TomoSeq data search

Data search

Results for MligTC455_36042

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36042

217

4.53

Mlig455_046386

Neo: -

Age: -

LOXHD1

Mlig455_046386 {REF} {Length: 3021} {TRANSSPLICED} {Pfam: PLAT/LH2 domain [PF01477.25, score=52.2]} {Human: ENSG00000167210, LOXHD1, lipoxygenase homology domains 1, [Score=75.9, Expect=2e-13]} {Mouse: ENSMUSG00000032818, Loxhd1, lipoxygenase homology domains 1, [Score=76.6, Expect=5e-14]} {Smed: dd_Smed_v6_39713_0_1, dd_Smed_v6_39713_0_1, [RH, Score=81.3, Expect=4e-16]} {RNA1509_25188} {RNA1310_11606} {RNA815_15282}

Cumulative graph for MligTC455_36042

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.272	2.738	0.24181	0.88859
RegionR2	0.33	2.738	0.70967	1.00000
RegionR3	0.694	2.738	0.43381	0.95211
RegionR4	2.243	2.738	0.01096	0.06541
RegionR5	0.329	2.738	0.69695	1.00000
RegionR6	0.268	2.738	0.73549	1.00000
RegionR7	0.625	2.738	0.55310	1.00000
RegionR8	0.782	2.738	0.51294	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.269	2.738	0.99952	1.00000
RegenerationR2	-0.15	2.738	0.72076	0.96301
RegenerationR3	-0.602	2.738	0.26876	0.70316
RegenerationR4	-0.763	2.738	0.20095	0.64696
RegenerationR5	-0.008	2.738	0.99179	1.00000
RegenerationR6	-1.506	2.738	0.03048	0.21800
RegenerationBL	0.335	2.738	0.62046	0.96297
RegenerationTP	-1.323	2.738	0.13590	0.55326

Genes with expression patterns similar to MligTC455_36042

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36042	217	4.53	Mlig455_046386	Neo: - Age: -	LOXHD1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_046386 {REF} {Length: 3021} {TRANSSPLICED} {Pfam: PLAT/LH2 domain [PF01477.25, score=52.2]} {Human: ENSG00000167210, LOXHD1, lipoxygenase homology domains 1, [Score=75.9, Expect=2e-13]} {Mouse: ENSMUSG00000032818, Loxhd1, lipoxygenase homology domains 1, [Score=76.6, Expect=5e-14]} {Smed: dd_Smed_v6_39713_0_1, dd_Smed_v6_39713_0_1, [RH, Score=81.3, Expect=4e-16]} {RNA1509_25188} {RNA1310_11606} {RNA815_15282}
2.	MligTC455_07850	131	2.73	Mlig455_040737	Neo: - Age: -		3.287	-	0.700	0.952	0.854	0.781	-	Mlig455_040737 {REF} {Length: 474} {NoTransDecoderORF} {RNA815_44906}
3.	MligTC455_22424	293	6.11	Mlig455_048176, Mlig455_048199	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.971		2.661	-	0.832	0.962	-	-	0.867	Mlig455_048176 {REF} {Length: 2869} {TRANSSPLICED} {Pfam: Orn/Lys/Arg decarboxylase, major domain [PF01276.22, score=336.6]; Orn/Lys/Arg decarboxylase, C-terminal domain [PF03711.17, score=32.0]; Aminotransferase class I and II [PF00155.23, score=28.7]; Beta-eliminating lyase [PF01212.23, score=21.7]; Cys/Met metabolism PLP-dependent enzyme [PF01053.22, score=20.1]} {RNA1509_2305} {RNA1310_6434.1} {RNA815_2364.1} Mlig455_048199 {REF} {Length: 4544} {TRANSSPLICED} {Pfam: Orn/Lys/Arg decarboxylase, major domain [PF01276.22, score=336.8]; Orn/Lys/Arg decarboxylase, C-terminal domain [PF03711.17, score=32.0]; Aminotransferase class I and II [PF00155.23, score=29.2]; Beta-eliminating lyase [PF01212.23, score=22.1]; Cys/Met metabolism PLP-dependent enzyme [PF01053.22, score=20.3]} {RNA1509_2305} {RNA1310_6434.1} {RNA815_2364.1}
4.	MligTC455_36043	215	4.49	Mlig455_046412	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.608 Region-enriched R4: 3.299/0.00544	LOXHD1	2.56	0.780	0.955	0.825	-	-	-	Mlig455_046412 {REF} {Length: 3070} {TRANSSPLICED} {Pfam: PLAT/LH2 domain [PF01477.25, score=52.2]} {Human: ENSG00000167210, LOXHD1, lipoxygenase homology domains 1, [Score=75.9, Expect=2e-13]} {Mouse: ENSMUSG00000032818, Loxhd1, lipoxygenase homology domains 1, [Score=76.6, Expect=5e-14]} {Smed: dd_Smed_v6_39713_0_1, dd_Smed_v6_39713_0_1, [RH, Score=81.3, Expect=4e-16]} {RNA1509_25188, RNA1509_53601} {RNA1310_11606, RNA1509_25188, RNA1509_53601} {RNA1509_25188, RNA1509_53601, RNA815_15282}
5.	MligTC455_27440	207	4.31	Mlig455_050456	Neo: - Age: -	DCDC1	2.493	0.802	-	0.955	0.736	-	-	Mlig455_050456 {REF} {Length: 5764} {Pfam: Cep120 protein [PF12416.10, score=40.9]} {Human: ENSG00000170959, DCDC1, doublecortin domain containing 1, [Score=90.1, Expect=9e-18]} {Smed: dd_Smed_v6_11770_0_1, dd_Smed_v6_11770_0_1, [Score=57.8, Expect=3e-08]} {RNA1509_9003} {RNA1310_581.1} {RNA815_1282}
6.	MligTC455_13942	192	4	Mlig455_015587	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.561	SYT14	2.456	0.802	-	0.952	0.702	-	-	Mlig455_015587 {REF} {Length: 3362} {Pfam: C2 domain [PF00168.32, score=38.6]} {Human: ENSG00000143469, SYT14, synaptotagmin 14, [Score=133, Expect=5e-32]; ENSG00000139973, SYT16, synaptotagmin 16, [Score=129, Expect=2e-30]} {Mouse: ENSMUSG00000016200, Syt14, synaptotagmin XIV, [Score=134, Expect=8e-32]} {Dmel: FBgn0261086, Syt14, Synaptotagmin 14, [Score=108, Expect=3e-24]} {Smed: dd_Smed_v6_9548_0_2, dd_Smed_v6_9548_0_2, [Score=136, Expect=2e-34]} {RNA1509_12596} {RNA1310_670.1, RNA1509_12596} {RNA1509_12596, RNA815_7240.1}
7.	MligTC455_53960	381	7.93	Mlig455_039523	Neo: - Age: logFC(26M/2M)=-0.527 Region-enriched R2: 1.863/0.02753	TTLL7	2.434	0.714	-	0.955	0.765	-	-	Mlig455_039523 {REF} {Length: 2811} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=44.5]} {Human: ENSG00000137941, TTLL7, tubulin tyrosine ligase like 7, [Score=146, Expect=5e-37]} {Mouse: ENSMUSG00000036745, Ttll7, tubulin tyrosine ligase-like family, member 7, [Score=261, Expect=2e-76]} {Dmel: FBgn0039501, CG5987, [Score=62.8, Expect=5e-10]} {Smed: dd_Smed_v6_13600_0_1, dd_Smed_v6_13600_0_1, [Score=118, Expect=1e-27]} {RNA1509_8901} {RNA1310_4651} {RNA815_1757}
8.	MligTC455_24871	134	2.79	Mlig455_045060	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.520		1.833	-	0.957	-	-	-	0.876	Mlig455_045060 {REF} {Length: 2095} {RNA1509_24492} {RNA1310_18406} {RNA815_9898}
9.	MligTC455_35435	632	13.16	Mlig455_067119	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.896 Region-enriched R2: 1.234/0.03490 Regeneration-downregulated R5: -1.845 Regeneration-depleted R5: -1.845		1.819	-	-	0.957	0.862	-	-	Mlig455_067119 {REF} {Length: 1795} {RNA1509_9585} {RNA1310_17157, RNA1509_9585} {RNA1509_9585, RNA815_623.1}
10.	MligTC455_51696	624	12.99	Mlig455_011356	Neo: - Age: -	FAM47E	1.818	-	-	0.961	0.857	-	-	Mlig455_011356 {REF} {Length: 2028} {Pfam: FAM47 family [PF14642.8, score=51.3]} {Human: ENSG00000189157, FAM47E, family with sequence similarity 47 member E, [RH, Score=138, Expect=9e-36]} {Mouse: ENSMUSG00000078315, Fam47c, family with sequence similarity 47, member C, [RH, Score=119, Expect=6e-29]} {Smed: dd_Smed_v6_10346_0_1, dd_Smed_v6_10346_0_1, [RH, Score=293, Expect=6e-95]} {RNA1509_41096, RNA1509_54260, RNA1509_8031} {RNA1310_12665, RNA1509_41096, RNA1509_54260} {RNA1509_41096, RNA1509_54260, RNA815_4489.1}
11.	MligTC455_30096	2033	42.36	Mlig455_039557, Mlig455_051362	Neo: - Age: - Region-enriched R5: 1.567/0.00071		1.803	-	-	0.960	0.843	-	-	Mlig455_039557 {REF} {Length: 1521} {Pfam: Farnesoic acid 0-methyl transferase [PF12248.10, score=25.4]} {RNA1509_19620, RNA1509_30151} {RNA1310_26108, RNA1509_19620, RNA1509_30151} {RNA1509_19620, RNA1509_30151, RNA815_11009} Mlig455_051362 {REF} {Length: 3486} {RNA1509_19620} {RNA1310_26108} {RNA815_11009}
12.	MligTC455_21322	2058	42.87	Mlig455_017252	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.359	RIIAD1	1.779	-	-	0.828	0.951	-	-	Mlig455_017252 {REF} {Length: 599} {TRANSSPLICED} {Human: ENSG00000178796, RIIAD1, regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1, [RH, Score=86.7, Expect=6e-23]} {Mouse: ENSMUSG00000028139, Riiad1, regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1, [RH, Score=87.4, Expect=5e-23]} {Smed: dd_Smed_v6_4716_0_2, dd_Smed_v6_4716_0_2, [RH, Score=124, Expect=8e-38]} {RNA1509_4188} {RNA1310_57362, RNA1509_4188} {RNA1509_4188, RNA815_29384.1}
13.	MligTC455_40497	258	5.37	Mlig455_005650	Neo: - Age: - Region-enriched R2: 3.635/0.02759	SLC1A2	1.722	-	-	0.964	0.758	-	-	Mlig455_005650 {REF} {Length: 2712} {Pfam: Sodium:dicarboxylate symporter family [PF00375.20, score=259.1]} {Human: ENSG00000110436, SLC1A2, solute carrier family 1 member 2, [Score=214, Expect=1e-61]; ENSG00000162383, SLC1A7, solute carrier family 1 member 7, [Score=212, Expect=4e-61]; ENSG00000079215, SLC1A3, solute carrier family 1 member 3, [Score=211, Expect=6e-61]; ENSG00000106688, SLC1A1, solute carrier family 1 member 1, [Score=207, Expect=1e-59]; ENSG00000105143, SLC1A6, solute carrier family 1 member 6, [Score=204, Expect=7e-58]} {Mouse: ENSMUSG00000005089, Slc1a2, solute carrier family 1 (glial high affinity glutamate transporter), member 2, [Score=229, Expect=3e-67]; ENSMUSG00000020142, Slc1a4, solute carrier family 1 (glutamate/neutral amino acid transporter), member 4, [Score=225, Expect=3e-66]; ENSMUSG00000001918, Slc1a5, solute carrier family 1 (neutral amino acid transporter), member 5, [Score=221, Expect=1e-64]} {Dmel: FBgn0026439, Eaat1, Excitatory amino acid transporter 1, [Score=216, Expect=2e-63]} {Celegans: WBGene00001620, glt-1, Excitatory amino acid transporter, [Score=235, Expect=1e-70]} {Smed: dd_Smed_v6_1106_0_1, dd_Smed_v6_1106_0_1, [Score=231, Expect=2e-69]} {RNA1509_23441, RNA1509_40224, RNA1509_45320} {RNA1310_8169.3, RNA1509_23441, RNA1509_40224, RNA1509_45320} {RNA1509_23441, RNA1509_40224, RNA1509_45320, RNA815_2675.1}
14.	MligTC455_46425	491	10.23	Mlig455_012189	Neo: - Age: -		1.716	-	-	0.764	0.952	-	-	Mlig455_012189 {REF} {Length: 1382} {RNA1509_53324, RNA1509_8642} {RNA1310_7508, RNA1509_53324, RNA1509_8642} {RNA1509_53324, RNA1509_8642, RNA815_176.1}
15.	MligTC455_34792	238	4.96	Mlig455_045574	Neo: - Age: logFC(26M/2M)=-0.239		0.978	-	-	0.978	-	-	-	Mlig455_045574 {REF} {Length: 4478} {Smed: dd_Smed_v6_27312_0_1, dd_Smed_v6_27312_0_1, [RH, Score=160, Expect=9e-40]} {RNA1509_6675} {RNA1310_2307, RNA1509_6675} {RNA1509_6675, RNA815_650}
16.	MligTC455_31867	118	2.46	Mlig455_015324	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_015324 {REF} {Length: 4165} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=18.7]} {RNA1509_44743, RNA1509_45704, RNA1509_45713, RNA1509_55716} {RNA1310_5450.1, RNA1509_45704, RNA1509_45713, RNA1509_55716} {RNA1509_45704, RNA1509_45713, RNA1509_55716, RNA815_16253.2}
17.	MligTC455_06659	16	0.34	Mlig455_062335	Neo: - Age: - Regeneration-upregulated R2: 5.687 Regeneration-enriched R2: 5.687		0.959	-	-	-	-	-	0.959	Mlig455_062335 {REF} {Length: 1309} {NoTransDecoderORF} {RNA1509_48872} {RNA1310_50066} {RNA815_26340}
18.	MligTC455_25429	200	4.17	Mlig455_048296, Mlig455_048322, Mlig455_048339	Neo: - Age: Up-Down-Down	ARRDC2, ARRDC4	0.952	-	0.952	-	-	-	-	Mlig455_048296 {REF} {Length: 4176} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=72.1]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=68.9]; Rgp1 [PF08737.12, score=20.6]} {Human: ENSG00000140450, ARRDC4, arrestin domain containing 4, [RH, Score=102, Expect=3e-23]} {Mouse: ENSMUSG00000042659, Arrdc4, arrestin domain containing 4, [RH, Score=103, Expect=1e-23]} {Dmel: FBgn0035103, Vdup1, Vitamin D[[3]] up-regulated protein 1, [RH, Score=115, Expect=3e-28]} {Celegans: WBGene00013043, arrd-16, ARRestin Domain protein, [Score=93.6, Expect=1e-20]} {Smed: dd_Smed_v6_8715_0_1, dd_Smed_v6_8715_0_1, [RH, Score=214, Expect=4e-64]} {RNA1509_38119} {RNA1310_8824} {RNA815_16520} Mlig455_048322 {REF} {Length: 4514} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=73.1]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=68.6]; Rgp1 [PF08737.12, score=23.3]} {Human: ENSG00000105643, ARRDC2, arrestin domain containing 2, [RH, Score=114, Expect=1e-27]} {Mouse: ENSMUSG00000042659, Arrdc4, arrestin domain containing 4, [RH, Score=104, Expect=5e-24]} {Dmel: FBgn0035103, Vdup1, Vitamin D[[3]] up-regulated protein 1, [RH, Score=119, Expect=9e-30]} {Celegans: WBGene00011732, arrd-17, Arrestin domain-containing protein 17, [Score=106, Expect=7e-25]} {Smed: dd_Smed_v6_8715_0_1, dd_Smed_v6_8715_0_1, [RH, Score=217, Expect=4e-65]} {RNA1509_38119} {RNA1310_8824} {RNA815_16520} Mlig455_048339 {REF} {Length: 3953} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=74.5]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=64.9]; Rgp1 [PF08737.12, score=23.7]} {Human: ENSG00000105643, ARRDC2, arrestin domain containing 2, [RH, Score=112, Expect=2e-26]} {Mouse: ENSMUSG00000042659, Arrdc4, arrestin domain containing 4, [RH, Score=105, Expect=2e-24]} {Dmel: FBgn0037465, CG1105, [Score=120, Expect=8e-30]} {Celegans: WBGene00011732, arrd-17, Arrestin domain-containing protein 17, [Score=103, Expect=9e-24]} {Smed: dd_Smed_v6_8715_0_1, dd_Smed_v6_8715_0_1, [RH, Score=213, Expect=2e-63]} {RNA1509_38119} {RNA1310_8824} {RNA815_16520}
19.	MligTC455_34139	1960	40.83	Mlig455_040728	Neo: - Age: Down-Down-Up		0.952	-	-	0.952	-	-	-	Mlig455_040728 {REF} {Length: 3800} {RNA1509_17252, RNA1509_32420} {RNA1310_21118, RNA1509_17252, RNA1509_32420} {RNA1509_17252, RNA1509_32420, RNA815_8948}

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