RNA1509_19270, RNA815_15509.1}

Cumulative graph for MligTC455_35727

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.333	4.38	0.72761	1.00000
RegionR2	0.2	4.38	0.57095	0.93083
RegionR3	-0.472	4.38	0.13812	0.63509
RegionR4	0.723	4.38	0.04376	0.17628
RegionR5	-0.07	4.38	0.81154	1.00000
RegionR6	-0.545	4.38	0.10879	0.60223
RegionR7	0.173	4.38	0.66749	1.00000
RegionR8	0.324	4.38	0.50451	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.308	4.38	0.06298	0.73800
RegenerationR2	-0.042	4.38	0.87977	1.00000
RegenerationR3	0.626	4.38	0.06141	0.42014
RegenerationR4	-0.245	4.38	0.46517	0.85024
RegenerationR5	0.103	4.38	0.74240	0.96965
RegenerationR6	0.33	4.38	0.37192	0.71487
RegenerationBL	-0.336	4.38	0.43713	0.80498
RegenerationTP	-0.044	4.38	0.91723	1.00000

Genes with expression patterns similar to MligTC455_35727

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35727	864	18	Mlig455_067627	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.342	FRMD5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_067627 {REF} {Length: 4848} {TRANSSPLICED} {Pfam: FERM central domain [PF00373.20, score=53.4]; FERM C-terminal PH-like domain [PF09380.12, score=47.2]; FERM N-terminal domain [PF09379.12, score=40.2]} {Human: ENSG00000171877, FRMD5, FERM domain containing 5, [Score=208, Expect=2e-59]; ENSG00000172159, FRMD3, FERM domain containing 3, [Score=207, Expect=8e-59]} {Mouse: ENSMUSG00000049122, Frmd3, FERM domain containing 3, [Score=213, Expect=3e-61]; ENSMUSG00000027238, Frmd5, FERM domain containing 5, [Score=207, Expect=2e-59]} {Dmel: FBgn0032225, CG5022, [RH, Score=208, Expect=3e-59]} {Celegans: WBGene00001491, frm-4, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=155, Expect=3e-40]} {Smed: dd_Smed_v6_6227_0_1, dd_Smed_v6_6227_0_1, [RH, Score=297, Expect=2e-92]} {RNA1509_19270, RNA1509_8473} {RNA1310_22678, RNA1509_19270} {RNA1509_19270, RNA815_15509.1}
2.	MligTC455_54188	1224	25.51	Mlig455_011257, Mlig455_011337, Mlig455_011343	Neo: - Age: logFC(26M/2M)=-0.405 Region-enriched R2: 1.704/0.00045	TRPM3	2.539	-	-	-	0.831	0.952	0.756	Mlig455_011257 {REF} {Length: 4016} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=57.4]; Ankyrin repeats (many copies) [PF13637.8, score=35.7]; Ankyrin repeat [PF13606.8, score=29.0]; Ankyrin repeats (many copies) [PF13857.8, score=19.6]} {RNA1509_6328} {RNA1310_1706} {RNA815_498} Mlig455_011337 {REF} {Length: 4535} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=67.0]; Ankyrin repeats (many copies) [PF13637.8, score=42.0]; Ankyrin repeats (many copies) [PF13857.8, score=34.0]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=85.5, Expect=5e-16]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=83.6, Expect=2e-15]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=83.6, Expect=2e-15]; ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=81.3, Expect=1e-14]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=87.0, Expect=1e-16]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=86.3, Expect=2e-16]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=77.0, Expect=1e-13]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=68.9, Expect=2e-11]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=102, Expect=6e-22]} {RNA1509_6328} {RNA1310_1706, RNA1509_6328} {RNA1509_6328, RNA815_498} Mlig455_011343 {REF} {Length: 5711} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=61.4]; Ankyrin repeats (many copies) [PF13637.8, score=46.8]; Ankyrin repeat [PF00023.32, score=23.9]; Ankyrin repeat [PF13606.8, score=20.5]; Ankyrin repeats (many copies) [PF13857.8, score=20.1]} {RNA1509_6328} {RNA1310_1706} {RNA815_498}
3.	MligTC455_39607	305	6.35	Mlig455_049946	Neo: - Age: -	COL4A3BP	2.45	-	-	-	0.961	0.739	0.750	Mlig455_049946 {REF} {Length: 3668} {TRANSSPLICED} {Pfam: START domain [PF01852.21, score=65.9]; PH domain [PF00169.31, score=38.7]; Pleckstrin homology domain [PF15409.8, score=32.5]; Pleckstrin homology domain [PF15413.8, score=22.4]} {Human: ENSG00000113163, COL4A3BP, collagen type IV alpha 3 binding protein, [RH, Score=273, Expect=4e-84]} {Mouse: ENSMUSG00000021669, Col4a3bp, collagen, type IV, alpha 3 (Goodpasture antigen) binding protein, [Score=283, Expect=1e-85]} {Dmel: FBgn0027569, cert, ceramide transfer protein, [Score=261, Expect=2e-77]} {Celegans: WBGene00015646, mlt-10, [RH, Score=174, Expect=1e-45]} {Smed: dd_Smed_v6_5076_0_1, dd_Smed_v6_5076_0_1, [Score=174, Expect=2e-45]} {RNA1509_43762} {RNA1310_10709} {RNA815_11268}
4.	MligTC455_24593	493	10.28	Mlig455_046156, Mlig455_046158	Neo: - Age: Up-Up-Down		1.841	-	-	-	0.956	0.885	-	Mlig455_046156 {REF} {Length: 2010} {TRANSSPLICED} {RNA1509_23873, RNA1509_50107} {RNA1310_22168, RNA1509_50107} {RNA1509_50107, RNA815_131.1} Mlig455_046158 {REF} {Length: 2204} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58655} {RNA1310_32322} {RNA815_15011}
5.	MligTC455_34875	1475	30.73	Mlig455_065248	Neo: - Age: -	ZC2HC1A	1.781	-	-	-	0.968	0.813	-	Mlig455_065248 {REF} {Length: 3738} {TRANSSPLICED} {Pfam: zinc-finger of a C2HC-type [PF13913.8, score=49.0]; Double zinc ribbon [PF12773.9, score=21.6]} {Human: ENSG00000104427, ZC2HC1A, zinc finger C2HC-type containing 1A, [RH, Score=154, Expect=3e-43]} {Mouse: ENSMUSG00000043542, Zc2hc1a, zinc finger, C2HC-type containing 1A, [RH, Score=164, Expect=3e-47]} {Dmel: FBgn0261561, CG42675, [RH, Score=101, Expect=3e-25]} {Celegans: WBGene00020196, T03G11.3, Zinc finger C2HC domain-containing protein T03G11.3, [RH, Score=119, Expect=1e-30]} {Smed: dd_Smed_v6_2762_0_1, dd_Smed_v6_2762_0_1, [RH, Score=160, Expect=4e-46]} {RNA1509_10284, RNA1509_15621, RNA1509_26280, RNA1509_38311, RNA1509_49183} {RNA1310_22779, RNA1509_10284, RNA1509_15621, RNA1509_26280, RNA1509_38311, RNA1509_49183} {RNA1509_10284, RNA1509_15621, RNA1509_26280, RNA1509_38311, RNA1509_49183, RNA815_10636}
6.	MligTC455_45562	1241	25.84	Mlig455_039359	Neo: - Age: -		1.761	-	-	-	0.803	-	0.958	Mlig455_039359 {REF} {Length: 2118} {TRANSSPLICED} {RNA1509_2216, RNA1509_25536, RNA1509_33145, RNA1509_43493, RNA1509_60042, RNA1509_8588} {RNA1310_11895, RNA1509_25536, RNA1509_33145, RNA1509_43493, RNA1509_60042, RNA1509_8588} {RNA1509_25536, RNA1509_33145, RNA1509_43493, RNA1509_60042, RNA1509_8588, RNA815_4289.1}
7.	MligTC455_52764	458	9.53	Mlig455_007605	Neo: - Age: logFC(26M/2M)=-0.490		1.73	-	-	-	0.777	0.953	-	Mlig455_007605 {REF} {Length: 1786} {Pfam: Zinc finger, ZZ type [PF00569.19, score=42.1]; PB1 domain [PF00564.26, score=29.5]} {RNA1509_14616} {RNA1310_27419.1, RNA1509_14616} {RNA1509_14616, RNA815_11811}
8.	MligTC455_18507	1488	30.99	Mlig455_034016	Neo: - Age: logFC(26M/2M)=-0.250	AK8	1.72	-	-	-	0.752	0.968	-	Mlig455_034016 {REF} {Length: 1723} {Pfam: Adenylate kinase [PF00406.24, score=158.5]; AAA domain [PF13207.8, score=82.9]; AAA domain [PF13238.8, score=31.9]; Hydin Adenylate kinase-like domain [PF17213.5, score=30.1]; AAA domain [PF13671.8, score=26.8]; Regulatory subunit of type II PKA R-subunit [PF02197.19, score=23.1]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=18.7]} {Human: ENSG00000165695, AK8, adenylate kinase 8, [RH, Score=422, Expect=2e-143]} {Mouse: ENSMUSG00000026807, Ak8, adenylate kinase 8, [RH, Score=413, Expect=3e-140]} {Dmel: FBgn0283494, Adk2, Adenylate kinase 2, [Score=106, Expect=7e-26]} {Celegans: WBGene00002879, let-754, Adenylate kinase, [Score=100, Expect=6e-24]} {Smed: dd_Smed_v6_7317_0_1, dd_Smed_v6_7317_0_1, [RH, Score=431, Expect=1e-147]} {RNA1509_18238} {RNA1310_18637.1, RNA1509_18238} {RNA1509_18238, RNA815_7186}
9.	MligTC455_41701	1374	28.63	Mlig455_055263	Neo: - Age: -	CYP2C8	1.674	-	-	-	0.716	0.958	-	Mlig455_055263 {REF} {Length: 2238} {Pfam: Cytochrome P450 [PF00067.24, score=239.3]} {Human: ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=217, Expect=3e-64]} {Mouse: ENSMUSG00000030483, Cyp2b10, cytochrome P450, family 2, subfamily b, polypeptide 10, [Score=210, Expect=5e-62]; ENSMUSG00000040660, Cyp2b9, cytochrome P450, family 2, subfamily b, polypeptide 9, [Score=205, Expect=6e-60]; ENSMUSG00000060407, Cyp2a12, cytochrome P450, family 2, subfamily a, polypeptide 12, [Score=201, Expect=1e-58]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=150, Expect=2e-39]} {Celegans: WBGene00018261, cyp-33C5, CYtochrome P450 family, [Score=177, Expect=9e-50]} {Smed: dd_Smed_v6_2351_0_2, dd_Smed_v6_2351_0_2, [Score=244, Expect=7e-75]} {RNA1509_15694} {RNA1310_11391} {RNA815_585.2}
10.	MligTC455_38373	320	6.66	Mlig455_042133, Mlig455_042976	Neo: - Age: logFC(26M/2M)=-0.351	NELL2	0.971	-	-	-	-	-	0.971	Mlig455_042133 {REF} {Length: 5474} {Pfam: Calcium-binding EGF domain [PF07645.17, score=80.2]; EGF domain [PF12947.9, score=68.8]; von Willebrand factor type C domain [PF00093.20, score=66.5]; Complement Clr-like EGF-like [PF12662.9, score=41.2]; Human growth factor-like EGF [PF12661.9, score=30.9]; EGF-like domain [PF00008.29, score=27.8]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=25.7]; Laminin G domain [PF02210.26, score=21.5]; MSP1 EGF domain 1 [PF12946.9, score=21.5]} {Human: ENSG00000184613, NELL2, neural EGFL like 2, [RH, Score=464, Expect=7e-149]; ENSG00000165973, NELL1, neural EGFL like 1, [RH, Score=461, Expect=5e-148]} {Mouse: ENSMUSG00000022454, Nell2, NEL-like 2, [RH, Score=461, Expect=4e-148]; ENSMUSG00000055409, Nell1, NEL-like 1, [RH, Score=458, Expect=3e-147]} {Dmel: FBgn0053196, dpy, dumpy, [Score=117, Expect=3e-26]} {Celegans: WBGene00022816, fbn-1, FBN-1A.1; FiBrilliN homolog, [Score=107, Expect=2e-23]} {Smed: dd_Smed_v6_11653_0_1, dd_Smed_v6_11653_0_1, [RH, Score=271, Expect=1e-77]} {RNA1509_8941} {RNA1310_3623.1, RNA1509_8941} {RNA1509_8941, RNA815_1148} Mlig455_042976 {REF} {Length: 293} {NoTransDecoderORF} {RNA1310_124059}
11.	MligTC455_40385	107	2.22	Mlig455_000019, Mlig455_016555, Mlig455_032870, Mlig455_045206	Neo: - Age: Down-Up-Up		0.964	-	-	-	0.964	-	-	Mlig455_000019 {REF} {Length: 671} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_9759} {RNA815_3094.1} Mlig455_016555 {REF} {Length: 692} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_9759} {RNA815_3094.1} Mlig455_032870 {REF} {Length: 762} {RNA1509_23515} {RNA1310_9759} {RNA815_3094.1} Mlig455_045206 {REF} {Length: 643} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_9759} {RNA815_3094.1}
12.	MligTC455_37189	502	10.46	Mlig455_000597	Neo: - Age: logFC(26M/2M)=-0.210	SLC6A5	0.954	-	-	0.954	-	-	-	Mlig455_000597 {REF} {Length: 3309} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=618.6]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=534, Expect=1e-178]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=536, Expect=8e-180]} {Dmel: FBgn0034911, CG5549, [RH, Score=535, Expect=1e-174]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=420, Expect=2e-137]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [RH, Score=717, Expect=0.0]} {RNA1509_9225} {RNA1310_7320} {RNA815_2265}
13.	MligTC455_46959	842	17.54	Mlig455_003589	Neo: - Age: - Region-enriched R3: 1.028/0.03879	WBP2NL	0.954	-	-	-	-	-	0.954	Mlig455_003589 {REF} {Length: 2059} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [Score=55.1, Expect=1e-08]} {Mouse: ENSMUSG00000022455, Wbp2nl, WBP2 N-terminal like, [Score=53.5, Expect=5e-08]} {Dmel: FBgn0038642, Muc91C, Mucin 91C, [Score=56.6, Expect=4e-09]} {RNA1509_43757} {RNA1310_14041, RNA1509_43757} {RNA1509_43757, RNA815_5513.1}

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