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Results for MligTC455_36205

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36205 818 17.04 Mlig455_068364

Neo: -

Age: logFC(26M/2M)=-0.230

 GRIA2 Mlig455_068364 {REF} {Length: 2949} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=78.9]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=64.6]; Ligand-gated ion channel [PF00060.28, score=52.3]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=147, Expect=6e-37]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=146, Expect=2e-36]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=147, Expect=5e-37]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=146, Expect=1e-36]} {Dmel: FBgn0038837, CG3822, [Score=145, Expect=2e-36]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=126, Expect=3e-30]} {Smed: dd_Smed_v6_17901_0_1, dd_Smed_v6_17901_0_1, [Score=135, Expect=3e-33]} {RNA1509_11228, RNA1509_38800} {RNA1310_9671.2, RNA1509_38800} {RNA1509_38800, RNA815_3917}

Cumulative graph for MligTC455_36205

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.955 4.214 0.01762 0.36993
RegionR2 1.048 4.214 0.04581 0.25249
RegionR3 0.607 4.214 0.17220 0.69816
RegionR4 -0.399 4.214 0.43983 0.76871
RegionR5 -0.14 4.214 0.75806 1.00000
RegionR6 0.916 4.214 0.03704 0.35938
RegionR7 0.981 4.214 0.03979 0.38141
RegionR8 -0.06 4.214 0.92636 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.244 4.214 0.47823 1.00000
RegenerationR2 0.001 4.214 0.99843 1.00000
RegenerationR3 0.045 4.214 0.92764 1.00000
RegenerationR4 0.313 4.214 0.54868 0.89217
RegenerationR5 0 4.214 0.99894 1.00000
RegenerationR6 -0.378 4.214 0.44740 0.76868
RegenerationBL -0.472 4.214 0.37436 0.74291
RegenerationTP -0.612 4.214 0.30308 0.74862


Genes with expression patterns similar to MligTC455_36205

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36205 818 17.04 Mlig455_068364

Neo: -

Age: logFC(26M/2M)=-0.230

 GRIA2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_068364 {REF} {Length: 2949} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=78.9]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=64.6]; Ligand-gated ion channel [PF00060.28, score=52.3]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=147, Expect=6e-37]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=146, Expect=2e-36]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=147, Expect=5e-37]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=146, Expect=1e-36]} {Dmel: FBgn0038837, CG3822, [Score=145, Expect=2e-36]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=126, Expect=3e-30]} {Smed: dd_Smed_v6_17901_0_1, dd_Smed_v6_17901_0_1, [Score=135, Expect=3e-33]} {RNA1509_11228, RNA1509_38800} {RNA1310_9671.2, RNA1509_38800} {RNA1509_38800, RNA815_3917}
2. MligTC455_25612 578 12.04 Mlig455_030061, Mlig455_030062

Neo: -

Age: logFC(26M/2M)=-0.274

 CDH23, PCDHGB6 2.56 0.973 - 0.803 - 0.784 -

Mlig455_030061 {REF} {Length: 483} {Human: ENSG00000253305, PCDHGB6, protocadherin gamma subfamily B, 6, [Score=52.0, Expect=2e-08]} {Mouse: ENSMUSG00000103088, Pcdhgb6, protocadherin gamma subfamily B, 6, [Score=55.5, Expect=1e-09]} {Dmel: FBgn0037963, Cad87A, Cadherin 87A, [Score=47.8, Expect=3e-07]} {Celegans: WBGene00022103, cdh-12, CaDHerin family, [Score=52.8, Expect=6e-09]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=73.9, Expect=2e-16]} {RNA1509_1684} {RNA1310_428} {RNA815_149.1}

Mlig455_030062 {REF} {Length: 6990} {Pfam: Cadherin domain [PF00028.19, score=457.2]; Cadherin-like [PF08266.14, score=43.6]; RET Cadherin like domain 1 [PF17756.3, score=28.2]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=500, Expect=7e-144]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=500, Expect=6e-144]} {Dmel: FBgn0038247, Cad88C, Cadherin 88C, [RH, Score=631, Expect=0.0]} {Celegans: WBGene00017576, cdh-8, CaDHerin family, [RH, Score=209, Expect=4e-54]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [RH, Score=746, Expect=0.0]} {RNA1509_1684, RNA1509_44410} {RNA1310_428, RNA1509_1684, RNA1509_44410} {RNA1509_1684, RNA1509_44410, RNA815_149.1}
3. MligTC455_24073 886 18.47 Mlig455_022269

Neo: -

Age: logFC(26M/2M)=-0.424

 1.778 - - 0.825 - - 0.953 Mlig455_022269 {REF} {Length: 2445} {Smed: dd_Smed_v6_8763_0_1, dd_Smed_v6_8763_0_1, [RH, Score=98.6, Expect=8e-23]} {RNA1509_5814} {RNA1310_13945} {RNA815_5072}
4. MligTC455_47395 71 1.48 Mlig455_052211

Neo: -

Age: -

 CHRNA10 1.739 - - - 0.950 - 0.789 Mlig455_052211 {REF} {Length: 3367} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=210.9]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=144.4]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=125, Expect=9e-30]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=125, Expect=6e-30]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=120, Expect=4e-28]} {Dmel: FBgn0015519, nAChRalpha3, nicotinic Acetylcholine Receptor alpha3, [Score=111, Expect=9e-25]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=135, Expect=2e-33]} {Smed: dd_Smed_v6_8058_0_1, dd_Smed_v6_8058_0_1, [Score=123, Expect=3e-29]} {RNA1509_30974} {RNA1310_28768.1} {RNA815_26436}
5. MligTC455_16213 641 13.35 Mlig455_042097

Neo: -

Age: -

Region-enriched R2: 2.338/0.01794

 1.666 - - - 0.954 0.712 - Mlig455_042097 {REF} {Length: 599} {TRANSSPLICED} {RNA1509_10288} {RNA1310_13980} {RNA815_5182.1}
6. MligTC455_29428 449 9.36 Mlig455_035169

Neo: -

Age: -

 KIDINS220 0.962 - - - - - 0.962 Mlig455_035169 {REF} {Length: 4521} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=120.9]; Ankyrin repeats (many copies) [PF13857.8, score=80.2]; Ankyrin repeat [PF13606.8, score=77.6]; Ankyrin repeats (many copies) [PF13637.8, score=71.1]; Ankyrin repeat [PF00023.32, score=63.7]} {Human: ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=112, Expect=2e-24]; ENSG00000119509, INVS, inversin, [Score=107, Expect=4e-23]} {Mouse: ENSMUSG00000036333, Kidins220, kinase D-interacting substrate 220, [Score=111, Expect=2e-24]; ENSMUSG00000028344, Invs, inversin, [Score=109, Expect=6e-24]} {Dmel: FBgn0039590, CG10011, [Score=90.5, Expect=5e-18]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=80.9, Expect=4e-15]} {Smed: dd_Smed_v6_13360_0_1, dd_Smed_v6_13360_0_1, [RH, Score=335, Expect=3e-101]} {RNA1509_18067} {RNA1310_7116, RNA1509_18067} {RNA1509_18067, RNA815_15450}
7. MligTC455_45867 2035 42.39 Mlig455_029347

Neo: -

Age: -

 FLNB 0.953 - - - - - 0.953 Mlig455_029347 {REF} {Length: 5974} {Pfam: Filamin/ABP280 repeat [PF00630.21, score=295.4]; Calponin homology (CH) domain [PF00307.33, score=153.6]; YtkA-like [PF13115.8, score=28.9]; Y_Y_Y domain [PF07495.15, score=28.4]; PKD domain [PF00801.22, score=23.8]; CAMSAP CH domain [PF11971.10, score=21.7]; Domain of unknown function (DUF5060) [PF16586.7, score=19.6]} {Human: ENSG00000136068, FLNB, filamin B, [Score=353, Expect=1e-99]; ENSG00000128591, FLNC, filamin C, [Score=343, Expect=5e-96]} {Mouse: ENSMUSG00000025278, Flnb, filamin, beta, [Score=343, Expect=2e-96]; ENSMUSG00000068699, Flnc, filamin C, gamma, [Score=340, Expect=3e-95]} {Dmel: FBgn0028371, jbug, jitterbug, [Score=410, Expect=2e-118]} {Celegans: WBGene00016006, fln-2, FiLamiN (Actin binding protein) homolog, [RH, Score=428, Expect=3e-124]} {Smed: dd_Smed_v6_14262_0_1, dd_Smed_v6_14262_0_1, [RH, Score=268, Expect=2e-74]} {RNA1509_24826, RNA1509_2795, RNA1509_9669} {RNA1310_1811, RNA1509_24826, RNA1509_9669} {RNA1509_24826, RNA1509_9669, RNA815_479.1}

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