TomoSeq data search

Data search

Results for MligTC455_35815

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_35815

877

18.27

Mlig455_035055, Mlig455_035076

Neo: -

Age: -

LYST

Mlig455_035055 {REF} {Length: 9148} {Pfam: Beige/BEACH domain [PF02138.20, score=364.8]; PH domain associated with Beige/BEACH [PF14844.8, score=69.8]} {Human: ENSG00000143669, LYST, lysosomal trafficking regulator, [RH, Score=679, Expect=0.0]} {Mouse: ENSMUSG00000019726, Lyst, lysosomal trafficking regulator, [RH, Score=664, Expect=0.0]} {Dmel: FBgn0265988, mv, mauve, [RH, Score=454, Expect=9e-128]} {Celegans: WBGene00007752, wdfy-3, WD40 and FYVE domain protein, [Score=362, Expect=8e-100]} {Smed: dd_Smed_v6_7819_0_1, dd_Smed_v6_7819_0_1, [RH, Score=423, Expect=1e-123]} {RNA1509_27538, RNA1509_4907} {RNA1310_255.1, RNA1509_27538} {RNA1509_27538, RNA815_8084}

Mlig455_035076 {REF} {Length: 12834} {TRANSSPLICED} {Pfam: Beige/BEACH domain [PF02138.20, score=365.6]; PH domain associated with Beige/BEACH [PF14844.8, score=71.5]} {Human: ENSG00000143669, LYST, lysosomal trafficking regulator, [RH, Score=688, Expect=0.0]} {Mouse: ENSMUSG00000019726, Lyst, lysosomal trafficking regulator, [RH, Score=672, Expect=0.0]} {Dmel: FBgn0265988, mv, mauve, [RH, Score=475, Expect=9e-134]} {Celegans: WBGene00007752, wdfy-3, WD40 and FYVE domain protein, [Score=365, Expect=1e-100]} {Smed: dd_Smed_v6_7819_0_1, dd_Smed_v6_7819_0_1, [RH, Score=422, Expect=4e-123]} {RNA1509_4907} {RNA1310_255.1, RNA1509_4907} {RNA1509_4907, RNA815_7875}

Cumulative graph for MligTC455_35815

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.29	4.533	0.15298	0.76932
RegionR2	-0.175	4.533	0.72108	1.00000
RegionR3	-0.648	4.533	0.10066	0.55574
RegionR4	0.084	4.533	0.85054	1.00000
RegionR5	0.364	4.533	0.27751	0.60457
RegionR6	0.114	4.533	0.76849	1.00000
RegionR7	-0.296	4.533	0.56122	1.00000
RegionR8	-0.733	4.533	0.29697	0.92629

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.329	4.533	0.01366	0.49433
RegenerationR2	0.652	4.533	0.11085	0.52047
RegenerationR3	1.048	4.533	0.02476	0.28303
RegenerationR4	0.617	4.533	0.18281	0.62369
RegenerationR5	0.593	4.533	0.15557	0.57578
RegenerationR6	0.332	4.533	0.44518	0.76733
RegenerationBL	-1.091	4.533	0.09802	0.36774
RegenerationTP	0.024	4.533	0.97096	1.00000

Genes with expression patterns similar to MligTC455_35815

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35815	877	18.27	Mlig455_035055, Mlig455_035076	Neo: - Age: -	LYST	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_035055 {REF} {Length: 9148} {Pfam: Beige/BEACH domain [PF02138.20, score=364.8]; PH domain associated with Beige/BEACH [PF14844.8, score=69.8]} {Human: ENSG00000143669, LYST, lysosomal trafficking regulator, [RH, Score=679, Expect=0.0]} {Mouse: ENSMUSG00000019726, Lyst, lysosomal trafficking regulator, [RH, Score=664, Expect=0.0]} {Dmel: FBgn0265988, mv, mauve, [RH, Score=454, Expect=9e-128]} {Celegans: WBGene00007752, wdfy-3, WD40 and FYVE domain protein, [Score=362, Expect=8e-100]} {Smed: dd_Smed_v6_7819_0_1, dd_Smed_v6_7819_0_1, [RH, Score=423, Expect=1e-123]} {RNA1509_27538, RNA1509_4907} {RNA1310_255.1, RNA1509_27538} {RNA1509_27538, RNA815_8084} Mlig455_035076 {REF} {Length: 12834} {TRANSSPLICED} {Pfam: Beige/BEACH domain [PF02138.20, score=365.6]; PH domain associated with Beige/BEACH [PF14844.8, score=71.5]} {Human: ENSG00000143669, LYST, lysosomal trafficking regulator, [RH, Score=688, Expect=0.0]} {Mouse: ENSMUSG00000019726, Lyst, lysosomal trafficking regulator, [RH, Score=672, Expect=0.0]} {Dmel: FBgn0265988, mv, mauve, [RH, Score=475, Expect=9e-134]} {Celegans: WBGene00007752, wdfy-3, WD40 and FYVE domain protein, [Score=365, Expect=1e-100]} {Smed: dd_Smed_v6_7819_0_1, dd_Smed_v6_7819_0_1, [RH, Score=422, Expect=4e-123]} {RNA1509_4907} {RNA1310_255.1, RNA1509_4907} {RNA1509_4907, RNA815_7875}
2.	MligTC455_49305	730	15.2	Mlig455_001486	Neo: - Age: -	RICTOR	2.563	0.740	-	-	0.968	-	0.855	Mlig455_001486 {REF} {Length: 6051} {Pfam: Rapamycin-insensitive companion of mTOR, N-term [PF14664.8, score=199.3]; Rapamycin-insensitive companion of mTOR RasGEF_N domain [PF14663.8, score=86.4]; Rapamycin-insensitive companion of mTOR, domain 5 [PF14668.8, score=84.0]; Rapamycin-insensitive companion of mTOR, middle domain [PF14666.8, score=46.7]} {Human: ENSG00000164327, RICTOR, RPTOR independent companion of MTOR complex 2, [RH, Score=473, Expect=2e-140]} {Mouse: ENSMUSG00000050310, Rictor, RPTOR independent companion of MTOR, complex 2, [RH, Score=473, Expect=8e-141]} {Dmel: FBgn0031006, rictor, rapamycin-insensitive companion of Tor, [RH, Score=164, Expect=3e-40]} {Celegans: WBGene00009245, rict-1, [RH, Score=134, Expect=2e-31]} {Smed: dd_Smed_v6_9324_0_6, dd_Smed_v6_9324_0_6, [RH, Score=258, Expect=2e-69]} {RNA1509_8203, RNA1509_9823} {RNA1310_478, RNA1509_8203, RNA1509_9823} {RNA1509_8203, RNA1509_9823, RNA815_1245}
3.	MligTC455_47371	539	11.23	Mlig455_051289	Neo: - Age: logFC(26M/2M)=0.480 Region-enriched R5: 1.199/0.00193 Region-enriched R4: 1.181/0.04671	PIPOX	1.763	-	-	-	-	0.809	0.954	Mlig455_051289 {REF} {Length: 2874} {TRANSSPLICED} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=348.8]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=53.3]; Flavin containing amine oxidoreductase [PF01593.26, score=52.6]; HI0933-like protein [PF03486.16, score=40.7]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=38.2]; FAD-NAD(P)-binding [PF13454.8, score=36.5]; FAD binding domain [PF00890.26, score=32.5]; FAD binding domain [PF01494.21, score=27.8]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=23.9]; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain [PF02737.20, score=22.2]; Ketopantoate reductase PanE/ApbA [PF02558.18, score=22.1]; Glucose inhibited division protein A [PF01134.24, score=21.6]} {Human: ENSG00000179761, PIPOX, pipecolic acid and sarcosine oxidase, [RH, Score=253, Expect=3e-76]} {Mouse: ENSMUSG00000017453, Pipox, pipecolic acid oxidase, [RH, Score=250, Expect=3e-75]} {Celegans: WBGene00015783, C15B12.1, Putative sarcosine oxidase, [RH, Score=203, Expect=4e-58]} {RNA1509_43148} {RNA1310_18619.1} {RNA815_18141}
4.	MligTC455_51253	350	7.29	Mlig455_002306	Neo: - Age: logFC(26M/2M)=0.235	CYP17A1	1.739	-	-	-	0.978	-	0.761	Mlig455_002306 {REF} {Length: 2440} {Pfam: Cytochrome P450 [PF00067.24, score=320.2]} {Human: ENSG00000148795, CYP17A1, cytochrome P450 family 17 subfamily A member 1, [RH, Score=191, Expect=6e-54]} {Mouse: ENSMUSG00000003555, Cyp17a1, cytochrome P450, family 17, subfamily a, polypeptide 1, [RH, Score=193, Expect=5e-55]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=144, Expect=7e-37]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=150, Expect=2e-39]} {Smed: dd_Smed_v6_2162_0_1, dd_Smed_v6_2162_0_1, [RH, Score=174, Expect=3e-48]} {RNA1509_10663} {RNA1310_10865, RNA1509_10663} {RNA1509_10663, RNA815_3718}
5.	MligTC455_31159	230	4.8	Mlig455_019494, Mlig455_066901	Neo: - Age: -	DHX36, TTK	1.696	-	-	-	-	0.730	0.966	Mlig455_019494 {REF} {Length: 1811} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=134.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=53.4]} {Human: ENSG00000112742, TTK, TTK protein kinase, [RH, Score=129, Expect=1e-30]} {Mouse: ENSMUSG00000038379, Ttk, Ttk protein kinase, [RH, Score=139, Expect=4e-34]} {Dmel: FBgn0000063, Mps1, Monopolar spindle 1, [RH, Score=124, Expect=2e-29]} {Celegans: WBGene00013994, ZK524.4, [Score=85.9, Expect=3e-17]} {Smed: dd_Smed_v6_9041_0_1, dd_Smed_v6_9041_0_1, [Score=87.4, Expect=9e-19]} {RNA1509_28050} {RNA1310_12256} {RNA815_12520} Mlig455_066901 {REF} {Length: 7246} {Pfam: Protein kinase domain [PF00069.27, score=131.6]; Helicase associated domain (HA2) [PF04408.25, score=62.2]; Helicase conserved C-terminal domain [PF00271.33, score=57.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=51.2]; DEAD/DEAH box helicase [PF00270.31, score=43.1]} {Human: ENSG00000174953, DHX36, DEAH-box helicase 36, [RH, Score=451, Expect=9e-139]} {Mouse: ENSMUSG00000027770, Dhx36, DEAH (Asp-Glu-Ala-His) box polypeptide 36, [Score=469, Expect=2e-143]} {Dmel: FBgn0032883, Rhau, RHAU helicase, [RH, Score=461, Expect=4e-141]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [Score=295, Expect=3e-81]} {Smed: dd_Smed_v6_4815_0_2, dd_Smed_v6_4815_0_2, [Score=334, Expect=2e-93]} {RNA1509_6035} {RNA1310_2472.1} {RNA815_1474}
6.	MligTC455_17484	291	6.07	Mlig455_011788, Mlig455_013019	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.389	ARNT, ARNT2	0.955	-	-	-	0.955	-	-	Mlig455_011788 {REF} {Length: 3032} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=21.7} {Pfam: PAS fold [PF08447.14, score=49.6]; Helix-loop-helix DNA-binding domain [PF00010.28, score=49.1]; PAS fold [PF00989.27, score=46.7]; PAS fold [PF08448.12, score=32.6]; PAS domain [PF14598.8, score=28.5]; PAS domain [PF13426.9, score=20.3]} {Human: ENSG00000143437, ARNT, aryl hydrocarbon receptor nuclear translocator, [RH, Score=338, Expect=6e-106]; ENSG00000172379, ARNT2, aryl hydrocarbon receptor nuclear translocator 2, [RH, Score=335, Expect=3e-105]} {Mouse: ENSMUSG00000015522, Arnt, aryl hydrocarbon receptor nuclear translocator, [RH, Score=337, Expect=2e-105]; ENSMUSG00000015709, Arnt2, aryl hydrocarbon receptor nuclear translocator 2, [RH, Score=333, Expect=9e-105]} {Dmel: FBgn0264075, tgo, tango, [RH, Score=362, Expect=2e-116]} {Celegans: WBGene00000095, aha-1, Aryl hydrocarbon receptor nuclear translocator homolog, [RH, Score=278, Expect=9e-87]} {Smed: dd_Smed_v6_9171_0_1, dd_Smed_v6_9171_0_1, [RH, Score=378, Expect=2e-122]} {RNA1509_46779} {RNA1310_12680, RNA1509_46779} {RNA1509_46779, RNA815_8463} Mlig455_013019 {REF} {Length: 3005} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=21.7} {Pfam: PAS fold [PF08447.14, score=49.2]; PAS fold [PF00989.27, score=46.0]; PAS fold [PF08448.12, score=30.2]; PAS domain [PF14598.8, score=27.7]; Helix-loop-helix DNA-binding domain [PF00010.28, score=22.7]} {Human: ENSG00000172379, ARNT2, aryl hydrocarbon receptor nuclear translocator 2, [Score=303, Expect=6e-94]; ENSG00000143437, ARNT, aryl hydrocarbon receptor nuclear translocator, [Score=301, Expect=2e-92]} {Mouse: ENSMUSG00000015522, Arnt, aryl hydrocarbon receptor nuclear translocator, [RH, Score=298, Expect=1e-91]} {Dmel: FBgn0264075, tgo, tango, [Score=324, Expect=3e-103]} {Celegans: WBGene00000095, aha-1, Aryl hydrocarbon receptor nuclear translocator homolog, [Score=242, Expect=6e-74]} {Smed: dd_Smed_v6_9171_0_1, dd_Smed_v6_9171_0_1, [Score=324, Expect=9e-103]} {RNA1509_20140} {RNA1310_12680} {RNA815_8463}
7.	MligTC455_12264	440	9.18	Mlig455_066614	Neo: - Age: - Region-enriched R4: 2.233/0.02565 Region-enriched R5: 1.752/0.03591		0.954	-	-	-	-	-	0.954	Mlig455_066614 {REF} {Length: 460} {TRANSSPLICED} {RNA1509_36180} {RNA1310_59859, RNA1509_36180} {RNA1509_36180, RNA815_40987}
8.	MligTC455_35291	234	4.88	Mlig455_027788, Mlig455_063457	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.963 Region-enriched R4: 3.530/0.01207 Region-enriched R5: 2.680/0.00642	TMEM9	0.954	-	-	-	0.954	-	-	Mlig455_027788 {REF} {Length: 2035} {TRANSSPLICED} {Pfam: TMEM9 [PF05434.13, score=50.6]} {RNA1509_36378} {RNA1310_37814.1, RNA1509_36378} {RNA1509_36378, RNA815_28046} Mlig455_063457 {REF} {Length: 2038} {TRANSSPLICED} {Pfam: TMEM9 [PF05434.13, score=65.9]} {Human: ENSG00000116857, TMEM9, transmembrane protein 9, [Score=46.6, Expect=8e-06]} {Celegans: WBGene00020026, R12C12.6, [RH, Score=57.0, Expect=2e-09]} {RNA1509_36378} {RNA1310_37814.1} {RNA815_28046}
9.	MligTC455_23257	429	8.94	Mlig455_048632	Neo: - Age: logFC(26M/2M)=-0.515 Region-enriched R4: 3.681/0.00001 Region-enriched R5: 1.663/0.00659		0.953	-	-	-	-	-	0.953	Mlig455_048632 {REF} {Length: 6170} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=24.7]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=20.5]} {RNA1509_8517} {RNA1310_2320.1} {RNA815_744}
10.	MligTC455_46090	1157	24.1	Mlig455_034703	Neo: - Age: -	KLF10	0.953	-	-	-	0.953	-	-	Mlig455_034703 {REF} {Length: 2186} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=46.9]; Zinc-finger double domain [PF13465.8, score=41.5]; C2H2-type zinc finger [PF13894.8, score=32.3]} {Human: ENSG00000155090, KLF10, Kruppel like factor 10, [Score=145, Expect=4e-39]; ENSG00000105610, KLF1, Kruppel like factor 1, [Score=139, Expect=1e-37]} {Mouse: ENSMUSG00000037465, Klf10, Kruppel-like factor 10, [RH, Score=143, Expect=2e-38]} {Dmel: FBgn0043364, cbt, cabut, [RH, Score=142, Expect=2e-38]} {Celegans: WBGene00018990, klf-1, Kruppel-Like Factor (Zinc finger protein), [Score=130, Expect=7e-34]} {Smed: dd_Smed_v6_3638_0_1, dd_Smed_v6_3638_0_1, [RH, Score=132, Expect=3e-37]} {RNA1509_15495, RNA1509_53521, RNA1509_54191, RNA1509_55717} {RNA1310_13888, RNA1509_15495, RNA1509_53521, RNA1509_54191, RNA1509_55717} {RNA1509_15495, RNA1509_53521, RNA1509_54191, RNA1509_55717, RNA815_19280}
11.	MligTC455_48282	729	15.19	Mlig455_026572, Mlig455_027325	Neo: - Age: Up-Up-Down	VMP1	0.951	-	-	-	-	-	0.951	Mlig455_026572 {REF} {Length: 7165} {Pfam: SAP domain [PF02037.29, score=41.2]; SNARE associated Golgi protein [PF09335.13, score=32.8]; SAP domain-containing new25 [PF18953.2, score=19.7]} {Human: ENSG00000062716, VMP1, vacuole membrane protein 1, [RH, Score=381, Expect=5e-128]} {Mouse: ENSMUSG00000018171, Vmp1, vacuole membrane protein 1, [RH, Score=387, Expect=9e-131]} {Dmel: FBgn0052675, Tango5, Transport and Golgi organization 5, [RH, Score=379, Expect=7e-126]} {Celegans: WBGene00012559, epg-3, Ectopic P granules protein 3, [RH, Score=371, Expect=7e-124]} {Smed: dd_Smed_v6_1156_0_1, dd_Smed_v6_1156_0_1, [RH, Score=281, Expect=6e-90]} {RNA1509_24070} {RNA1310_16761} {RNA815_1510} Mlig455_027325 {REF} {Length: 6928} {Pfam: SAP domain [PF02037.29, score=41.2]; SNARE associated Golgi protein [PF09335.13, score=32.8]; SAP domain-containing new25 [PF18953.2, score=19.7]} {Human: ENSG00000062716, VMP1, vacuole membrane protein 1, [RH, Score=381, Expect=5e-128]} {Mouse: ENSMUSG00000018171, Vmp1, vacuole membrane protein 1, [RH, Score=387, Expect=8e-131]} {Dmel: FBgn0052675, Tango5, Transport and Golgi organization 5, [RH, Score=378, Expect=2e-125]} {Celegans: WBGene00012559, epg-3, Ectopic P granules protein 3, [RH, Score=371, Expect=9e-124]} {Smed: dd_Smed_v6_1156_0_1, dd_Smed_v6_1156_0_1, [RH, Score=281, Expect=7e-90]} {RNA1509_24070} {RNA1310_16761} {RNA815_1510}

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