TomoSeq data search

Data search

Results for MligTC455_36322

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36322

162

3.37

Mlig455_013264

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.525

TMC5

Mlig455_013264 {REF} {Length: 3247} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=52.5]} {Human: ENSG00000103534, TMC5, transmembrane channel like 5, [Score=112, Expect=6e-25]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=97.1, Expect=3e-20]; ENSMUSG00000030650, Tmc5, transmembrane channel-like gene family 5, [Score=95.1, Expect=1e-19]} {RNA1509_58030} {RNA1310_8396, RNA1509_58030} {RNA1509_58030, RNA815_832.1}

Cumulative graph for MligTC455_36322

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.453	2.302	0.76138	1.00000
RegionR2	-0.169	2.302	0.84373	1.00000
RegionR3	0.318	2.302	0.55099	1.00000
RegionR4	-0.404	2.302	0.53316	0.85667
RegionR5	0.198	2.302	0.67870	1.00000
RegionR6	-0.489	2.302	0.45188	1.00000
RegionR7	-0.64	2.302	0.49305	1.00000
RegionR8	0.735	2.302	0.43009	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.046	2.302	0.35645	1.00000
RegenerationR2	-0.939	2.302	0.26717	0.71296
RegenerationR3	-0.252	2.302	0.73495	0.95917
RegenerationR4	0.362	2.302	0.58319	0.90630
RegenerationR5	0.542	2.302	0.35876	0.77069
RegenerationR6	0.684	2.302	0.39152	0.73093
RegenerationBL	-4.497	2.302	0.05733	0.27776
RegenerationTP	0.674	2.302	0.48307	0.89028

Genes with expression patterns similar to MligTC455_36322

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36322	162	3.37	Mlig455_013264	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.525	TMC5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013264 {REF} {Length: 3247} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=52.5]} {Human: ENSG00000103534, TMC5, transmembrane channel like 5, [Score=112, Expect=6e-25]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=97.1, Expect=3e-20]; ENSMUSG00000030650, Tmc5, transmembrane channel-like gene family 5, [Score=95.1, Expect=1e-19]} {RNA1509_58030} {RNA1310_8396, RNA1509_58030} {RNA1509_58030, RNA815_832.1}
2.	MligTC455_40003	1486	30.96	Mlig455_036985	Neo: - Age: - Region-enriched R3: 1.161/0.02334	ISOC2	2.492	0.779	-	-	0.952	-	0.761	Mlig455_036985 {REF} {Length: 2373} {TRANSSPLICED} {Pfam: Isochorismatase family [PF00857.22, score=108.8]} {Human: ENSG00000063241, ISOC2, isochorismatase domain containing 2, [RH, Score=205, Expect=5e-67]} {Mouse: ENSMUSG00000086784, Isoc2a, isochorismatase domain containing 2a, [RH, Score=209, Expect=7e-69]} {Dmel: FBgn0035044, CG3663, [RH, Score=155, Expect=1e-47]} {Celegans: WBGene00009436, marb-1, Mitochondrial Associated RiBonuclease homolog, [RH, Score=199, Expect=4e-65]} {Smed: dd_Smed_v6_6232_0_1, dd_Smed_v6_6232_0_1, [RH, Score=237, Expect=5e-80]} {RNA1509_19343} {RNA1310_40301, RNA1509_19343} {RNA1509_19343, RNA815_19391}
3.	MligTC455_35470	85	1.76	Mlig455_053182	Neo: - Age: -	FPGS	1.863	-	-	-	0.957	-	0.906	Mlig455_053182 {REF} {Length: 3458} {TRANSSPLICED} {Human: ENSG00000136877, FPGS, folylpolyglutamate synthase, [Score=202, Expect=2e-60]} {Mouse: ENSMUSG00000009566, Fpgs, folylpolyglutamyl synthetase, [Score=201, Expect=9e-60]} {Dmel: FBgn0030407, CG2543, [Score=154, Expect=1e-42]} {Celegans: WBGene00017777, F25B5.6, Putative folylpolyglutamate synthase, [Score=154, Expect=3e-43]} {Smed: dd_Smed_v6_6956_0_1, dd_Smed_v6_6956_0_1, [Score=174, Expect=2e-50]} {RNA1509_52653} {RNA1310_12883} {RNA815_5992.1}
4.	MligTC455_35469	92	1.91	Mlig455_051842	Neo: - Age: -	FPGS	1.859	-	-	-	0.956	-	0.903	Mlig455_051842 {REF} {Length: 3813} {TRANSSPLICED} {Pfam: Mur ligase family, glutamate ligase domain [PF02875.23, score=19.6]} {Human: ENSG00000136877, FPGS, folylpolyglutamate synthase, [RH, Score=321, Expect=1e-102]} {Mouse: ENSMUSG00000009566, Fpgs, folylpolyglutamyl synthetase, [RH, Score=310, Expect=6e-99]} {Dmel: FBgn0030407, CG2543, [RH, Score=247, Expect=5e-75]} {Celegans: WBGene00017777, F25B5.6, Putative folylpolyglutamate synthase, [RH, Score=273, Expect=2e-85]} {Smed: dd_Smed_v6_6956_0_1, dd_Smed_v6_6956_0_1, [RH, Score=279, Expect=4e-88]} {RNA1509_52653} {RNA1310_12883} {RNA815_5992.1}
5.	MligTC455_41994	104	2.16	Mlig455_021359	Neo: - Age: logFC(26M/2M)=-0.374	DNAJC5	1.743	-	-	-	0.964	-	0.779	Mlig455_021359 {REF} {Length: 2247} {Pfam: DnaJ domain [PF00226.33, score=92.8]} {Human: ENSG00000101152, DNAJC5, DnaJ heat shock protein family (Hsp40) member C5, [Score=148, Expect=4e-44]; ENSG00000147570, DNAJC5B, DnaJ heat shock protein family (Hsp40) member C5 beta, [Score=144, Expect=9e-43]} {Mouse: ENSMUSG00000000826, Dnajc5, DnaJ heat shock protein family (Hsp40) member C5, [Score=149, Expect=2e-44]; ENSMUSG00000027606, Dnajc5b, DnaJ heat shock protein family (Hsp40) member C5 beta, [Score=146, Expect=1e-43]} {Dmel: FBgn0004179, Csp, Cysteine string protein, [Score=170, Expect=7e-53]} {Celegans: WBGene00001032, dnj-14, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=127, Expect=5e-36]} {Smed: dd_Smed_v6_5990_0_1, dd_Smed_v6_5990_0_1, [Score=144, Expect=4e-43]} {RNA1509_17887} {RNA1310_27127.1} {RNA815_17167}
6.	MligTC455_16825	83	1.73	Mlig455_004646, Mlig455_014982, Mlig455_033046, Mlig455_067354, Mlig455_070980	Neo: - Age: Down-Up-Down Region-enriched R3: 4.629/0.04385		1.728	-	-	0.764	0.964	-	-	Mlig455_004646 {REF} {Length: 513} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080} Mlig455_014982 {REF} {Length: 176} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080} Mlig455_033046 {REF} {Length: 514} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080} Mlig455_067354 {REF} {Length: 520} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080} Mlig455_070980 {REF} {Length: 3436} {RNA1509_26883} {RNA1310_785} {RNA815_2080}
7.	MligTC455_10562	356	7.42	Mlig455_023642	Neo: - Age: -	RRAGC	1.709	-	0.759	-	0.950	-	-	Mlig455_023642 {REF} {Length: 3636} {Pfam: Gtr1/RagA G protein conserved region [PF04670.14, score=210.6]; ADP-ribosylation factor family [PF00025.23, score=31.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=24.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000116954, RRAGC, Ras related GTP binding C, [RH, Score=409, Expect=2e-140]; ENSG00000025039, RRAGD, Ras related GTP binding D, [RH, Score=399, Expect=1e-136]} {Mouse: ENSMUSG00000028646, Rragc, Ras-related GTP binding C, [RH, Score=408, Expect=2e-140]; ENSMUSG00000028278, Rragd, Ras-related GTP binding D, [RH, Score=399, Expect=5e-137]} {Dmel: FBgn0033272, RagC-D, Ras-related GTP binding C/D, [RH, Score=400, Expect=2e-137]} {Celegans: WBGene00012497, ragc-1, RAs-related GTP binding protein C homolog, [RH, Score=283, Expect=1e-92]} {Smed: dd_Smed_v6_5653_0_1, dd_Smed_v6_5653_0_1, [RH, Score=419, Expect=2e-145]} {RNA1509_9291} {RNA1310_15858.1} {RNA815_8637}
8.	MligTC455_51810	292	6.09	Mlig455_055914	Neo: - Age: logFC(26M/2M)=0.322	RAB29	1.684	-	-	-	0.729	-	0.955	Mlig455_055914 {REF} {Length: 1941} {Pfam: Ras family [PF00071.24, score=68.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=19.6]} {Human: ENSG00000117280, RAB29, RAB29, member RAS oncogene family, [RH, Score=123, Expect=3e-36]} {Mouse: ENSMUSG00000019832, Rab32, RAB32, member RAS oncogene family, [Score=127, Expect=9e-37]} {Dmel: FBgn0002567, Rab32, [Score=112, Expect=3e-31]} {Celegans: WBGene00011083, glo-1, Gut granule LOss; Rab GTPase GLO-1, [Score=106, Expect=4e-29]} {Smed: dd_Smed_v6_2915_0_1, dd_Smed_v6_2915_0_1, [Score=134, Expect=3e-40]} {RNA1509_54279} {RNA1310_15012} {RNA815_20567}
9.	MligTC455_44459	37	0.76	Mlig455_004794, Mlig455_004878	Neo: Int S/G2/M Age: -		0.982	-	-	-	0.982	-	-	Mlig455_004794 {REF} {Length: 1804} {RNA1509_13989, RNA1509_30532} {RNA1310_23928, RNA1509_13989} {RNA1509_13989, RNA815_22589} Mlig455_004878 {REF} {Length: 1394} {RNA1509_30532} {RNA1310_23928, RNA1509_30532} {RNA1509_30532, RNA815_22589}
10.	MligTC455_22816	401	8.36	Mlig455_003071, Mlig455_062819	Neo: - Age: - Region-enriched R4: 2.851/0.00069	FAM57B	0.963	-	-	0.963	-	-	-	Mlig455_003071 {REF} {Length: 3107} {TRANSSPLICED} {Pfam: TLC domain [PF03798.18, score=86.7]} {Human: ENSG00000149926, FAM57B, family with sequence similarity 57 member B, [RH, Score=119, Expect=7e-32]} {Mouse: ENSMUSG00000058966, Fam57b, family with sequence similarity 57, member B, [RH, Score=124, Expect=6e-34]} {Dmel: FBgn0028480, CG17841, [RH, Score=84.0, Expect=2e-18]} {RNA1509_29800} {RNA1310_20841.2} {RNA815_17082} Mlig455_062819 {REF} {Length: 3492} {TRANSSPLICED} {Pfam: TLC domain [PF03798.18, score=86.0]} {Human: ENSG00000149926, FAM57B, family with sequence similarity 57 member B, [RH, Score=121, Expect=1e-32]} {Mouse: ENSMUSG00000058966, Fam57b, family with sequence similarity 57, member B, [RH, Score=126, Expect=8e-35]} {Dmel: FBgn0028480, CG17841, [RH, Score=82.4, Expect=6e-18]} {RNA1509_29800} {RNA1310_20841.2} {RNA815_17082}
11.	MligTC455_27761	7	0.15	Mlig455_039475, Mlig455_046119	Neo: Int S/G2/M Age: -		0.956	-	-	-	0.956	-	-	Mlig455_039475 {REF} {Length: 443} {TRANSSPLICED} {RNA1310_77184} Mlig455_046119 {REF} {Length: 443} {TRANSSPLICED} {RNA1310_77184}
12.	MligTC455_52418	120	2.49	Mlig455_050438	Neo: - Age: Up-Down-Down		0.956	-	-	-	0.956	-	-	Mlig455_050438 {REF} {Length: 2535} {RNA1310_42173} {RNA815_14655}
13.	MligTC455_43187	579	12.05	Mlig455_048963	Neo: Int S/G2/M Age: Down-Down-Up	TMEM177	0.952	-	-	-	0.952	-	-	Mlig455_048963 {REF} {Length: 1513} {TRANSSPLICED} {Human: ENSG00000144120, TMEM177, transmembrane protein 177, [RH, Score=57.0, Expect=1e-08]} {RNA1509_20538, RNA1509_35149, RNA1509_8524} {RNA1310_20409, RNA1509_20538, RNA1509_35149, RNA1509_8524} {RNA1509_20538, RNA1509_35149, RNA1509_8524, RNA815_3297.1}
14.	MligTC455_49796	155	3.22	Mlig455_008307	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.906		0.95	-	-	-	-	-	0.950	Mlig455_008307 {REF} {Length: 1315} {RNA1509_54157} {RNA1310_15226.1} {RNA815_21558}

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