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Results for MligTC455_35927

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_35927 31 0.64 Mlig455_067147

Neo: -

Age: -

 Mlig455_067147 {REF} {Length: 1423} {Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [Score=52.4, Expect=6e-07]} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=128, Expect=1e-33]} {RNA1509_10020} {RNA1310_2173} {RNA815_10231}

Cumulative graph for MligTC455_35927

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.242 1.122 0.99961 1.00000
RegionR2 0.492 1.122 0.61286 0.95990
RegionR3 -0.813 1.122 0.96770 1.00000
RegionR4 1.704 1.122 0.26474 0.56900
RegionR5 -0.004 1.122 0.80331 1.00000
RegionR6 0.426 1.122 0.57931 1.00000
RegionR7 -1.407 1.122 0.99972 1.00000
RegionR8 -0.155 1.122 0.99968 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.689 1.122 0.74420 1.00000
RegenerationR2 -0.641 1.122 0.56111 0.89908
RegenerationR3 2.306 1.122 0.17423 0.61054
RegenerationR4 0.863 1.122 0.51092 0.87473
RegenerationR5 2.654 1.122 0.04812 0.35469
RegenerationR6 0.964 1.122 0.54490 0.83601
RegenerationBL 1.355 1.122 0.48507 0.85042
RegenerationTP 1.162 1.122 0.58962 0.95485


Genes with expression patterns similar to MligTC455_35927

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_35927 31 0.64 Mlig455_067147

Neo: -

Age: -

 3 - - 1.000 - 1.000 1.000 Mlig455_067147 {REF} {Length: 1423} {Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [Score=52.4, Expect=6e-07]} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=128, Expect=1e-33]} {RNA1509_10020} {RNA1310_2173} {RNA815_10231}
2. MligTC455_35930 426 8.87 Mlig455_013588, Mlig455_020368, Mlig455_020427, Mlig455_030258, Mlig455_032612, Mlig455_035614, Mlig455_051237, Mlig455_052667, Mlig455_070378

Neo: -

Age: Up-Down-Up

Region-enriched R4: 2.638/0.03574

 NYNRIN, RTL1 2.96 - - 0.987 - 0.982 0.991

Mlig455_013588 {REF} {Length: 1060} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.2]; Spumavirus aspartic protease (A9) [PF03539.16, score=21.2]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=181, Expect=2e-52]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_20962}

Mlig455_020368 {REF} {Length: 5223} {Pfam: Zinc knuckle [PF00098.25, score=23.7]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_10231}

Mlig455_020427 {REF} {Length: 5234} {Pfam: Retrotransposon gag protein [PF03732.19, score=30.7]; Zinc knuckle [PF00098.25, score=21.4]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_10231}

Mlig455_030258 {REF} {Length: 3077} {Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [Score=51.6, Expect=1e-06]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=99.4, Expect=4e-23]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_10231}

Mlig455_032612 {REF} {Length: 5598} {Pfam: Retrotransposon gag protein [PF03732.19, score=30.6]; Zinc knuckle [PF00098.25, score=22.5]} {RNA1509_10020} {RNA1310_1554.1, RNA1509_10020} {RNA1509_10020, RNA815_10231}

Mlig455_035614 {REF} {Length: 5367} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=69.5]; Integrase zinc binding domain [PF17921.3, score=61.5]; Integrase core domain [PF00665.28, score=51.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=8e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=75.9, Expect=1e-13]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [RH, Score=219, Expect=2e-64]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_10231}

Mlig455_051237 {REF} {Length: 4995} {Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [Score=50.8, Expect=2e-06]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=103, Expect=2e-24]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_10231}

Mlig455_052667 {REF} {Length: 5183} {Pfam: Retrotransposon gag protein [PF03732.19, score=30.6]; Zinc knuckle [PF00098.25, score=22.5]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_15136}

Mlig455_070378 {REF} {Length: 5332} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=98.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=98.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=96.4]; Integrase zinc binding domain [PF17921.3, score=62.8]; Integrase core domain [PF00665.28, score=51.7]; Spumavirus aspartic protease (A9) [PF03539.16, score=19.2]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=113, Expect=1e-24]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=94.4, Expect=6e-19]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=94.4, Expect=6e-19]} {Dmel: FBgn0029807, CG3108, [Score=61.2, Expect=5e-09]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=443, Expect=5e-138]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_10231}
3. MligTC455_35926 40 0.84 Mlig455_030259

Neo: -

Age: -

 2.65 - - 0.978 - 0.754 0.918 Mlig455_030259 {REF} {Length: 2193} {NoTransDecoderORF} {RNA1509_10020} {RNA1310_98329} {RNA815_57545}
4. MligTC455_03703 4461 92.93 Mlig455_031193

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.688

Region-enriched R3: 1.758/0.00057

 0.962 - - - - 0.962 - Mlig455_031193 {REF} {Length: 1805} {RNA1509_14496, RNA1509_17573, RNA1509_2201, RNA1509_23018, RNA1509_27144, RNA1509_28330, RNA1509_40135, RNA1509_5877} {RNA1310_18653, RNA1509_14496, RNA1509_17573, RNA1509_2201, RNA1509_23018, RNA1509_27144, RNA1509_28330, RNA1509_40135, RNA1509_5877} {RNA1509_14496, RNA1509_17573, RNA1509_2201, RNA1509_23018, RNA1509_27144, RNA1509_28330, RNA1509_40135, RNA1509_5877, RNA815_9203.1}

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