Data search
Results for MligTC455_35967
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35967 | 634 | 13.22 | Mlig455_038049 | Neo: - Age: - Region-enriched R5: 1.197/0.00174 |
ABL1 | Mlig455_038049 {REF} {Length: 6083} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=312.6]; Protein kinase domain [PF00069.27, score=154.8]; SH2 domain [PF00017.26, score=70.5]; Variant SH3 domain [PF14604.8, score=35.2]; SH3 domain [PF00018.30, score=32.7]; Phosphotransferase enzyme family [PF01636.25, score=21.0]} {Human: ENSG00000097007, ABL1, ABL proto-oncogene 1, non-receptor tyrosine kinase, [RH, Score=535, Expect=1e-170]; ENSG00000143322, ABL2, ABL proto-oncogene 2, non-receptor tyrosine kinase, [RH, Score=522, Expect=1e-166]} {Mouse: ENSMUSG00000026842, Abl1, c-abl oncogene 1, non-receptor tyrosine kinase, [RH, Score=533, Expect=1e-170]; ENSMUSG00000026596, Abl2, v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene), [RH, Score=521, Expect=2e-166]} {Dmel: FBgn0000017, Abl, Abl tyrosine kinase, [RH, Score=535, Expect=7e-167]} {Celegans: WBGene00000018, abl-1, Tyrosine-protein kinase abl-1, [RH, Score=503, Expect=2e-158]} {Smed: dd_Smed_v6_4352_0_1, dd_Smed_v6_4352_0_1, [RH, Score=536, Expect=8e-175]} {RNA1509_14302, RNA1509_45756} {RNA1310_8904, RNA1509_45756} {RNA1509_45756, RNA815_5007} |
Cumulative graph for MligTC455_35967
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.388 | 4.058 | 0.28619 | 0.93752 | |
| RegionR2 | -0.264 | 4.058 | 0.56465 | 0.92607 | |
| RegionR3 | -0.109 | 4.058 | 0.78425 | 1.00000 | |
| RegionR4 | 0.398 | 4.058 | 0.36139 | 0.68444 | |
| RegionR5 | 1.197 | 4.058 | 0.00011 | 0.00174 | |
| RegionR6 | 0.735 | 4.058 | 0.03966 | 0.37372 | |
| RegionR7 | 0.47 | 4.058 | 0.32341 | 0.95817 | |
| RegionR8 | -1.038 | 4.058 | 0.19307 | 0.78667 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.246 | 4.058 | 0.21057 | 0.95042 | |
| RegenerationR2 | -0.219 | 4.058 | 0.49092 | 0.86807 | |
| RegenerationR3 | -0.066 | 4.058 | 0.85639 | 1.00000 | |
| RegenerationR4 | -0.439 | 4.058 | 0.23890 | 0.68817 | |
| RegenerationR5 | -0.443 | 4.058 | 0.13311 | 0.54112 | |
| RegenerationR6 | -0.436 | 4.058 | 0.20409 | 0.54610 | |
| RegenerationBL | -0.314 | 4.058 | 0.54726 | 0.90415 | |
| RegenerationTP | 0.366 | 4.058 | 0.52103 | 0.91480 |
Genes with expression patterns similar to MligTC455_35967
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35967 | 634 | 13.22 | Mlig455_038049 | Neo: - Age: - Region-enriched R5: 1.197/0.00174 |
ABL1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_038049 {REF} {Length: 6083} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=312.6]; Protein kinase domain [PF00069.27, score=154.8]; SH2 domain [PF00017.26, score=70.5]; Variant SH3 domain [PF14604.8, score=35.2]; SH3 domain [PF00018.30, score=32.7]; Phosphotransferase enzyme family [PF01636.25, score=21.0]} {Human: ENSG00000097007, ABL1, ABL proto-oncogene 1, non-receptor tyrosine kinase, [RH, Score=535, Expect=1e-170]; ENSG00000143322, ABL2, ABL proto-oncogene 2, non-receptor tyrosine kinase, [RH, Score=522, Expect=1e-166]} {Mouse: ENSMUSG00000026842, Abl1, c-abl oncogene 1, non-receptor tyrosine kinase, [RH, Score=533, Expect=1e-170]; ENSMUSG00000026596, Abl2, v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene), [RH, Score=521, Expect=2e-166]} {Dmel: FBgn0000017, Abl, Abl tyrosine kinase, [RH, Score=535, Expect=7e-167]} {Celegans: WBGene00000018, abl-1, Tyrosine-protein kinase abl-1, [RH, Score=503, Expect=2e-158]} {Smed: dd_Smed_v6_4352_0_1, dd_Smed_v6_4352_0_1, [RH, Score=536, Expect=8e-175]} {RNA1509_14302, RNA1509_45756} {RNA1310_8904, RNA1509_45756} {RNA1509_45756, RNA815_5007} |
| 2. | MligTC455_05071 | 450 | 9.38 | Mlig455_056329 | Neo: - Age: - |
PPFIA1 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_056329 {REF} {Length: 4814} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=83.1]; SAM domain (Sterile alpha motif) [PF07647.19, score=67.4]} {Human: ENSG00000131626, PPFIA1, PTPRF interacting protein alpha 1, [Score=573, Expect=0.0]; ENSG00000177380, PPFIA3, PTPRF interacting protein alpha 3, [Score=566, Expect=0.0]} {Mouse: ENSMUSG00000037519, Ppfia1, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1, [Score=580, Expect=0.0]; ENSMUSG00000026458, Ppfia4, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4, [Score=551, Expect=3e-177]} {Dmel: FBgn0046704, Liprin-alpha, [Score=360, Expect=4e-106]} {Celegans: WBGene00006364, syd-2, Liprin-alpha, [Score=262, Expect=3e-72]} {Smed: dd_Smed_v6_5468_0_2, dd_Smed_v6_5468_0_2, [Score=297, Expect=2e-83]} {RNA1509_10155, RNA1509_33703, RNA1509_46085, RNA1509_59323, RNA1509_60126} {RNA1310_3137.1, RNA1509_10155, RNA1509_33703, RNA1509_46085, RNA1509_59323, RNA1509_60126} {RNA1509_10155, RNA1509_33703, RNA1509_46085, RNA1509_59323, RNA1509_60126, RNA815_385} |
| 3. | MligTC455_39334 | 1606 | 33.46 | Mlig455_052203 | Neo: - Age: - Region-enriched R5: 1.064/0.00073 |
RAP1B | 0.953 | - | - | - | 0.953 | - | - | Mlig455_052203 {REF} {Length: 1239} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=196.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=75.0]; ADP-ribosylation factor family [PF00025.23, score=37.2]; RsgA GTPase [PF03193.18, score=25.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.1]; 50S ribosome-binding GTPase [PF01926.25, score=20.0]} {Human: ENSG00000127314, RAP1B, RAP1B, member of RAS oncogene family, [RH, Score=306, Expect=2e-107]; ENSG00000116473, RAP1A, RAP1A, member of RAS oncogene family, [RH, Score=300, Expect=7e-105]} {Mouse: ENSMUSG00000052681, Rap1b, RAS related protein 1b, [RH, Score=306, Expect=2e-107]; ENSMUSG00000068798, Rap1a, RAS-related protein 1a, [RH, Score=300, Expect=5e-105]} {Dmel: FBgn0004636, Rap1, Rap1 GTPase, [RH, Score=293, Expect=3e-102]} {Celegans: WBGene00004307, rap-1, Ras-related protein Rap-1, [RH, Score=295, Expect=2e-103]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [RH, Score=302, Expect=3e-106]} {RNA1509_14132, RNA1509_24825} {RNA1310_27332, RNA1509_14132, RNA1509_24825} {RNA1509_14132, RNA1509_24825, RNA815_12569} |
| 4. | MligTC455_48833 | 702 | 14.62 | Mlig455_006923, Mlig455_017937 | Neo: - Age: - Region-enriched R5: 1.677/0.02053 |
RNF2 | 0.953 | 0.953 | - | - | - | - | - | Mlig455_006923 {REF} {Length: 2956} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=53.5]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=22.4]; zinc-RING finger domain [PF14634.8, score=20.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=19.4]} {Human: ENSG00000121481, RNF2, ring finger protein 2, [RH, Score=252, Expect=1e-80]} {Mouse: ENSMUSG00000026484, Rnf2, ring finger protein 2, [RH, Score=252, Expect=9e-81]; ENSMUSG00000024325, Ring1, ring finger protein 1, [RH, Score=242, Expect=6e-76]} {Dmel: FBgn0003330, Sce, Sex combs extra, [RH, Score=226, Expect=9e-70]} {Celegans: WBGene00020496, spat-3, Suppressor of PAr-Two defect, [RH, Score=82.8, Expect=9e-17]} {Smed: dd_Smed_v6_8989_0_1, dd_Smed_v6_8989_0_1, [RH, Score=191, Expect=2e-56]} {RNA1509_26957} {RNA1310_17990, RNA1509_26957} {RNA1509_26957, RNA815_16348} Mlig455_017937 {REF} {Length: 2921} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=53.5]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=22.4]; zinc-RING finger domain [PF14634.8, score=20.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=19.4]} {Human: ENSG00000121481, RNF2, ring finger protein 2, [RH, Score=252, Expect=1e-80]} {Mouse: ENSMUSG00000026484, Rnf2, ring finger protein 2, [RH, Score=252, Expect=9e-81]; ENSMUSG00000024325, Ring1, ring finger protein 1, [RH, Score=242, Expect=6e-76]} {Dmel: FBgn0003330, Sce, Sex combs extra, [RH, Score=226, Expect=9e-70]} {Celegans: WBGene00020496, spat-3, Suppressor of PAr-Two defect, [RH, Score=82.8, Expect=9e-17]} {Smed: dd_Smed_v6_8989_0_1, dd_Smed_v6_8989_0_1, [RH, Score=191, Expect=2e-56]} {RNA1509_26957} {RNA1310_17990} {RNA815_16348} |
| 5. | MligTC455_36881 | 2253 | 46.95 | Mlig455_017274 | Neo: - Age: Up-Down-Down |
FLNA | 0.952 | - | - | - | - | 0.952 | - | Mlig455_017274 {REF} {Length: 10009} {Pfam: Filamin/ABP280 repeat [PF00630.21, score=990.1]; Calponin homology (CH) domain [PF00307.33, score=137.2]; Y_Y_Y domain [PF07495.15, score=55.8]; YtkA-like [PF13115.8, score=45.7]; Bacterial Ig-like domain (group 3) [PF16640.7, score=34.6]; CopC domain [PF04234.14, score=21.0]; CAMSAP CH domain [PF11971.10, score=18.3]} {Human: ENSG00000196924, FLNA, filamin A, [Score=1225, Expect=0.0]} {Mouse: ENSMUSG00000031328, Flna, filamin, alpha, [Score=1536, Expect=0.0]} {Dmel: FBgn0014141, cher, cheerio, [Score=1167, Expect=0.0]} {Celegans: WBGene00022048, fln-1, FiLamiN (Actin binding protein) homolog, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_810_0_1, dd_Smed_v6_810_0_1, [RH, Score=1346, Expect=0.0]} {RNA1509_1689} {RNA1310_3926} {RNA815_150} |
Berezikov Lab - 2020-2021 © ERIBA