Data search
Results for MligTC455_35964
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35964 | 5531 | 115.22 | Mlig455_024252 | Neo: - Age: - Region-enriched R6: 1.236/0.00518 Regeneration-depleted BL: -2.431 |
Mlig455_024252 {REF} {Length: 1552} {Pfam: Neuropeptide S precursor protein [PF14993.8, score=24.1]} {RNA1509_6325} {RNA1310_75089.1, RNA1509_6325} {RNA1509_6325, RNA815_21832.1} |
Cumulative graph for MligTC455_35964
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.202 | 6.935 | 0.03204 | 0.45412 | |
| RegionR2 | 1.199 | 6.935 | 0.00065 | 0.01624 | |
| RegionR3 | 0.306 | 6.935 | 0.34233 | 0.87835 | |
| RegionR4 | -1.509 | 6.935 | 0.00020 | 0.00289 | |
| RegionR5 | -1.594 | 6.935 | 0.00001 | 0.00030 | |
| RegionR6 | 1.236 | 6.935 | 0.00006 | 0.00518 | |
| RegionR7 | 0.892 | 6.935 | 0.00492 | 0.10921 | |
| RegionR8 | 0.671 | 6.935 | 0.05051 | 0.44037 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.529 | 6.935 | 0.48342 | 1.00000 | |
| RegenerationR2 | -0.831 | 6.935 | 0.04246 | 0.34002 | |
| RegenerationR3 | -0.997 | 6.935 | 0.01697 | 0.23805 | |
| RegenerationR4 | -0.464 | 6.935 | 0.29021 | 0.73432 | |
| RegenerationR5 | -0.436 | 6.935 | 0.31294 | 0.73817 | |
| RegenerationR6 | -1.681 | 6.935 | 0.00009 | 0.00823 | |
| RegenerationBL | -2.431 | 6.935 | 0.00000 | 0.00001 | |
| RegenerationTP | -0.433 | 6.935 | 0.27702 | 0.72526 |
Genes with expression patterns similar to MligTC455_35964
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35964 | 5531 | 115.22 | Mlig455_024252 | Neo: - Age: - Region-enriched R6: 1.236/0.00518 Regeneration-depleted BL: -2.431 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024252 {REF} {Length: 1552} {Pfam: Neuropeptide S precursor protein [PF14993.8, score=24.1]} {RNA1509_6325} {RNA1310_75089.1, RNA1509_6325} {RNA1509_6325, RNA815_21832.1} | |
| 2. | MligTC455_35965 | 4891 | 101.89 | Mlig455_055810 | Neo: - Age: logFC(26M/2M)=-0.211 Region-enriched R2: 1.162/0.02088 Regeneration-depleted BL: -2.507 |
5.743 | 0.845 | 0.983 | 0.978 | 0.975 | 0.984 | 0.978 | Mlig455_055810 {REF} {Length: 1255} {Pfam: Neuropeptide S precursor protein [PF14993.8, score=36.9]} {RNA1509_29793} {RNA1310_75089.2} {RNA815_21832.1} | |
| 3. | MligTC455_24762 | 9096 | 189.51 | Mlig455_051668 | Neo: - Age: - Region-enriched R8: 2.093/0.00000 Regeneration-depleted BL: -1.998 |
4.875 | 0.791 | 0.773 | 0.788 | 0.771 | 0.974 | 0.778 | Mlig455_051668 {REF} {Length: 931} {TRANSSPLICED} {RNA1509_50169} {RNA1310_42658} {RNA815_17706} | |
| 4. | MligTC455_50861 | 422 | 8.78 | Mlig455_050457 | Neo: - Age: Down-Up-Down Region-enriched R2: 2.760/0.00000 |
CPLX2 | 3.351 | - | 0.722 | - | 0.955 | 0.847 | 0.827 | Mlig455_050457 {REF} {Length: 2902} {Pfam: Synaphin protein [PF05835.14, score=85.3]} {Human: ENSG00000145920, CPLX2, complexin 2, [RH, Score=55.1, Expect=1e-10]} {Mouse: ENSMUSG00000025867, Cplx2, complexin 2, [RH, Score=50.8, Expect=1e-08]} {Dmel: FBgn0041605, cpx, complexin, [Score=64.3, Expect=7e-14]} {Celegans: WBGene00022271, cpx-1, Putative complexin-1, [Score=71.2, Expect=1e-16]} {Smed: dd_Smed_v6_9918_0_1, dd_Smed_v6_9918_0_1, [Score=78.6, Expect=1e-19]} {RNA1509_56433} {RNA1310_16525, RNA1509_56433} {RNA1509_56433, RNA815_8066.1} |
| 5. | MligTC455_19329 | 90 | 1.88 | Mlig455_068578 | Neo: - Age: - Region-enriched R2: 3.988/0.02701 |
CHAT | 2.687 | - | - | - | 0.955 | 0.890 | 0.842 | Mlig455_068578 {REF} {Length: 3661} {TRANSSPLICED} {Pfam: Choline/Carnitine o-acyltransferase [PF00755.22, score=556.7]} {Human: ENSG00000070748, CHAT, choline O-acetyltransferase, [RH, Score=519, Expect=2e-177]} {Mouse: ENSMUSG00000021919, Chat, choline acetyltransferase, [RH, Score=520, Expect=7e-178]} {Dmel: FBgn0000303, ChAT, Choline acetyltransferase, [RH, Score=488, Expect=1e-164]} {Celegans: WBGene00000481, cha-1, Choline O-acetyltransferase, [RH, Score=363, Expect=2e-117]} {Smed: dd_Smed_v6_6208_0_1, dd_Smed_v6_6208_0_1, [RH, Score=601, Expect=0.0]} {RNA1509_36058} {RNA1310_3092, RNA1509_36058} {RNA1509_36058, RNA815_2435.1} |
| 6. | MligTC455_49593 | 323 | 6.72 | Mlig455_025219 | Neo: - Age: Up-Down-Up Region-enriched R2: 3.432/0.00265 |
RRBP1 | 2.51 | - | 0.795 | - | 0.960 | 0.755 | - | Mlig455_025219 {REF} {Length: 1413} {Human: ENSG00000125844, RRBP1, ribosome binding protein 1, [RH, Score=62.8, Expect=2e-11]} {RNA1509_39523} {RNA1310_52655} {RNA815_22785} |
| 7. | MligTC455_49337 | 141 | 2.94 | Mlig455_004942 | Neo: - Age: - Region-enriched R2: 4.260/0.00004 |
CA7 | 1.811 | - | - | - | 0.951 | 0.860 | - | Mlig455_004942 {REF} {Length: 2623} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.23, score=206.7]} {Human: ENSG00000168748, CA7, carbonic anhydrase 7, [Score=157, Expect=2e-45]} {Mouse: ENSMUSG00000031883, Car7, carbonic anhydrase 7, [Score=156, Expect=2e-45]} {Dmel: FBgn0027844, CAH1, Carbonic anhydrase 1, [Score=129, Expect=8e-35]} {Celegans: WBGene00000283, cah-5, Putative carbonic anhydrase 5, [Score=89.4, Expect=4e-20]} {Smed: dd_Smed_v6_11683_0_1, dd_Smed_v6_11683_0_1, [Score=160, Expect=1e-46]} {RNA1509_43765} {RNA1310_22186} {RNA815_18428} |
| 8. | MligTC455_42973 | 126 | 2.63 | Mlig455_049802 | Neo: - Age: - Region-enriched R8: 3.350/0.01883 |
PRR9 | 1.765 | - | - | - | 0.957 | 0.808 | - | Mlig455_049802 {REF} {Length: 4186} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=48.1, Expect=2e-06]} {RNA1310_38620} {RNA815_23864} |
| 9. | MligTC455_47095 | 264 | 5.49 | Mlig455_034015 | Neo: - Age: logFC(26M/2M)=0.440 Region-enriched R2: 3.525/0.00629 Regeneration-upregulated R5: 2.857 Regeneration-enriched R5: 2.857 |
SSUH2 | 1.733 | - | - | 0.765 | 0.968 | - | - | Mlig455_034015 {REF} {Length: 2246} {Pfam: DnaJ central domain [PF00684.21, score=23.4]} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=110, Expect=9e-27]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=87.4, Expect=9e-19]} {RNA1509_22065} {RNA1310_14684, RNA1509_22065} {RNA1509_22065, RNA815_5263.1} |
| 10. | MligTC455_08333 | 172 | 3.59 | Mlig455_025435, Mlig455_025445 | Neo: - Age: - |
TNS1 | 1.7 | - | - | - | 0.950 | 0.750 | - | Mlig455_025435 {REF} {Length: 4797} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=67.1]; C2 domain of PTEN tumour-suppressor protein [PF10409.11, score=38.4]; SH2 domain [PF00017.26, score=36.5]} {Human: ENSG00000079308, TNS1, tensin 1, [RH, Score=257, Expect=2e-69]; ENSG00000136205, TNS3, tensin 3, [RH, Score=251, Expect=1e-67]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [RH, Score=256, Expect=1e-72]; ENSMUSG00000020422, Tns3, tensin 3, [RH, Score=251, Expect=1e-67]} {Dmel: FBgn0000244, by, blistery, [RH, Score=222, Expect=2e-60]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=243, Expect=6e-72]} {Smed: dd_Smed_v6_4454_0_2, dd_Smed_v6_4454_0_2, [Score=217, Expect=5e-59]} {RNA1509_43365} {RNA1310_7714, RNA1509_43365} {RNA1509_43365, RNA815_14514} Mlig455_025445 {REF} {Length: 1758} {Pfam: C2 domain of PTEN tumour-suppressor protein [PF10409.11, score=37.0]} {Human: ENSG00000079308, TNS1, tensin 1, [RH, Score=191, Expect=2e-53]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [Score=191, Expect=3e-51]; ENSMUSG00000037003, Tns2, tensin 2, [Score=187, Expect=4e-50]} {Dmel: FBgn0026379, Pten, Phosphatase and tensin homolog, [Score=67.8, Expect=1e-11]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=109, Expect=1e-24]} {RNA1509_44169} {RNA1310_10509} {RNA815_24170} |
| 11. | MligTC455_39396 | 469 | 9.77 | Mlig455_031203 | Neo: - Age: - Region-enriched R8: 3.069/0.00001 |
ARRDC3 | 1.688 | - | 0.730 | - | 0.958 | - | - | Mlig455_031203 {REF} {Length: 1835} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=114.8]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=66.5]; Rgp1 [PF08737.12, score=23.6]} {Human: ENSG00000113369, ARRDC3, arrestin domain containing 3, [Score=112, Expect=5e-27]} {Mouse: ENSMUSG00000074794, Arrdc3, arrestin domain containing 3, [Score=113, Expect=1e-27]} {Dmel: FBgn0037517, CG10086, [RH, Score=85.1, Expect=1e-17]} {Celegans: WBGene00009579, arrd-6, ARRestin Domain protein, [RH, Score=322, Expect=2e-106]} {RNA1509_30037} {RNA1310_19411, RNA1509_30037} {RNA1509_30037, RNA815_7851} |
| 12. | MligTC455_37269 | 173 | 3.61 | Mlig455_020047 | Neo: - Age: - |
CASP3 | 1.662 | - | - | - | 0.957 | - | 0.705 | Mlig455_020047 {REF} {Length: 2828} {Pfam: Caspase domain [PF00656.24, score=94.7]; Ankyrin repeats (3 copies) [PF12796.9, score=79.1]; Ankyrin repeats (many copies) [PF13857.8, score=62.0]; Ankyrin repeats (many copies) [PF13637.8, score=58.0]; Ankyrin repeat [PF13606.8, score=40.7]; Ankyrin repeat [PF00023.32, score=31.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=111, Expect=1e-26]; ENSG00000003400, CASP10, caspase 10, [Score=107, Expect=9e-24]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=106, Expect=5e-25]; ENSMUSG00000025076, Casp7, caspase 7, [Score=106, Expect=7e-25]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=96.3, Expect=2e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=81.6, Expect=9e-17]} {Smed: dd_Smed_v6_10883_0_1, dd_Smed_v6_10883_0_1, [Score=107, Expect=1e-24]} {RNA1509_54818} {RNA1310_7187} {RNA815_8712} |
| 13. | MligTC455_47525 | 119 | 2.49 | Mlig455_030977 | Neo: - Age: Down-Up-Up Region-enriched R2: 3.232/0.02097 |
CALM2 | 1.661 | - | - | - | 0.950 | 0.711 | - | Mlig455_030977 {REF} {Length: 1161} {Pfam: EF hand [PF00036.34, score=76.5]; EF-hand domain pair [PF13499.8, score=73.7]; EF-hand domain [PF13405.8, score=66.7]; EF-hand domain [PF14658.8, score=42.2]; EF hand [PF13202.8, score=35.1]; EF-hand domain pair [PF13833.8, score=33.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=151, Expect=4e-47]; ENSG00000198668, CALM1, calmodulin 1, [Score=151, Expect=4e-47]; ENSG00000160014, CALM3, calmodulin 3, [Score=151, Expect=4e-47]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=151, Expect=3e-47]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=151, Expect=3e-47]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=151, Expect=3e-47]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=152, Expect=8e-48]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=151, Expect=1e-47]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=151, Expect=1e-47]} {RNA1310_31633} {RNA815_34040} |
| 14. | MligTC455_42454 | 1804 | 37.58 | Mlig455_044488 | Neo: - Age: - Region-enriched R7: 3.309/0.00000 Regeneration-downregulated BL: -5.601 Regeneration-depleted BL: -5.601 |
0.964 | - | - | - | 0.964 | - | - | Mlig455_044488 {REF} {Length: 3520} {Pfam: Domain of unknown function (DUF4735) [PF15882.7, score=197.2]} {Smed: dd_Smed_v6_21285_0_1, dd_Smed_v6_21285_0_1, [RH, Score=209, Expect=9e-65]} {RNA1509_24134} {RNA1310_20974} {RNA815_11272} | |
| 15. | MligTC455_20868 | 104 | 2.18 | Mlig455_047211 | Neo: - Age: Down-Up-Down |
SARAF | 0.95 | - | - | - | 0.950 | - | - | Mlig455_047211 {REF} {Length: 3599} {Pfam: SOCE-associated regulatory factor of calcium homoeostasis [PF06682.14, score=200.7]} {Human: ENSG00000133872, SARAF, store-operated calcium entry associated regulatory factor, [Score=137, Expect=1e-37]} {Mouse: ENSMUSG00000031532, Saraf, store-operated calcium entry-associated regulatory factor, [Score=126, Expect=1e-33]} {Celegans: WBGene00011529, T06D8.9, [Score=123, Expect=4e-33]} {Smed: dd_Smed_v6_809_0_1, dd_Smed_v6_809_0_1, [Score=157, Expect=3e-46]} {RNA1509_37606} {RNA1310_29107, RNA1509_37606} {RNA1509_37606, RNA815_13291} |
Berezikov Lab - 2020-2021 © ERIBA