TomoSeq data search

Data search

Results for MligTC455_35808

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_35808	493	10.27	Mlig455_061957	Neo: Int S/G2/M Age: -	PSMD5	Mlig455_061957 {REF} {Length: 1972} {TRANSSPLICED} {Pfam: Proteasome non-ATPase 26S subunit [PF10508.11, score=113.9]} {Human: ENSG00000095261, PSMD5, proteasome 26S subunit, non-ATPase 5, [RH, Score=115, Expect=4e-27]} {Mouse: ENSMUSG00000026869, Psmd5, proteasome (prosome, macropain) 26S subunit, non-ATPase, 5, [RH, Score=111, Expect=1e-25]} {Dmel: FBgn0030457, CG12096, [RH, Score=68.9, Expect=4e-12]} {RNA1509_19695, RNA1509_22815} {RNA1310_15225, RNA1509_19695} {RNA1509_19695, RNA815_6007.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_35808

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.271	3.817	0.79697	1.00000
RegionR2	0.147	3.817	0.78252	1.00000
RegionR3	-0.584	3.817	0.20324	0.74332
RegionR4	0.936	3.817	0.03252	0.14380
RegionR5	0.377	3.817	0.30559	0.64235
RegionR6	-0.544	3.817	0.24596	0.83150
RegionR7	-0.135	3.817	0.82473	1.00000
RegionR8	-0.468	3.817	0.58162	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.407	3.817	0.06025	0.72677
RegenerationR2	-0.382	3.817	0.38513	0.80510
RegenerationR3	0.497	3.817	0.31475	0.74483
RegenerationR4	-0.665	3.817	0.14136	0.56372
RegenerationR5	-0.128	3.817	0.75550	0.97346
RegenerationR6	0.812	3.817	0.09678	0.38690
RegenerationBL	0.757	3.817	0.19317	0.52854
RegenerationTP	0.41	3.817	0.54949	0.93247

Genes with expression patterns similar to MligTC455_35808

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35808	493	10.27	Mlig455_061957	Neo: Int S/G2/M Age: -	PSMD5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_061957 {REF} {Length: 1972} {TRANSSPLICED} {Pfam: Proteasome non-ATPase 26S subunit [PF10508.11, score=113.9]} {Human: ENSG00000095261, PSMD5, proteasome 26S subunit, non-ATPase 5, [RH, Score=115, Expect=4e-27]} {Mouse: ENSMUSG00000026869, Psmd5, proteasome (prosome, macropain) 26S subunit, non-ATPase, 5, [RH, Score=111, Expect=1e-25]} {Dmel: FBgn0030457, CG12096, [RH, Score=68.9, Expect=4e-12]} {RNA1509_19695, RNA1509_22815} {RNA1310_15225, RNA1509_19695} {RNA1509_19695, RNA815_6007.1}
2.	MligTC455_17650	1008	20.99	Mlig455_049663, Mlig455_052831	Neo: Int S/G2/M Age: - Region-enriched R4: 2.397/0.00001 Region-enriched R5: 1.079/0.02366	MED10	1.69	-	-	-	-	0.730	0.960	Mlig455_049663 {REF} {Length: 661} {TRANSSPLICED} {Pfam: Transcription factor subunit Med10 of Mediator complex [PF09748.11, score=98.2]} {Human: ENSG00000133398, MED10, mediator complex subunit 10, [RH, Score=138, Expect=2e-42]} {Mouse: ENSMUSG00000021598, Med10, mediator complex subunit 10, [RH, Score=139, Expect=1e-42]} {Dmel: FBgn0036581, MED10, Mediator complex subunit 10, [RH, Score=108, Expect=9e-31]} {Celegans: WBGene00007014, mdt-10, Mediator of RNA polymerase II transcription subunit 10, [RH, Score=92.0, Expect=5e-24]} {Smed: dd_Smed_v6_5622_0_1, dd_Smed_v6_5622_0_1, [RH, Score=130, Expect=3e-39]} {RNA1509_21767, RNA1509_32607, RNA1509_44155} {RNA1310_57954.1, RNA1509_21767, RNA1509_44155} {RNA1509_21767, RNA1509_44155, RNA815_28335} Mlig455_052831 {REF} {Length: 505} {TRANSSPLICED} {Pfam: Transcription factor subunit Med10 of Mediator complex [PF09748.11, score=98.2]} {Human: ENSG00000133398, MED10, mediator complex subunit 10, [RH, Score=138, Expect=2e-42]} {Mouse: ENSMUSG00000021598, Med10, mediator complex subunit 10, [RH, Score=139, Expect=1e-42]} {Dmel: FBgn0036581, MED10, Mediator complex subunit 10, [RH, Score=108, Expect=9e-31]} {Celegans: WBGene00007014, mdt-10, Mediator of RNA polymerase II transcription subunit 10, [RH, Score=92.0, Expect=5e-24]} {Smed: dd_Smed_v6_5622_0_1, dd_Smed_v6_5622_0_1, [RH, Score=130, Expect=3e-39]} {RNA1509_44202} {RNA1310_57954.1, RNA1509_44202} {RNA1509_44202, RNA815_28335}
3.	MligTC455_30071	419	8.73	Mlig455_004694	Neo: Int S/G2/M Age: -	TOP3A	0.965	-	-	-	0.965	-	-	Mlig455_004694 {REF} {Length: 4052} {TRANSSPLICED} {Pfam: DNA topoisomerase [PF01131.22, score=365.2]; GRF zinc finger [PF06839.14, score=114.9]; Toprim domain [PF01751.24, score=65.1]; Topoisomerase DNA binding C4 zinc finger [PF01396.21, score=37.6]} {Human: ENSG00000284238, TOP3A, DNA topoisomerase III alpha, [RH, Score=940, Expect=0.0]; ENSG00000177302, TOP3A, DNA topoisomerase III alpha, [RH, Score=940, Expect=0.0]} {Mouse: ENSMUSG00000002814, Top3a, topoisomerase (DNA) III alpha, [RH, Score=947, Expect=0.0]} {Dmel: FBgn0040268, Top3alpha, Topoisomerase 3alpha, [RH, Score=776, Expect=0.0]} {Celegans: WBGene00006596, top-3, DNA topoisomerase 3, [RH, Score=635, Expect=0.0]} {Smed: dd_Smed_v6_20479_0_1, dd_Smed_v6_20479_0_1, [RH, Score=641, Expect=0.0]} {RNA1509_11005} {RNA1310_4689.1} {RNA815_5623}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_35808

493

10.27

Mlig455_061957

Neo: Int S/G2/M

Age: -

PSMD5

1.000

MligTC455_17650

1008

20.99

Mlig455_049663, Mlig455_052831

Neo: Int S/G2/M

Age: -

Region-enriched R4: 2.397/0.00001
Region-enriched R5: 1.079/0.02366

MED10

1.69

0.730

0.960

Mlig455_049663 {REF} {Length: 661} {TRANSSPLICED} {Pfam: Transcription factor subunit Med10 of Mediator complex [PF09748.11, score=98.2]} {Human: ENSG00000133398, MED10, mediator complex subunit 10, [RH, Score=138, Expect=2e-42]} {Mouse: ENSMUSG00000021598, Med10, mediator complex subunit 10, [RH, Score=139, Expect=1e-42]} {Dmel: FBgn0036581, MED10, Mediator complex subunit 10, [RH, Score=108, Expect=9e-31]} {Celegans: WBGene00007014, mdt-10, Mediator of RNA polymerase II transcription subunit 10, [RH, Score=92.0, Expect=5e-24]} {Smed: dd_Smed_v6_5622_0_1, dd_Smed_v6_5622_0_1, [RH, Score=130, Expect=3e-39]} {RNA1509_21767, RNA1509_32607, RNA1509_44155} {RNA1310_57954.1, RNA1509_21767, RNA1509_44155} {RNA1509_21767, RNA1509_44155, RNA815_28335}

Mlig455_052831 {REF} {Length: 505} {TRANSSPLICED} {Pfam: Transcription factor subunit Med10 of Mediator complex [PF09748.11, score=98.2]} {Human: ENSG00000133398, MED10, mediator complex subunit 10, [RH, Score=138, Expect=2e-42]} {Mouse: ENSMUSG00000021598, Med10, mediator complex subunit 10, [RH, Score=139, Expect=1e-42]} {Dmel: FBgn0036581, MED10, Mediator complex subunit 10, [RH, Score=108, Expect=9e-31]} {Celegans: WBGene00007014, mdt-10, Mediator of RNA polymerase II transcription subunit 10, [RH, Score=92.0, Expect=5e-24]} {Smed: dd_Smed_v6_5622_0_1, dd_Smed_v6_5622_0_1, [RH, Score=130, Expect=3e-39]} {RNA1509_44202} {RNA1310_57954.1, RNA1509_44202} {RNA1509_44202, RNA815_28335}

MligTC455_30071

419

8.73

Mlig455_004694

Neo: Int S/G2/M

Age: -

TOP3A

0.965

Mlig455_004694 {REF} {Length: 4052} {TRANSSPLICED} {Pfam: DNA topoisomerase [PF01131.22, score=365.2]; GRF zinc finger [PF06839.14, score=114.9]; Toprim domain [PF01751.24, score=65.1]; Topoisomerase DNA binding C4 zinc finger [PF01396.21, score=37.6]} {Human: ENSG00000284238, TOP3A, DNA topoisomerase III alpha, [RH, Score=940, Expect=0.0]; ENSG00000177302, TOP3A, DNA topoisomerase III alpha, [RH, Score=940, Expect=0.0]} {Mouse: ENSMUSG00000002814, Top3a, topoisomerase (DNA) III alpha, [RH, Score=947, Expect=0.0]} {Dmel: FBgn0040268, Top3alpha, Topoisomerase 3alpha, [RH, Score=776, Expect=0.0]} {Celegans: WBGene00006596, top-3, DNA topoisomerase 3, [RH, Score=635, Expect=0.0]} {Smed: dd_Smed_v6_20479_0_1, dd_Smed_v6_20479_0_1, [RH, Score=641, Expect=0.0]} {RNA1509_11005} {RNA1310_4689.1} {RNA815_5623}