Data search
Results for MligTC455_35790
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35790 | 822 | 17.12 | Mlig455_018903 | Neo: - Age: logFC(26M/2M)=-0.352 |
CCM2 | Mlig455_018903 {REF} {Length: 794} {TRANSSPLICED} {Pfam: Cerebral cavernous malformation protein, harmonin-homology [PF16545.7, score=30.7]} {Human: ENSG00000136280, CCM2, CCM2 scaffold protein, [Score=42.7, Expect=1e-05]} {RNA1509_35075} {RNA1310_39188, RNA1509_35075} {RNA1509_35075, RNA815_35459} |
Cumulative graph for MligTC455_35790
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.725 | 4.371 | 0.10144 | 0.67128 | |
| RegionR2 | 0.453 | 4.371 | 0.36463 | 0.75903 | |
| RegionR3 | -0.17 | 4.371 | 0.69727 | 1.00000 | |
| RegionR4 | 0.253 | 4.371 | 0.60087 | 0.91390 | |
| RegionR5 | 0.528 | 4.371 | 0.17379 | 0.44546 | |
| RegionR6 | 0.255 | 4.371 | 0.54041 | 1.00000 | |
| RegionR7 | 0.18 | 4.371 | 0.70308 | 1.00000 | |
| RegionR8 | 0.227 | 4.371 | 0.66904 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.721 | 4.371 | 0.68418 | 1.00000 | |
| RegenerationR2 | -0.547 | 4.371 | 0.24239 | 0.69021 | |
| RegenerationR3 | -0.245 | 4.371 | 0.63402 | 0.92204 | |
| RegenerationR4 | -0.603 | 4.371 | 0.24922 | 0.69755 | |
| RegenerationR5 | -0.679 | 4.371 | 0.15693 | 0.57825 | |
| RegenerationR6 | -0.894 | 4.371 | 0.09000 | 0.37362 | |
| RegenerationBL | -1.529 | 4.371 | 0.00965 | 0.09865 | |
| RegenerationTP | -0.069 | 4.371 | 0.89691 | 1.00000 |
Genes with expression patterns similar to MligTC455_35790
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35790 | 822 | 17.12 | Mlig455_018903 | Neo: - Age: logFC(26M/2M)=-0.352 |
CCM2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018903 {REF} {Length: 794} {TRANSSPLICED} {Pfam: Cerebral cavernous malformation protein, harmonin-homology [PF16545.7, score=30.7]} {Human: ENSG00000136280, CCM2, CCM2 scaffold protein, [Score=42.7, Expect=1e-05]} {RNA1509_35075} {RNA1310_39188, RNA1509_35075} {RNA1509_35075, RNA815_35459} |
| 2. | MligTC455_19486 | 1510 | 31.45 | Mlig455_046176 | Neo: - Age: - |
1.763 | - | - | 0.810 | 0.953 | - | - | Mlig455_046176 {REF} {Length: 3598} {TRANSSPLICED} {RNA1509_20225, RNA1509_28786, RNA1509_44147, RNA1509_45512} {RNA1310_37262, RNA1509_20225, RNA1509_28786, RNA1509_44147, RNA1509_45512} {RNA1509_20225, RNA1509_28786, RNA1509_44147, RNA1509_45512, RNA815_20538} | |
| 3. | MligTC455_50462 | 697 | 14.52 | Mlig455_007876, Mlig455_007979, Mlig455_021146 | Neo: - Age: logFC(26M/2M)=0.575 Region-enriched R4: 1.899/0.03615 |
0.963 | - | - | - | 0.963 | - | - | Mlig455_007876 {REF} {Length: 1922} {RNA1509_25746} {RNA1310_24431.1} {RNA815_8813.1} Mlig455_007979 {REF} {Length: 2471} {RNA1509_25746} {RNA1310_24431.1} {RNA815_8813.1} Mlig455_021146 {REF} {Length: 2129} {RNA1509_25746} {RNA1310_24431.1} {RNA815_8813.1} |
|
| 4. | MligTC455_44200 | 2039 | 42.48 | Mlig455_028060, Mlig455_028122 | Neo: - Age: logFC(26M/2M)=0.639 Region-enriched R4: 2.505/0.00026 Regeneration-depleted BL: -4.310 |
0.956 | - | - | - | 0.956 | - | - | Mlig455_028060 {REF} {Length: 1210} {RNA1509_16945, RNA1509_36375, RNA1509_37005, RNA1509_42816, RNA1509_42956, RNA1509_56773} {RNA1310_33727, RNA1509_16945, RNA1509_36375, RNA1509_37005, RNA1509_42816, RNA1509_42956, RNA1509_56773} {RNA1509_16945, RNA1509_36375, RNA1509_37005, RNA1509_42816, RNA1509_42956, RNA1509_56773, RNA815_13932} Mlig455_028122 {REF} {Length: 1116} {RNA1509_42816} {RNA1310_33727} {RNA815_13932} |
|
| 5. | MligTC455_50841 | 806 | 16.8 | Mlig455_050723 | Neo: - Age: Down-Up-Down |
0.951 | - | - | - | 0.951 | - | - | Mlig455_050723 {REF} {Length: 3445} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=27.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=24.7]} {Dmel: FBgn0017418, ari-1, ariadne 1, [Score=90.1, Expect=2e-18]} {Celegans: WBGene00013538, tag-349, [Score=85.9, Expect=4e-17]} {Smed: dd_Smed_v6_3281_0_1, dd_Smed_v6_3281_0_1, [RH, Score=109, Expect=3e-24]} {RNA1509_4455} {RNA1310_4182.1, RNA1509_4455} {RNA1509_4455, RNA815_1186} |