M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_35965

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_35965 4891 101.89 Mlig455_055810

Neo: -

Age: logFC(26M/2M)=-0.211

Region-enriched R2: 1.162/0.02088
Region-enriched R6: 1.112/0.01713

Regeneration-depleted BL: -2.507
Regeneration-depleted R6: -1.719

 Mlig455_055810 {REF} {Length: 1255} {Pfam: Neuropeptide S precursor protein [PF14993.8, score=36.9]} {RNA1509_29793} {RNA1310_75089.2} {RNA815_21832.1}

Cumulative graph for MligTC455_35965

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.929 6.749 0.09420 0.65646
RegionR2 1.162 6.749 0.00094 0.02088
RegionR3 0.159 6.749 0.62104 1.00000
RegionR4 -1.327 6.749 0.00096 0.01012
RegionR5 -1.52 6.749 0.00003 0.00053
RegionR6 1.112 6.749 0.00030 0.01713
RegionR7 0.868 6.749 0.00626 0.12777
RegionR8 0.476 6.749 0.17864 0.76026

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.474 6.749 0.51909 1.00000
RegenerationR2 -0.91 6.749 0.02568 0.26437
RegenerationR3 -1.066 6.749 0.01083 0.19007
RegenerationR4 -0.775 6.749 0.07737 0.44228
RegenerationR5 -0.662 6.749 0.12751 0.53166
RegenerationR6 -1.719 6.749 0.00005 0.00597
RegenerationBL -2.507 6.749 0.00000 0.00000
RegenerationTP -0.568 6.749 0.15712 0.58502


Genes with expression patterns similar to MligTC455_35965

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_35965 4891 101.89 Mlig455_055810

Neo: -

Age: logFC(26M/2M)=-0.211

Region-enriched R2: 1.162/0.02088
Region-enriched R6: 1.112/0.01713

Regeneration-depleted BL: -2.507
Regeneration-depleted R6: -1.719

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_055810 {REF} {Length: 1255} {Pfam: Neuropeptide S precursor protein [PF14993.8, score=36.9]} {RNA1509_29793} {RNA1310_75089.2} {RNA815_21832.1}
2. MligTC455_35964 5531 115.22 Mlig455_024252

Neo: -

Age: -

Region-enriched R6: 1.236/0.00518
Region-enriched R2: 1.199/0.01624

Regeneration-depleted BL: -2.431
Regeneration-depleted R6: -1.681

 5.743 0.845 0.983 0.978 0.975 0.984 0.978 Mlig455_024252 {REF} {Length: 1552} {Pfam: Neuropeptide S precursor protein [PF14993.8, score=24.1]} {RNA1509_6325} {RNA1310_75089.1, RNA1509_6325} {RNA1509_6325, RNA815_21832.1}
3. MligTC455_24762 9096 189.51 Mlig455_051668

Neo: -

Age: -

Region-enriched R8: 2.093/0.00000
Region-enriched R7: 1.886/0.00000
Region-enriched R2: 1.134/0.00619

Regeneration-depleted BL: -1.998
Regeneration-depleted R6: -1.772

 4.713 0.714 0.791 0.762 0.724 0.961 0.761 Mlig455_051668 {REF} {Length: 931} {TRANSSPLICED} {RNA1509_50169} {RNA1310_42658} {RNA815_17706}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA