Data search
Results for MligTC455_19486
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19486 | 1510 | 31.45 | Mlig455_046176 | Neo: - Age: - |
Mlig455_046176 {REF} {Length: 3598} {TRANSSPLICED} {RNA1509_20225, RNA1509_28786, RNA1509_44147, RNA1509_45512} {RNA1310_37262, RNA1509_20225, RNA1509_28786, RNA1509_44147, RNA1509_45512} {RNA1509_20225, RNA1509_28786, RNA1509_44147, RNA1509_45512, RNA815_20538} |
Cumulative graph for MligTC455_19486
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.951 | 5.206 | 0.34079 | 0.98555 | |
| RegionR2 | 0.276 | 5.206 | 0.64871 | 0.98404 | |
| RegionR3 | 0.056 | 5.206 | 0.91213 | 1.00000 | |
| RegionR4 | 0.448 | 5.206 | 0.43830 | 0.76714 | |
| RegionR5 | 0.117 | 5.206 | 0.81133 | 1.00000 | |
| RegionR6 | 0.553 | 5.206 | 0.26372 | 0.85175 | |
| RegionR7 | 0.559 | 5.206 | 0.26501 | 0.89511 | |
| RegionR8 | -1.059 | 5.206 | 0.11141 | 0.61959 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.064 | 5.206 | 0.20166 | 0.94225 | |
| RegenerationR2 | -0.757 | 5.206 | 0.21531 | 0.66254 | |
| RegenerationR3 | -0.131 | 5.206 | 0.83715 | 0.99292 | |
| RegenerationR4 | -0.447 | 5.206 | 0.48732 | 0.86284 | |
| RegenerationR5 | -0.255 | 5.206 | 0.68094 | 0.94415 | |
| RegenerationR6 | -1.106 | 5.206 | 0.08516 | 0.36537 | |
| RegenerationBL | -1.232 | 5.206 | 0.05171 | 0.26207 | |
| RegenerationTP | -0.266 | 5.206 | 0.68385 | 1.00000 |
Genes with expression patterns similar to MligTC455_19486
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19486 | 1510 | 31.45 | Mlig455_046176 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046176 {REF} {Length: 3598} {TRANSSPLICED} {RNA1509_20225, RNA1509_28786, RNA1509_44147, RNA1509_45512} {RNA1310_37262, RNA1509_20225, RNA1509_28786, RNA1509_44147, RNA1509_45512} {RNA1509_20225, RNA1509_28786, RNA1509_44147, RNA1509_45512, RNA815_20538} | |
| 2. | MligTC455_35790 | 822 | 17.12 | Mlig455_018903 | Neo: - Age: logFC(26M/2M)=-0.352 |
CCM2 | 1.763 | - | - | 0.810 | 0.953 | - | - | Mlig455_018903 {REF} {Length: 794} {TRANSSPLICED} {Pfam: Cerebral cavernous malformation protein, harmonin-homology [PF16545.7, score=30.7]} {Human: ENSG00000136280, CCM2, CCM2 scaffold protein, [Score=42.7, Expect=1e-05]} {RNA1509_35075} {RNA1310_39188, RNA1509_35075} {RNA1509_35075, RNA815_35459} |
| 3. | MligTC455_47749 | 892 | 18.58 | Mlig455_028875 | Neo: - Age: Down-Up-Down |
1.703 | - | - | 0.955 | 0.748 | - | - | Mlig455_028875 {REF} {Length: 1608} {RNA1509_24468, RNA1509_43432, RNA1509_49009} {RNA1310_32782, RNA1509_24468, RNA1509_43432, RNA1509_49009} {RNA1509_24468, RNA1509_43432, RNA1509_49009, RNA815_15171.1} | |
| 4. | MligTC455_52992 | 1874 | 39.04 | Mlig455_020430, Mlig455_020441 | Neo: - Age: Down-Down-Up |
BRK1 | 1.689 | - | - | - | 0.953 | - | 0.736 | Mlig455_020430 {REF} {Length: 572} {TRANSSPLICED} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=23.2]} {Human: ENSG00000254999, BRK1, BRICK1, SCAR/WAVE actin nucleating complex subunit, [RH, Score=87.8, Expect=4e-24]} {Mouse: ENSMUSG00000033940, Brk1, BRICK1, SCAR/WAVE actin-nucleating complex subunit, [RH, Score=88.6, Expect=2e-24]} {Dmel: FBgn0061198, HSPC300, Haematopoietic stem/progenitor cell protein 300, [RH, Score=85.5, Expect=2e-23]} {Celegans: WBGene00013308, nuo-3, NADH Ubiquinone Oxidoreductase, [RH, Score=70.1, Expect=2e-17]} {Smed: dd_Smed_v6_1835_0_1, dd_Smed_v6_1835_0_1, [RH, Score=68.2, Expect=6e-17]} {RNA1509_8330} {RNA1310_46221, RNA1509_8330} {RNA1509_8330, RNA815_31100} Mlig455_020441 {REF} {Length: 571} {TRANSSPLICED} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=23.2]} {Human: ENSG00000254999, BRK1, BRICK1, SCAR/WAVE actin nucleating complex subunit, [RH, Score=87.8, Expect=4e-24]} {Mouse: ENSMUSG00000033940, Brk1, BRICK1, SCAR/WAVE actin-nucleating complex subunit, [RH, Score=88.6, Expect=2e-24]} {Dmel: FBgn0061198, HSPC300, Haematopoietic stem/progenitor cell protein 300, [RH, Score=85.5, Expect=2e-23]} {Celegans: WBGene00013308, nuo-3, NADH Ubiquinone Oxidoreductase, [RH, Score=70.1, Expect=2e-17]} {Smed: dd_Smed_v6_1835_0_1, dd_Smed_v6_1835_0_1, [RH, Score=68.2, Expect=6e-17]} {RNA1509_8330} {RNA1310_46221} {RNA815_31100} |
| 5. | MligTC455_17963 | 584 | 12.16 | Mlig455_049086 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.446/0.04930 |
ABCG2 | 1.668 | - | - | - | - | 0.710 | 0.958 | Mlig455_049086 {REF} {Length: 3159} {Pfam: ABC-2 type transporter [PF01061.26, score=135.0]; ABC transporter [PF00005.29, score=78.2]; ABC-2 type transporter [PF19055.2, score=69.9]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=34.8]; RecF/RecN/SMC N terminal domain [PF02463.21, score=26.0]; AAA domain [PF13476.8, score=20.8]; ABC-2 family transporter protein [PF12698.9, score=19.8]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [RH, Score=595, Expect=0.0]} {Mouse: ENSMUSG00000029802, Abcg2, ATP binding cassette subfamily G member 2 (Junior blood group), [RH, Score=583, Expect=0.0]} {Dmel: FBgn0003996, w, white, [RH, Score=284, Expect=4e-86]} {Celegans: WBGene00012925, wht-8, WHiTe (Drosophila) related ABC transporter, [RH, Score=262, Expect=8e-79]} {Smed: dd_Smed_v6_4225_0_1, dd_Smed_v6_4225_0_1, [Score=553, Expect=0.0]} {RNA1509_28179, RNA1509_9773} {RNA1310_7804.1, RNA1509_28179, RNA1509_9773} {RNA1509_28179, RNA1509_9773, RNA815_3051} |
| 6. | MligTC455_28048 | 559 | 11.64 | Mlig455_054717 | Neo: - Age: Down-Up-Down |
0.967 | - | - | - | - | - | 0.967 | Mlig455_054717 {REF} {Length: 6438} {Pfam: Syndecan domain [PF01034.22, score=37.3]; SEA domain [PF01390.22, score=32.1]; Thyroglobulin type-1 repeat [PF00086.20, score=18.4]} {Dmel: FBgn0010415, Sdc, Syndecan, [Score=50.8, Expect=9e-07]} {Smed: dd_Smed_v6_14098_0_1, dd_Smed_v6_14098_0_1, [Score=77.0, Expect=2e-15]} {RNA1509_19683} {RNA1310_22787.1} {RNA815_5677.1} | |
| 7. | MligTC455_44201 | 666 | 13.88 | Mlig455_028290 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.515 Region-enriched R4: 3.067/0.00110 Regeneration-downregulated BL: -4.747 Regeneration-depleted BL: -4.747 |
0.958 | - | - | - | 0.958 | - | - | Mlig455_028290 {REF} {Length: 1226} {RNA1509_25517, RNA1509_42816} {RNA1310_33727, RNA1509_25517} {RNA1509_25517, RNA815_13932} | |
| 8. | MligTC455_17325 | 946 | 19.7 | Mlig455_020480 | Neo: - Age: Down-Up-Up Region-enriched R5: 2.284/0.00000 |
0.957 | - | - | - | 0.957 | - | - | Mlig455_020480 {REF} {Length: 922} {TRANSSPLICED} {RNA1509_31242} {RNA1310_36884, RNA1509_31242} {RNA1509_31242, RNA815_22323} | |
| 9. | MligTC455_26282 | 437 | 9.11 | Mlig455_022891 | Neo: - Age: - |
CYP2E1 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_022891 {REF} {Length: 2781} {Pfam: Cytochrome P450 [PF00067.24, score=319.0]} {Human: ENSG00000130649, CYP2E1, cytochrome P450 family 2 subfamily E member 1, [Score=237, Expect=1e-71]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=234, Expect=1e-70]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=226, Expect=2e-67]} {Mouse: ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=243, Expect=8e-74]; ENSMUSG00000049685, Cyp2g1, cytochrome P450, family 2, subfamily g, polypeptide 1, [Score=243, Expect=8e-74]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=243, Expect=9e-74]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=241, Expect=5e-73]; ENSMUSG00000040650, Cyp2b23, cytochrome P450, family 2, subfamily b, polypeptide 23, [Score=233, Expect=3e-70]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=233, Expect=7e-70]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=213, Expect=2e-62]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=217, Expect=2e-64]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [RH, Score=282, Expect=5e-89]} {RNA1509_11252, RNA1509_24961, RNA1509_32151, RNA1509_53462} {RNA1310_13284, RNA1509_11252, RNA1509_24961, RNA1509_32151, RNA1509_53462} {RNA1509_11252, RNA1509_24961, RNA1509_32151, RNA1509_53462, RNA815_723} |
| 10. | MligTC455_28309 | 78 | 1.63 | Mlig455_021915 | Neo: - Age: Up-Down-Up |
FAT3 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_021915 {REF} {Length: 12300} {Pfam: Cadherin domain [PF00028.19, score=270.9]; Cadherin-like [PF16184.7, score=24.6]} {Human: ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=241, Expect=2e-65]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=241, Expect=2e-65]; ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=238, Expect=2e-64]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=246, Expect=3e-67]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=243, Expect=2e-66]} {Dmel: FBgn0261574, kug, kugelei, [Score=245, Expect=3e-67]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=193, Expect=2e-50]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=196, Expect=2e-51]} {RNA1509_14139} {RNA1310_570.1} {RNA815_134.1} |
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