Data search
Results for MligTC455_12264
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12264 | 440 | 9.18 | Mlig455_066614 | Neo: - Age: - Region-enriched R4: 2.233/0.02565 |
Mlig455_066614 {REF} {Length: 460} {TRANSSPLICED} {RNA1509_36180} {RNA1310_59859, RNA1509_36180} {RNA1509_36180, RNA815_40987} |
Cumulative graph for MligTC455_12264
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.98 | 3.651 | 0.04168 | 0.49356 | |
| RegionR2 | 0.44 | 3.651 | 0.62823 | 0.96953 | |
| RegionR3 | 1.097 | 3.651 | 0.14641 | 0.65108 | |
| RegionR4 | 2.233 | 3.651 | 0.00319 | 0.02565 | |
| RegionR5 | 1.752 | 3.651 | 0.00524 | 0.03591 | |
| RegionR6 | 0.937 | 3.651 | 0.25588 | 0.84091 | |
| RegionR7 | 1.171 | 3.651 | 0.16953 | 0.75813 | |
| RegionR8 | -0.651 | 3.651 | 0.96870 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.144 | 3.651 | 1.00000 | 1.00000 | |
| RegenerationR2 | -0.242 | 3.651 | 0.59909 | 0.91540 | |
| RegenerationR3 | -0.476 | 3.651 | 0.35364 | 0.77273 | |
| RegenerationR4 | -0.053 | 3.651 | 0.91540 | 1.00000 | |
| RegenerationR5 | -0.004 | 3.651 | 0.98582 | 1.00000 | |
| RegenerationR6 | -0.182 | 3.651 | 0.73271 | 0.94243 | |
| RegenerationBL | -0.752 | 3.651 | 0.29151 | 0.65364 | |
| RegenerationTP | 0.532 | 3.651 | 0.43549 | 0.85654 |
Genes with expression patterns similar to MligTC455_12264
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12264 | 440 | 9.18 | Mlig455_066614 | Neo: - Age: - Region-enriched R4: 2.233/0.02565 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_066614 {REF} {Length: 460} {TRANSSPLICED} {RNA1509_36180} {RNA1310_59859, RNA1509_36180} {RNA1509_36180, RNA815_40987} | |
| 2. | MligTC455_42531 | 336 | 7 | Mlig455_030594 | Neo: Int S/G2/M Age: Down-Up-Up |
ABT1 | 1.807 | - | - | - | 0.850 | - | 0.957 | Mlig455_030594 {REF} {Length: 1307} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=19.4]} {Human: ENSG00000146109, ABT1, activator of basal transcription 1, [RH, Score=99.8, Expect=1e-24]} {Mouse: ENSMUSG00000036376, Abt1, activator of basal transcription 1, [RH, Score=102, Expect=8e-26]} {Dmel: FBgn0052708, CG32708, [RH, Score=97.4, Expect=2e-24]} {Celegans: WBGene00019005, F57B10.8, [RH, Score=87.4, Expect=2e-20]} {Smed: dd_Smed_v6_1929_0_1, dd_Smed_v6_1929_0_1, [RH, Score=101, Expect=2e-26]} {RNA1509_15723} {RNA1310_48173.1} {RNA815_22694} |
| 3. | MligTC455_30659 | 7438 | 154.97 | Mlig455_008135, Mlig455_012766, Mlig455_021205, Mlig455_026385, Mlig455_035726, Mlig455_035727, Mlig455_067397, Mlig455_070688, Mlig455_070937 | Neo: - Age: Down-Up-Down Region-enriched R8: 1.647/0.04332 |
KMT5A | 0.973 | - | - | - | 0.973 | - | - | Mlig455_008135 {REF} {Length: 3237} {RNA1509_2996} {RNA1310_18007} {RNA815_15022} Mlig455_012766 {REF} {Length: 4660} {TRANSSPLICED} {RNA1509_2996} {RNA1310_18007} {RNA815_15022} Mlig455_021205 {REF} {Length: 3235} {RNA1509_2996} {RNA1310_18007} {RNA815_15022} Mlig455_026385 {REF} {Length: 2839} {TRANSSPLICED} {RNA1509_44078} {RNA1310_33930} {RNA815_15022} Mlig455_035726 {REF} {Length: 1020} {Pfam: SET domain [PF00856.30, score=45.1]} {Human: ENSG00000183955, KMT5A, lysine methyltransferase 5A, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000049327, Kmt5a, lysine methyltransferase 5A, [Score=64.7, Expect=2e-11]} {Dmel: FBgn0011474, PR-Set7, PR/SET domain containing protein 7, [Score=76.6, Expect=3e-15]} {Celegans: WBGene00004781, set-1, Histone-lysine N-methyltransferase set-1, [Score=77.0, Expect=2e-16]} {Smed: dd_Smed_v6_5677_0_1, dd_Smed_v6_5677_0_1, [Score=78.2, Expect=2e-16]} {RNA1509_2996} {RNA1310_18007} {RNA815_15022} Mlig455_035727 {REF} {Length: 2924} {TRANSSPLICED} {RNA1509_44078} {RNA1310_31019} {RNA815_15022} Mlig455_067397 {REF} {Length: 2535} {RNA1509_2996} {RNA1310_18007} {RNA815_15022} Mlig455_070688 {REF} {Length: 2537} {RNA1509_2996} {RNA1310_18007, RNA1509_2996} {RNA1509_2996, RNA815_15022} Mlig455_070937 {REF} {Length: 2433} {RNA1509_2996, RNA1509_31638} {RNA1310_18007, RNA1509_31638} {RNA1509_31638, RNA815_15022} |
| 4. | MligTC455_27092 | 670 | 13.96 | Mlig455_000378 | Neo: - Age: Up-Down-Down |
0.962 | - | - | - | 0.962 | - | - | Mlig455_000378 {REF} {Length: 2011} {RNA1509_2754} {RNA1310_36150} {RNA815_12527} | |
| 5. | MligTC455_47338 | 217 | 4.52 | Mlig455_012709 | Neo: - Age: - |
PPIL4 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_012709 {REF} {Length: 1969} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=128.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=54.6]} {Human: ENSG00000131013, PPIL4, peptidylprolyl isomerase like 4, [RH, Score=437, Expect=2e-148]} {Mouse: ENSMUSG00000015757, Ppil4, peptidylprolyl isomerase (cyclophilin)-like 4, [RH, Score=436, Expect=4e-148]} {Dmel: FBgn0027617, CG5808, [RH, Score=445, Expect=1e-149]} {Celegans: WBGene00000890, sig-7, Peptidyl-prolyl cis-trans isomerase sig-7, [RH, Score=430, Expect=7e-147]} {Smed: dd_Smed_v6_5960_0_1, dd_Smed_v6_5960_0_1, [RH, Score=475, Expect=6e-164]} {RNA1509_24280} {RNA1310_15714} {RNA815_14242} |
| 6. | MligTC455_33763 | 342 | 7.12 | Mlig455_017006 | Neo: Irradiation Age: - |
ZSCAN22 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_017006 {REF} {Length: 1666} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=171.0]; Zinc finger, C2H2 type [PF00096.28, score=113.3]; C2H2-type zinc finger [PF13894.8, score=88.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=57.3]; C2H2-type zinc finger [PF13912.8, score=55.1]; Zinc-finger of C2H2 type [PF12874.9, score=49.2]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=28.7]; BED zinc finger [PF02892.17, score=28.0]; zinc-finger C2H2-type [PF16622.7, score=27.0]; AN1-like Zinc finger [PF01428.18, score=26.4]; Family of unknown function (DUF5810) [PF19126.2, score=25.1]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=23.6]; C2H2-type zinc ribbon [PF15909.7, score=22.3]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=21.5]; LIM domain [PF00412.24, score=20.1]; KIAA1045 RING finger [PF16744.7, score=19.6]; Zinc ribbon domain [PF09723.12, score=19.5]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=19.3]; Zinc-finger domain [PF10276.11, score=18.7]} {Human: ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=223, Expect=8e-69]; ENSG00000166526, ZNF3, zinc finger protein 3, [Score=221, Expect=1e-68]; ENSG00000188283, ZNF383, zinc finger protein 383, [Score=219, Expect=1e-67]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=217, Expect=9e-65]; ENSG00000176293, ZNF135, zinc finger protein 135, [Score=215, Expect=5e-64]; ENSG00000198315, ZKSCAN8, zinc finger with KRAB and SCAN domains 8, [Score=215, Expect=6e-65]; ENSG00000171827, ZNF570, zinc finger protein 570, [Score=215, Expect=4e-65]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=215, Expect=1e-63]; ENSG00000251247, ZNF345, zinc finger protein 345, [Score=214, Expect=5e-67]; ENSG00000198939, ZFP2, ZFP2 zinc finger protein, [Score=213, Expect=4e-65]; ENSG00000198453, ZNF568, zinc finger protein 568, [Score=212, Expect=3e-63]; ENSG00000176371, ZSCAN2, zinc finger and SCAN domain containing 2, [Score=212, Expect=2e-63]} {Mouse: ENSMUSG00000037007, Zfp113, zinc finger protein 113, [Score=224, Expect=1e-69]; ENSMUSG00000054715, Zscan22, zinc finger and SCAN domain containing 22, [Score=222, Expect=3e-68]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=218, Expect=2e-65]; ENSMUSG00000099689, Zfp383, zinc finger protein 383, [Score=217, Expect=2e-66]; ENSMUSG00000058402, Zfp420, zinc finger protein 420, [Score=217, Expect=1e-65]; ENSMUSG00000087598, Zfp111, zinc finger protein 111, [Score=216, Expect=2e-64]; ENSMUSG00000049321, Zfp2, zinc finger protein 2, [Score=213, Expect=3e-65]} {Dmel: FBgn0032979, Clamp, Chromatin-linked adaptor for MSL proteins, [Score=170, Expect=3e-48]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=138, Expect=4e-38]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=147, Expect=2e-41]} {RNA1509_12248} {RNA1310_30428} {RNA815_13568} |
| 7. | MligTC455_36323 | 204 | 4.24 | Mlig455_013277 | Neo: - Age: logFC(26M/2M)=0.456 |
TMC5 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_013277 {REF} {Length: 3130} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=52.5]} {Human: ENSG00000103534, TMC5, transmembrane channel like 5, [Score=112, Expect=4e-25]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=96.7, Expect=3e-20]; ENSMUSG00000030650, Tmc5, transmembrane channel-like gene family 5, [Score=95.5, Expect=7e-20]} {RNA1509_58030} {RNA1310_8396} {RNA815_832.1} |
| 8. | MligTC455_35815 | 877 | 18.27 | Mlig455_035055, Mlig455_035076 | Neo: - Age: - |
LYST | 0.954 | - | - | - | - | - | 0.954 | Mlig455_035055 {REF} {Length: 9148} {Pfam: Beige/BEACH domain [PF02138.20, score=364.8]; PH domain associated with Beige/BEACH [PF14844.8, score=69.8]} {Human: ENSG00000143669, LYST, lysosomal trafficking regulator, [RH, Score=679, Expect=0.0]} {Mouse: ENSMUSG00000019726, Lyst, lysosomal trafficking regulator, [RH, Score=664, Expect=0.0]} {Dmel: FBgn0265988, mv, mauve, [RH, Score=454, Expect=9e-128]} {Celegans: WBGene00007752, wdfy-3, WD40 and FYVE domain protein, [Score=362, Expect=8e-100]} {Smed: dd_Smed_v6_7819_0_1, dd_Smed_v6_7819_0_1, [RH, Score=423, Expect=1e-123]} {RNA1509_27538, RNA1509_4907} {RNA1310_255.1, RNA1509_27538} {RNA1509_27538, RNA815_8084} Mlig455_035076 {REF} {Length: 12834} {TRANSSPLICED} {Pfam: Beige/BEACH domain [PF02138.20, score=365.6]; PH domain associated with Beige/BEACH [PF14844.8, score=71.5]} {Human: ENSG00000143669, LYST, lysosomal trafficking regulator, [RH, Score=688, Expect=0.0]} {Mouse: ENSMUSG00000019726, Lyst, lysosomal trafficking regulator, [RH, Score=672, Expect=0.0]} {Dmel: FBgn0265988, mv, mauve, [RH, Score=475, Expect=9e-134]} {Celegans: WBGene00007752, wdfy-3, WD40 and FYVE domain protein, [Score=365, Expect=1e-100]} {Smed: dd_Smed_v6_7819_0_1, dd_Smed_v6_7819_0_1, [RH, Score=422, Expect=4e-123]} {RNA1509_4907} {RNA1310_255.1, RNA1509_4907} {RNA1509_4907, RNA815_7875} |
| 9. | MligTC455_25893 | 1723 | 35.89 | Mlig455_012195 | Neo: - Age: Down-Up-Down Regeneration-downregulated BL: -1.958 Regeneration-depleted BL: -1.958 |
SERINC1 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_012195 {REF} {Length: 2613} {TRANSSPLICED} {tRNA: Glu(CTC),pseudo, score=25.1} {Pfam: Serine incorporator (Serinc) [PF03348.17, score=491.7]} {Human: ENSG00000111897, SERINC1, serine incorporator 1, [RH, Score=377, Expect=8e-127]} {Mouse: ENSMUSG00000019877, Serinc1, serine incorporator 1, [RH, Score=397, Expect=5e-135]} {Dmel: FBgn0028399, TMS1, [Score=332, Expect=2e-109]} {Celegans: WBGene00021956, Y57E12AL.1, [RH, Score=358, Expect=1e-119]} {Smed: dd_Smed_v6_1130_0_1, dd_Smed_v6_1130_0_1, [RH, Score=490, Expect=2e-171]} {RNA1509_6329, RNA1509_8130} {RNA1310_16171, RNA1509_8130} {RNA1509_8130, RNA815_6171} |
| 10. | MligTC455_39596 | 223 | 4.65 | Mlig455_017478 | Neo: - Age: Down-Up-Down |
0.952 | - | - | - | - | - | 0.952 | Mlig455_017478 {REF} {Length: 1165} {Pfam: PX domain [PF00787.26, score=32.8]} {RNA1509_47805} {RNA1310_14342} {RNA815_17060} | |
| 11. | MligTC455_37322 | 147 | 3.06 | Mlig455_022890 | Neo: - Age: Down-Up-Down |
SLC22A18 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_022890 {REF} {Length: 2172} {Pfam: Major Facilitator Superfamily [PF07690.18, score=39.3]} {Human: ENSG00000110628, SLC22A18, solute carrier family 22 member 18, [RH, Score=83.6, Expect=2e-18]; ENSG00000276130, SLC22A18, solute carrier family 22 member 18, [RH, Score=83.6, Expect=2e-18]} {Mouse: ENSMUSG00000000154, Slc22a18, solute carrier family 22 (organic cation transporter), member 18, [Score=90.5, Expect=1e-20]} {RNA1509_11252} {RNA1310_18158} {RNA815_723} |
| 12. | MligTC455_42404 | 1993 | 41.52 | Mlig455_043988, Mlig455_050697 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.455/0.00555 |
USP2 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_043988 {REF} {Length: 2879} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=245.9]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=56.3]} {Human: ENSG00000036672, USP2, ubiquitin specific peptidase 2, [RH, Score=288, Expect=4e-90]} {Mouse: ENSMUSG00000032010, Usp2, ubiquitin specific peptidase 2, [RH, Score=288, Expect=3e-90]} {Dmel: FBgn0031187, Usp2, Ubiquitin specific protease 2, [RH, Score=294, Expect=6e-90]} {Celegans: WBGene00013506, usp-3, Ubiquitinyl hydrolase 1, [RH, Score=167, Expect=6e-46]} {Smed: dd_Smed_v6_7150_0_1, dd_Smed_v6_7150_0_1, [RH, Score=330, Expect=5e-107]} {RNA1509_5139} {RNA1310_18344} {RNA815_13152} Mlig455_050697 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=245.1]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=56.8]} {Human: ENSG00000036672, USP2, ubiquitin specific peptidase 2, [RH, Score=286, Expect=1e-89]} {Mouse: ENSMUSG00000032010, Usp2, ubiquitin specific peptidase 2, [RH, Score=288, Expect=4e-90]} {Dmel: FBgn0031187, Usp2, Ubiquitin specific protease 2, [RH, Score=292, Expect=4e-89]} {Celegans: WBGene00013506, usp-3, Ubiquitinyl hydrolase 1, [RH, Score=165, Expect=8e-45]} {Smed: dd_Smed_v6_7150_0_1, dd_Smed_v6_7150_0_1, [RH, Score=334, Expect=2e-108]} {RNA1509_5139} {RNA1310_18344} {RNA815_13152} |