Data search
Results for MligTC455_43922
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43922 | 694 | 14.47 | Mlig455_059321, Mlig455_065180 | Neo: Int S/G2/M Age: - |
TAF3 | Mlig455_059321 {REF} {Length: 5566} {TRANSSPLICED} {Pfam: Bromodomain associated [PF07524.15, score=27.0]} {RNA1509_28109} {RNA1310_11721} {RNA815_37896} Mlig455_065180 {REF} {Length: 5621} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=43.2]; Bromodomain associated [PF07524.15, score=25.6]; PHD-finger [PF13831.8, score=22.4]} {Human: ENSG00000165632, TAF3, TATA-box binding protein associated factor 3, [RH, Score=94.7, Expect=4e-19]} {Mouse: ENSMUSG00000025782, Taf3, TATA-box binding protein associated factor 3, [RH, Score=95.5, Expect=1e-19]} {Dmel: FBgn0026262, bip2, [RH, Score=90.9, Expect=3e-18]} {Smed: dd_Smed_v6_8419_0_1, dd_Smed_v6_8419_0_1, [RH, Score=95.1, Expect=1e-19]} {RNA1509_23746, RNA1509_28109, RNA1509_51079, RNA1509_58746} {RNA1310_11721, RNA1509_23746, RNA1509_28109, RNA1509_51079, RNA1509_58746} {RNA1509_23746, RNA1509_28109, RNA1509_51079, RNA1509_58746, RNA815_37896} |
Cumulative graph for MligTC455_43922
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.924 | 4.234 | 0.05731 | 0.55343 | |
| RegionR2 | 1.506 | 4.234 | 0.08955 | 0.36699 | |
| RegionR3 | 0.935 | 4.234 | 0.26509 | 0.80979 | |
| RegionR4 | 1.104 | 4.234 | 0.22649 | 0.51864 | |
| RegionR5 | 1.292 | 4.234 | 0.06449 | 0.22460 | |
| RegionR6 | 0.816 | 4.234 | 0.33555 | 0.92321 | |
| RegionR7 | -0.431 | 4.234 | 0.94645 | 1.00000 | |
| RegionR8 | 1.701 | 4.234 | 0.05568 | 0.46100 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.698 | 4.234 | 0.15195 | 0.89464 | |
| RegenerationR2 | 0.22 | 4.234 | 0.65954 | 0.94127 | |
| RegenerationR3 | 0.418 | 4.234 | 0.47132 | 0.84496 | |
| RegenerationR4 | 0.152 | 4.234 | 0.80240 | 0.98720 | |
| RegenerationR5 | 0.795 | 4.234 | 0.12810 | 0.53253 | |
| RegenerationR6 | 1.361 | 4.234 | 0.01481 | 0.14991 | |
| RegenerationBL | 1.598 | 4.234 | 0.00722 | 0.08292 | |
| RegenerationTP | -0.364 | 4.234 | 0.63289 | 0.97928 |
Genes with expression patterns similar to MligTC455_43922
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43922 | 694 | 14.47 | Mlig455_059321, Mlig455_065180 | Neo: Int S/G2/M Age: - |
TAF3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059321 {REF} {Length: 5566} {TRANSSPLICED} {Pfam: Bromodomain associated [PF07524.15, score=27.0]} {RNA1509_28109} {RNA1310_11721} {RNA815_37896} Mlig455_065180 {REF} {Length: 5621} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=43.2]; Bromodomain associated [PF07524.15, score=25.6]; PHD-finger [PF13831.8, score=22.4]} {Human: ENSG00000165632, TAF3, TATA-box binding protein associated factor 3, [RH, Score=94.7, Expect=4e-19]} {Mouse: ENSMUSG00000025782, Taf3, TATA-box binding protein associated factor 3, [RH, Score=95.5, Expect=1e-19]} {Dmel: FBgn0026262, bip2, [RH, Score=90.9, Expect=3e-18]} {Smed: dd_Smed_v6_8419_0_1, dd_Smed_v6_8419_0_1, [RH, Score=95.1, Expect=1e-19]} {RNA1509_23746, RNA1509_28109, RNA1509_51079, RNA1509_58746} {RNA1310_11721, RNA1509_23746, RNA1509_28109, RNA1509_51079, RNA1509_58746} {RNA1509_23746, RNA1509_28109, RNA1509_51079, RNA1509_58746, RNA815_37896} |
| 2. | MligTC455_36125 | 343 | 7.15 | Mlig455_030053, Mlig455_030089, Mlig455_030156 | Neo: - Age: Up-Down-Down |
0.971 | - | - | - | - | - | 0.971 | Mlig455_030053 {REF} {Length: 5148} {TRANSSPLICED} {RNA1509_17464, RNA1509_45479} {RNA1310_8386, RNA1509_17464, RNA1509_45479} {RNA1509_17464, RNA1509_45479, RNA815_20230} Mlig455_030089 {REF} {Length: 4256} {TRANSSPLICED} {RNA1509_17464} {RNA1310_8386} {RNA815_20230} Mlig455_030156 {REF} {Length: 5114} {TRANSSPLICED} {RNA1509_17464, RNA1509_51467} {RNA1310_8386, RNA1509_51467} {RNA1509_51467, RNA815_20230} |
|
| 3. | MligTC455_22965 | 433 | 9.03 | Mlig455_019042 | Neo: - Age: Down-Down-Up |
0.966 | - | - | - | - | - | 0.966 | Mlig455_019042 {REF} {Length: 1514} {Pfam: Sleepless protein [PF17064.7, score=26.9]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [RH, Score=69.3, Expect=1e-15]} {RNA1509_27313, RNA1509_54222} {RNA1310_27569.1, RNA1509_54222} {RNA1509_54222, RNA815_11340} | |
| 4. | MligTC455_15987 | 284 | 5.91 | Mlig455_040342 | Neo: - Age: Up-Down-Down Region-enriched R4: 2.097/0.03996 |
ATP2C1 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_040342 {REF} {Length: 7308} {TRANSSPLICED} {Pfam: E1-E2 ATPase [PF00122.22, score=160.2]; Cation transporting ATPase, C-terminus [PF00689.23, score=147.6]; haloacid dehalogenase-like hydrolase [PF00702.28, score=81.6]; Cation transporter/ATPase, N-terminus [PF00690.28, score=74.6]; Cation transport ATPase (P-type) [PF13246.8, score=54.4]} {Human: ENSG00000017260, ATP2C1, ATPase secretory pathway Ca2+ transporting 1, [RH, Score=1004, Expect=0.0]} {Mouse: ENSMUSG00000032570, Atp2c1, ATPase, Ca++-sequestering, [RH, Score=993, Expect=0.0]} {Dmel: FBgn0052451, SPoCk, Secretory Pathway Calcium atpase, [RH, Score=977, Expect=0.0]} {Celegans: WBGene00004063, pmr-1, Calcium-transporting ATPase, [RH, Score=924, Expect=0.0]} {Smed: dd_Smed_v6_6310_0_1, dd_Smed_v6_6310_0_1, [RH, Score=1029, Expect=0.0]} {RNA1509_11179, RNA1509_32887} {RNA1310_3155.1, RNA1509_32887} {RNA1509_32887, RNA815_1139.1} |
| 5. | MligTC455_27961 | 161 | 3.36 | Mlig455_033788 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 2.381/0.02589 |
MYO18A | 0.958 | - | - | - | - | - | 0.958 | Mlig455_033788 {REF} {Length: 7335} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=304.4]; PDZ domain [PF17820.3, score=26.5]; PDZ domain [PF00595.26, score=25.5]; Myosin tail [PF01576.21, score=21.1]} {Human: ENSG00000196535, MYO18A, myosin XVIIIA, [RH, Score=872, Expect=0.0]} {Mouse: ENSMUSG00000000631, Myo18a, myosin XVIIIA, [RH, Score=866, Expect=0.0]} {Dmel: FBgn0026059, Mhcl, Myosin heavy chain-like, [RH, Score=877, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [Score=362, Expect=3e-101]} {Smed: dd_Smed_v6_6277_0_1, dd_Smed_v6_6277_0_1, [RH, Score=798, Expect=0.0]} {RNA1509_9265} {RNA1310_390, RNA1509_9265} {RNA1509_9265, RNA815_386} |
| 6. | MligTC455_28576 | 165 | 3.44 | Mlig455_007893 | Neo: - Age: Down-Up-Down |
NFYC | 0.957 | - | - | - | - | 0.957 | - | Mlig455_007893 {REF} {Length: 3192} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.8]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=45.4]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [RH, Score=147, Expect=8e-39]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [RH, Score=146, Expect=2e-39]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [RH, Score=135, Expect=4e-34]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=103, Expect=5e-25]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=166, Expect=4e-47]} {RNA1509_12703} {RNA1310_30593} {RNA815_29147} |
| 7. | MligTC455_46901 | 537 | 11.19 | Mlig455_051008 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R4: 1.912/0.00523 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_051008 {REF} {Length: 622} {TRANSSPLICED} {Pfam: rRNA processing [PF08524.13, score=38.9]} {Dmel: FBgn0039764, CG15535, [Score=43.1, Expect=1e-05]} {RNA1509_32573} {RNA1310_29171.3, RNA1509_32573} {RNA1509_32573, RNA815_30697} |
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