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Results for MligTC455_36203

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36203 1123 23.39 Mlig455_011960

Neo: -

Age: -

 GRIA2 Mlig455_011960 {REF} {Length: 3110} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=79.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=65.3]; Ligand-gated ion channel [PF00060.28, score=52.4]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=143, Expect=1e-35]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=141, Expect=7e-35]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=143, Expect=1e-35]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=141, Expect=7e-35]} {Dmel: FBgn0046113, GluRIIC, Glutamate receptor IIC, [Score=119, Expect=9e-28]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=123, Expect=2e-29]} {Smed: dd_Smed_v6_4267_0_1, dd_Smed_v6_4267_0_1, [Score=131, Expect=4e-32]} {RNA1509_11228, RNA1509_36268} {RNA1310_9671.1, RNA1509_36268} {RNA1509_36268, RNA815_3917}

Cumulative graph for MligTC455_36203

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.02 4.738 0.09403 0.65597
RegionR2 0.074 4.738 0.85752 1.00000
RegionR3 0.366 4.738 0.29677 0.83864
RegionR4 0.722 4.738 0.08928 0.28493
RegionR5 -0.803 4.738 0.05389 0.19784
RegionR6 0.398 4.738 0.27205 0.86118
RegionR7 0.473 4.738 0.28072 0.91344
RegionR8 0.79 4.738 0.12696 0.65508

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.162 4.738 0.22064 0.95534
RegenerationR2 0.445 4.738 0.17404 0.61404
RegenerationR3 0.26 4.738 0.47567 0.84733
RegenerationR4 0.111 4.738 0.77236 0.97737
RegenerationR5 1.054 4.738 0.00560 0.13770
RegenerationR6 -0.315 4.738 0.41437 0.74710
RegenerationBL 0.519 4.738 0.16008 0.47974
RegenerationTP -0.274 4.738 0.53454 0.92342


Genes with expression patterns similar to MligTC455_36203

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36203 1123 23.39 Mlig455_011960

Neo: -

Age: -

 GRIA2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_011960 {REF} {Length: 3110} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=79.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=65.3]; Ligand-gated ion channel [PF00060.28, score=52.4]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=143, Expect=1e-35]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=141, Expect=7e-35]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=143, Expect=1e-35]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=141, Expect=7e-35]} {Dmel: FBgn0046113, GluRIIC, Glutamate receptor IIC, [Score=119, Expect=9e-28]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=123, Expect=2e-29]} {Smed: dd_Smed_v6_4267_0_1, dd_Smed_v6_4267_0_1, [Score=131, Expect=4e-32]} {RNA1509_11228, RNA1509_36268} {RNA1310_9671.1, RNA1509_36268} {RNA1509_36268, RNA815_3917}
2. MligTC455_32317 1546 32.21 Mlig455_039677

Neo: -

Age: logFC(26M/2M)=-0.274

 BEST4 2.551 - - - 0.960 0.772 0.819 Mlig455_039677 {REF} {Length: 3379} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=182.9]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=205, Expect=9e-60]} {Mouse: ENSMUSG00000020169, Best3, bestrophin 3, [Score=193, Expect=8e-54]; ENSMUSG00000052819, Best2, bestrophin 2, [Score=191, Expect=3e-54]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=227, Expect=3e-66]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=180, Expect=5e-50]} {Smed: dd_Smed_v6_8073_0_1, dd_Smed_v6_8073_0_1, [Score=359, Expect=7e-120]} {RNA1509_15539, RNA1509_25951, RNA1509_8648} {RNA1310_8340, RNA1509_15539, RNA1509_25951, RNA1509_8648} {RNA1509_15539, RNA1509_25951, RNA1509_8648, RNA815_2922.1}
3. MligTC455_42495 908 18.91 Mlig455_001710

Neo: -

Age: logFC(26M/2M)=-0.256

Region-enriched R4: 2.166/0.04996

 DNAJB13 0.963 - - - - 0.963 - Mlig455_001710 {REF} {Length: 1576} {Pfam: DnaJ C terminal domain [PF01556.20, score=137.8]; DnaJ domain [PF00226.33, score=80.4]} {Human: ENSG00000187726, DNAJB13, DnaJ heat shock protein family (Hsp40) member B13, [RH, Score=397, Expect=5e-139]} {Mouse: ENSMUSG00000030708, Dnajb13, DnaJ heat shock protein family (Hsp40) member B13, [RH, Score=399, Expect=5e-140]} {Dmel: FBgn0031322, CG5001, [RH, Score=310, Expect=1e-104]} {Celegans: WBGene00001031, dnj-13, DNaJ domain (Prokaryotic heat shock protein), [Score=283, Expect=1e-94]} {Smed: dd_Smed_v6_4820_0_1, dd_Smed_v6_4820_0_1, [RH, Score=424, Expect=3e-150]} {RNA1509_1609, RNA1509_25559, RNA1509_33794} {RNA1310_19642, RNA1509_25559, RNA1509_33794} {RNA1509_25559, RNA1509_33794, RNA815_9344}
4. MligTC455_42112 216 4.5 Mlig455_012680

Neo: -

Age: Down-Down-Up

 0.954 - - - - 0.954 - Mlig455_012680 {REF} {Length: 1838} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=87.6]} {Dmel: FBgn0032506, CG9395, [Score=83.2, Expect=2e-16]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=205, Expect=6e-61]} {RNA1310_16265} {RNA815_5740.1}
5. MligTC455_37281 154 3.2 Mlig455_035877

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_035877 {REF} {Length: 4154} {Pfam: PDZ domain [PF00595.26, score=43.5]; PDZ domain [PF17820.3, score=41.3]; PDZ domain [PF13180.8, score=26.9]} {RNA1509_44785} {RNA1310_3900.1, RNA1509_44785} {RNA1509_44785, RNA815_7132}
6. MligTC455_53431 1383 28.81 Mlig455_043693, Mlig455_043762

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.390

Region-enriched R5: 2.144/0.00065

 LMO4 0.95 - - - 0.950 - -

Mlig455_043693 {REF} {Length: 2138} {Pfam: LIM domain [PF00412.24, score=94.1]} {Human: ENSG00000143013, LMO4, LIM domain only 4, [RH, Score=143, Expect=2e-42]} {Mouse: ENSMUSG00000028266, Lmo4, LIM domain only 4, [RH, Score=143, Expect=1e-42]} {Dmel: FBgn0032196, CG5708, [RH, Score=124, Expect=2e-34]} {Celegans: WBGene00006654, ttx-3, LIM/homeobox protein ttx-3, [Score=72.0, Expect=2e-14]} {Smed: dd_Smed_v6_27625_0_1, dd_Smed_v6_27625_0_1, [RH, Score=105, Expect=2e-27]} {RNA1509_7368} {RNA1310_20349.1, RNA1509_7368} {RNA1509_7368, RNA815_13759}

Mlig455_043762 {REF} {Length: 2141} {Pfam: LIM domain [PF00412.24, score=94.1]} {Human: ENSG00000143013, LMO4, LIM domain only 4, [RH, Score=143, Expect=2e-42]} {Mouse: ENSMUSG00000028266, Lmo4, LIM domain only 4, [RH, Score=143, Expect=1e-42]} {Dmel: FBgn0032196, CG5708, [RH, Score=124, Expect=2e-34]} {Celegans: WBGene00006654, ttx-3, LIM/homeobox protein ttx-3, [Score=71.6, Expect=2e-14]} {Smed: dd_Smed_v6_27625_0_1, dd_Smed_v6_27625_0_1, [RH, Score=105, Expect=3e-27]} {RNA1509_7368} {RNA1310_20349.1} {RNA815_13759}

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