Data search
Results for MligTC455_36125
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36125 | 343 | 7.15 | Mlig455_030053, Mlig455_030089, Mlig455_030156 | Neo: - Age: Up-Down-Down |
Mlig455_030053 {REF} {Length: 5148} {TRANSSPLICED} {RNA1509_17464, RNA1509_45479} {RNA1310_8386, RNA1509_17464, RNA1509_45479} {RNA1509_17464, RNA1509_45479, RNA815_20230} Mlig455_030089 {REF} {Length: 4256} {TRANSSPLICED} {RNA1509_17464} {RNA1310_8386} {RNA815_20230} Mlig455_030156 {REF} {Length: 5114} {TRANSSPLICED} {RNA1509_17464, RNA1509_51467} {RNA1310_8386, RNA1509_51467} {RNA1509_51467, RNA815_20230} |
Cumulative graph for MligTC455_36125
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.799 | 3.269 | 0.07238 | 0.59823 | |
| RegionR2 | 1.878 | 3.269 | 0.04212 | 0.24007 | |
| RegionR3 | 0.177 | 3.269 | 0.78334 | 1.00000 | |
| RegionR4 | 1.425 | 3.269 | 0.10174 | 0.31086 | |
| RegionR5 | 1.767 | 3.269 | 0.00901 | 0.05355 | |
| RegionR6 | -0.15 | 3.269 | 0.89693 | 1.00000 | |
| RegionR7 | 0.778 | 3.269 | 0.46086 | 1.00000 | |
| RegionR8 | 0.924 | 3.269 | 0.42222 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.882 | 3.269 | 0.99992 | 1.00000 | |
| RegenerationR2 | -0.285 | 3.269 | 0.60234 | 0.91686 | |
| RegenerationR3 | 1.198 | 3.269 | 0.08598 | 0.47722 | |
| RegenerationR4 | 0.307 | 3.269 | 0.62046 | 0.92089 | |
| RegenerationR5 | 0.519 | 3.269 | 0.35152 | 0.76553 | |
| RegenerationR6 | 2.007 | 3.269 | 0.00466 | 0.08257 | |
| RegenerationBL | 1.815 | 3.269 | 0.00637 | 0.07678 | |
| RegenerationTP | 0.543 | 3.269 | 0.50381 | 0.90265 |
Genes with expression patterns similar to MligTC455_36125
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36125 | 343 | 7.15 | Mlig455_030053, Mlig455_030089, Mlig455_030156 | Neo: - Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_030053 {REF} {Length: 5148} {TRANSSPLICED} {RNA1509_17464, RNA1509_45479} {RNA1310_8386, RNA1509_17464, RNA1509_45479} {RNA1509_17464, RNA1509_45479, RNA815_20230} Mlig455_030089 {REF} {Length: 4256} {TRANSSPLICED} {RNA1509_17464} {RNA1310_8386} {RNA815_20230} Mlig455_030156 {REF} {Length: 5114} {TRANSSPLICED} {RNA1509_17464, RNA1509_51467} {RNA1310_8386, RNA1509_51467} {RNA1509_51467, RNA815_20230} |
|
| 2. | MligTC455_44729 | 137 | 2.84 | Mlig455_036479 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.298 Region-enriched R5: 1.952/0.00788 |
CABIN1 | 1.713 | - | 0.763 | - | 0.950 | - | - | Mlig455_036479 {REF} {Length: 6283} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF14559.8, score=19.2]} {Human: ENSG00000099991, CABIN1, calcineurin binding protein 1, [RH, Score=181, Expect=8e-46]} {Mouse: ENSMUSG00000020196, Cabin1, calcineurin binding protein 1, [RH, Score=180, Expect=1e-45]} {Smed: dd_Smed_v6_8249_0_1, dd_Smed_v6_8249_0_1, [Score=213, Expect=9e-57]} {RNA1509_12600} {RNA1310_3875} {RNA815_16101} |
| 3. | MligTC455_43922 | 694 | 14.47 | Mlig455_059321, Mlig455_065180 | Neo: Int S/G2/M Age: - |
TAF3 | 0.971 | - | - | - | - | - | 0.971 | Mlig455_059321 {REF} {Length: 5566} {TRANSSPLICED} {Pfam: Bromodomain associated [PF07524.15, score=27.0]} {RNA1509_28109} {RNA1310_11721} {RNA815_37896} Mlig455_065180 {REF} {Length: 5621} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=43.2]; Bromodomain associated [PF07524.15, score=25.6]; PHD-finger [PF13831.8, score=22.4]} {Human: ENSG00000165632, TAF3, TATA-box binding protein associated factor 3, [RH, Score=94.7, Expect=4e-19]} {Mouse: ENSMUSG00000025782, Taf3, TATA-box binding protein associated factor 3, [RH, Score=95.5, Expect=1e-19]} {Dmel: FBgn0026262, bip2, [RH, Score=90.9, Expect=3e-18]} {Smed: dd_Smed_v6_8419_0_1, dd_Smed_v6_8419_0_1, [RH, Score=95.1, Expect=1e-19]} {RNA1509_23746, RNA1509_28109, RNA1509_51079, RNA1509_58746} {RNA1310_11721, RNA1509_23746, RNA1509_28109, RNA1509_51079, RNA1509_58746} {RNA1509_23746, RNA1509_28109, RNA1509_51079, RNA1509_58746, RNA815_37896} |
| 4. | MligTC455_23051 | 331 | 6.89 | Mlig455_010360 | Neo: - |
ZNF467 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_010360 {REF} {Length: 6924} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=24.2]; C2H2-type zinc finger [PF13894.8, score=19.8]} {Human: ENSG00000181444, ZNF467, zinc finger protein 467, [Score=56.2, Expect=2e-07]; ENSG00000161914, ZNF653, zinc finger protein 653, [Score=55.8, Expect=3e-07]; ENSG00000105866, SP4, Sp4 transcription factor, [Score=55.8, Expect=4e-07]; ENSG00000136826, KLF4, Kruppel like factor 4, [Score=55.8, Expect=3e-07]; ENSG00000142611, PRDM16, PR/SET domain 16, [Score=54.3, Expect=1e-06]; ENSG00000166478, ZNF143, zinc finger protein 143, [Score=53.9, Expect=1e-06]} {Mouse: ENSMUSG00000068551, Zfp467, zinc finger protein 467, [Score=56.6, Expect=1e-07]; ENSMUSG00000038895, Zfp653, zinc finger protein 653, [Score=56.2, Expect=2e-07]; ENSMUSG00000061079, Zfp143, zinc finger protein 143, [Score=56.2, Expect=2e-07]; ENSMUSG00000025323, Sp4, trans-acting transcription factor 4, [Score=55.1, Expect=5e-07]; ENSMUSG00000003032, Klf4, Kruppel-like factor 4 (gut), [Score=54.7, Expect=4e-07]; ENSMUSG00000055148, Klf2, Kruppel-like factor 2 (lung), [Score=54.3, Expect=4e-07]; ENSMUSG00000039410, Prdm16, PR domain containing 16, [Score=54.3, Expect=8e-07]} {Dmel: FBgn0261705, CG42741, [Score=55.1, Expect=2e-07]} {Celegans: WBGene00009998, klf-2, Kruppel-Like Factor (Zinc finger protein), [Score=50.4, Expect=3e-06]} {Smed: dd_Smed_v6_14937_0_1, dd_Smed_v6_14937_0_1, [Score=86.3, Expect=5e-17]} {RNA1509_46411, RNA1509_6056, RNA1509_8144} {RNA1310_433, RNA1509_46411, RNA1509_6056, RNA1509_8144} {RNA1509_46411, RNA1509_6056, RNA1509_8144, RNA815_9169} |
| 5. | MligTC455_15987 | 284 | 5.91 | Mlig455_040342 | Neo: - Age: Up-Down-Down Region-enriched R4: 2.097/0.03996 |
ATP2C1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_040342 {REF} {Length: 7308} {TRANSSPLICED} {Pfam: E1-E2 ATPase [PF00122.22, score=160.2]; Cation transporting ATPase, C-terminus [PF00689.23, score=147.6]; haloacid dehalogenase-like hydrolase [PF00702.28, score=81.6]; Cation transporter/ATPase, N-terminus [PF00690.28, score=74.6]; Cation transport ATPase (P-type) [PF13246.8, score=54.4]} {Human: ENSG00000017260, ATP2C1, ATPase secretory pathway Ca2+ transporting 1, [RH, Score=1004, Expect=0.0]} {Mouse: ENSMUSG00000032570, Atp2c1, ATPase, Ca++-sequestering, [RH, Score=993, Expect=0.0]} {Dmel: FBgn0052451, SPoCk, Secretory Pathway Calcium atpase, [RH, Score=977, Expect=0.0]} {Celegans: WBGene00004063, pmr-1, Calcium-transporting ATPase, [RH, Score=924, Expect=0.0]} {Smed: dd_Smed_v6_6310_0_1, dd_Smed_v6_6310_0_1, [RH, Score=1029, Expect=0.0]} {RNA1509_11179, RNA1509_32887} {RNA1310_3155.1, RNA1509_32887} {RNA1509_32887, RNA815_1139.1} |
| 6. | MligTC455_22965 | 433 | 9.03 | Mlig455_019042 | Neo: - Age: Down-Down-Up |
0.951 | - | - | - | - | - | 0.951 | Mlig455_019042 {REF} {Length: 1514} {Pfam: Sleepless protein [PF17064.7, score=26.9]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [RH, Score=69.3, Expect=1e-15]} {RNA1509_27313, RNA1509_54222} {RNA1310_27569.1, RNA1509_54222} {RNA1509_54222, RNA815_11340} | |
| 7. | MligTC455_27961 | 161 | 3.36 | Mlig455_033788 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 2.381/0.02589 |
MYO18A | 0.951 | - | - | - | - | - | 0.951 | Mlig455_033788 {REF} {Length: 7335} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=304.4]; PDZ domain [PF17820.3, score=26.5]; PDZ domain [PF00595.26, score=25.5]; Myosin tail [PF01576.21, score=21.1]} {Human: ENSG00000196535, MYO18A, myosin XVIIIA, [RH, Score=872, Expect=0.0]} {Mouse: ENSMUSG00000000631, Myo18a, myosin XVIIIA, [RH, Score=866, Expect=0.0]} {Dmel: FBgn0026059, Mhcl, Myosin heavy chain-like, [RH, Score=877, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [Score=362, Expect=3e-101]} {Smed: dd_Smed_v6_6277_0_1, dd_Smed_v6_6277_0_1, [RH, Score=798, Expect=0.0]} {RNA1509_9265} {RNA1310_390, RNA1509_9265} {RNA1509_9265, RNA815_386} |
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