Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_52418 | 120 | 2.49 | Mlig455_050438 | Neo: - Age: Up-Down-Down |
Mlig455_050438 {REF} {Length: 2535} {RNA1310_42173} {RNA815_14655} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -4.172 | 2.138 | 0.99962 | 1.00000 | |
RegionR2 | 1.191 | 2.138 | 0.27967 | 0.66648 | |
RegionR3 | 1.313 | 2.138 | 0.17640 | 0.70472 | |
RegionR4 | 2.031 | 2.138 | 0.05240 | 0.19906 | |
RegionR5 | 1.546 | 2.138 | 0.08609 | 0.27539 | |
RegionR6 | 0.388 | 2.138 | 0.58961 | 1.00000 | |
RegionR7 | -4.817 | 2.138 | 0.99962 | 1.00000 | |
RegionR8 | 2.518 | 2.138 | 0.03375 | 0.36106 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -0.019 | 2.138 | 1.00000 | 1.00000 | |
RegenerationR2 | -0.871 | 2.138 | 0.20198 | 0.64791 | |
RegenerationR3 | -0.273 | 2.138 | 0.69901 | 0.94711 | |
RegenerationR4 | -0.814 | 2.138 | 0.26477 | 0.71244 | |
RegenerationR5 | 0.444 | 2.138 | 0.45688 | 0.83421 | |
RegenerationR6 | 1.322 | 2.138 | 0.08844 | 0.37129 | |
RegenerationBL | 0.986 | 2.138 | 0.45143 | 0.81846 | |
RegenerationTP | -0.087 | 2.138 | 0.75586 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_52418 | 120 | 2.49 | Mlig455_050438 | Neo: - Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_050438 {REF} {Length: 2535} {RNA1310_42173} {RNA815_14655} | |
2. | MligTC455_16190 | 275 | 5.74 | Mlig455_004371 | Neo: Irradiation Age: Up-Down-Up |
CCDC97 | 1.735 | - | - | 0.765 | - | - | 0.970 | Mlig455_004371 {REF} {Length: 5936} {TRANSSPLICED} {Pfam: Coiled-coil domain containing protein (DUF2052) [PF09747.11, score=126.7]; Neisseria meningitidis TspB protein [PF05616.15, score=24.3]} {Human: ENSG00000142039, CCDC97, coiled-coil domain containing 97, [RH, Score=65.5, Expect=9e-12]} {Mouse: ENSMUSG00000002608, Ccdc97, coiled-coil domain containing 97, [RH, Score=90.9, Expect=7e-21]} {Dmel: FBgn0032017, CG7810, [RH, Score=80.1, Expect=5e-17]} {Celegans: WBGene00011194, R10D12.13, [RH, Score=55.5, Expect=9e-09]} {Smed: dd_Smed_v6_4199_0_1, dd_Smed_v6_4199_0_1, [RH, Score=75.1, Expect=1e-15]} {RNA1509_28466, RNA1509_44610, RNA1509_53351} {RNA1310_30307.1, RNA1509_28466, RNA1509_44610, RNA1509_53351} {RNA1509_28466, RNA1509_44610, RNA1509_53351, RNA815_34047} |
3. | MligTC455_32457 | 242 | 5.03 | Mlig455_034415 | Neo: - Age: - |
ELAVL4 | 1.672 | - | - | - | - | 0.967 | 0.705 | Mlig455_034415 {REF} {Length: 5574} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=278.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=26.1]; Occluded RNA-recognition motif [PF16842.7, score=26.1]; Nup53/35/40-type RNA recognition motif [PF05172.15, score=22.4]} {Human: ENSG00000162374, ELAVL4, ELAV like RNA binding protein 4, [Score=192, Expect=2e-54]; ENSG00000196361, ELAVL3, ELAV like RNA binding protein 3, [Score=190, Expect=2e-53]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=190, Expect=4e-53]; ENSG00000066044, ELAVL1, ELAV like RNA binding protein 1, [Score=187, Expect=1e-52]} {Mouse: ENSMUSG00000028546, Elavl4, ELAV like RNA binding protein 4, [Score=192, Expect=2e-54]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=191, Expect=9e-54]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [Score=190, Expect=2e-53]; ENSMUSG00000040028, Elavl1, ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R), [Score=189, Expect=1e-53]} {Dmel: FBgn0086675, fne, found in neurons, [Score=191, Expect=3e-54]} {Celegans: WBGene00001368, exc-7, [Score=120, Expect=1e-28]} {Smed: dd_Smed_v6_11311_0_2, dd_Smed_v6_11311_0_2, [Score=112, Expect=1e-26]} {RNA1509_29443, RNA1509_50929, RNA1509_52194} {RNA1310_8489, RNA1509_50929, RNA1509_52194} {RNA1509_50929, RNA1509_52194, RNA815_12096} |
4. | MligTC455_50229 | 176 | 3.66 | Mlig455_010733 | Neo: - Age: - |
TAB1 | 1.668 | - | - | - | 0.951 | - | 0.717 | Mlig455_010733 {REF} {Length: 3464} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=20.5]} {Human: ENSG00000100324, TAB1, TGF-beta activated kinase 1 (MAP3K7) binding protein 1, [RH, Score=50.8, Expect=3e-06]} {Mouse: ENSMUSG00000022414, Tab1, TGF-beta activated kinase 1/MAP3K7 binding protein 1, [RH, Score=51.2, Expect=2e-06]} {RNA1509_20706} {RNA1310_18794, RNA1509_20706} {RNA1509_20706, RNA815_17460} |
5. | MligTC455_42300 | 310 | 6.45 | Mlig455_003329 | Neo: - Age: - Region-enriched R5: 1.364/0.02236 |
GCNA | 0.977 | - | - | - | - | - | 0.977 | Mlig455_003329 {REF} {Length: 2569} {TRANSSPLICED} {Pfam: SprT-like family [PF10263.11, score=86.7]; SprT-like zinc ribbon domain [PF17283.4, score=21.7]} {Human: ENSG00000147174, GCNA, germ cell nuclear acidic peptidase, [RH, Score=140, Expect=2e-34]} {Dmel: FBgn0023515, CG14814, [RH, Score=163, Expect=1e-41]} {Celegans: WBGene00022694, gcna-1, Germ Cell Nuclear Antigen, [RH, Score=126, Expect=2e-30]} {Smed: dd_Smed_v6_19176_0_2, dd_Smed_v6_19176_0_2, [RH, Score=167, Expect=2e-44]} {RNA1509_15952} {RNA1310_6594} {RNA815_2049} |
6. | MligTC455_44459 | 37 | 0.76 | Mlig455_004794, Mlig455_004878 | Neo: Int S/G2/M Age: - |
0.969 | - | - | - | 0.969 | - | - | Mlig455_004794 {REF} {Length: 1804} {RNA1509_13989, RNA1509_30532} {RNA1310_23928, RNA1509_13989} {RNA1509_13989, RNA815_22589} Mlig455_004878 {REF} {Length: 1394} {RNA1509_30532} {RNA1310_23928, RNA1509_30532} {RNA1509_30532, RNA815_22589} |
|
7. | MligTC455_45699 | 631 | 13.14 | Mlig455_002869 | Neo: Neoblast Age: - |
POLR2I | 0.964 | - | - | - | 0.964 | - | - | Mlig455_002869 {REF} {Length: 2055} {TRANSSPLICED} {Pfam: RNA polymerases M/15 Kd subunit [PF02150.18, score=51.0]; Transcription factor S-II (TFIIS) [PF01096.20, score=46.6]; Recombinase zinc beta ribbon domain [PF13408.8, score=25.9]; Ogr/Delta-like zinc finger [PF04606.14, score=22.3]} {Human: ENSG00000105258, POLR2I, RNA polymerase II subunit I, [RH, Score=174, Expect=1e-56]} {Mouse: ENSMUSG00000019738, Polr2i, polymerase (RNA) II (DNA directed) polypeptide I, [RH, Score=174, Expect=7e-57]} {Dmel: FBgn0004855, RpII15, RNA polymerase II 15kD subunit, [RH, Score=178, Expect=2e-58]} {Celegans: WBGene00022400, rpb-9, DNA-directed RNA polymerase subunit, [RH, Score=178, Expect=4e-58]} {Smed: dd_Smed_v6_3867_0_1, dd_Smed_v6_3867_0_1, [RH, Score=163, Expect=5e-53]} {RNA1509_30096} {RNA1310_52434, RNA1509_30096} {RNA1509_30096, RNA815_28699} |
8. | MligTC455_15894 | 262 | 5.45 | Mlig455_061767 | Neo: - Age: logFC(26M/2M)=0.408 |
RABGGTB | 0.96 | - | - | - | - | - | 0.960 | Mlig455_061767 {REF} {Length: 1558} {TRANSSPLICED} {Pfam: Prenyltransferase and squalene oxidase repeat [PF00432.23, score=184.4]; Squalene-hopene cyclase N-terminal domain [PF13249.8, score=19.3]} {Human: ENSG00000137955, RABGGTB, Rab geranylgeranyltransferase subunit beta, [RH, Score=384, Expect=2e-133]} {Mouse: ENSMUSG00000038975, Rabggtb, Rab geranylgeranyl transferase, b subunit, [RH, Score=374, Expect=9e-130]} {Dmel: FBgn0028970, betaggt-II, beta subunit of type II geranylgeranyl transferase, [RH, Score=362, Expect=5e-125]} {Celegans: WBGene00015099, ggtb-1, Probable geranylgeranyl transferase type-2 subunit beta, [RH, Score=364, Expect=7e-126]} {Smed: dd_Smed_v6_3769_0_1, dd_Smed_v6_3769_0_1, [RH, Score=343, Expect=1e-117]} {RNA1509_42912, RNA1509_43053} {RNA1310_22063, RNA1509_42912, RNA1509_43053} {RNA1509_42912, RNA1509_43053, RNA815_29569} |
9. | MligTC455_38007 | 1041 | 21.68 | Mlig455_056971 | Neo: Neoblast Age: Down-Down-Up |
NOP2 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_056971 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: 16S rRNA methyltransferase RsmB/F [PF01189.19, score=244.4]; N-terminal domain of 16S rRNA methyltransferase RsmF [PF17125.7, score=34.0]; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) [PF01135.21, score=25.8]; FtsJ-like methyltransferase [PF01728.21, score=23.3]; Methyltransferase domain [PF13847.8, score=20.9]; Met-10+ like-protein [PF02475.18, score=19.9]} {Human: ENSG00000111641, NOP2, NOP2 nucleolar protein, [RH, Score=469, Expect=4e-156]} {Mouse: ENSMUSG00000038279, Nop2, NOP2 nucleolar protein, [RH, Score=461, Expect=2e-153]} {Dmel: FBgn0033741, CG8545, [RH, Score=426, Expect=1e-138]} {Celegans: WBGene00021073, nol-1, NucleOLar protein, [RH, Score=392, Expect=2e-128]} {Smed: dd_Smed_v6_7417_0_1, dd_Smed_v6_7417_0_1, [RH, Score=397, Expect=4e-132]} {RNA1509_25023, RNA1509_31185} {RNA1310_9187.2, RNA1509_25023, RNA1509_31185} {RNA1509_25023, RNA1509_31185, RNA815_3009.1} |
10. | MligTC455_51740 | 453 | 9.45 | Mlig455_056894 | Neo: Irradiation Age: - Region-enriched R5: 1.157/0.00158 |
MARS | 0.96 | - | - | - | - | - | 0.960 | Mlig455_056894 {REF} {Length: 4232} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=24.5} {Pfam: tRNA synthetases class I (M) [PF09334.13, score=498.0]; Anticodon binding domain of methionyl tRNA ligase [PF19303.1, score=54.0]; tRNA synthetases class I (I, L, M and V) [PF00133.24, score=39.3]} {Human: ENSG00000166986, MARS, methionyl-tRNA synthetase, [RH, Score=798, Expect=0.0]} {Mouse: ENSMUSG00000040354, Mars, methionine-tRNA synthetase, [RH, Score=775, Expect=0.0]} {Dmel: FBgn0034401, MetRS, Methionyl-tRNA synthetase, [RH, Score=744, Expect=0.0]} {Celegans: WBGene00003415, mars-1, Methionine--tRNA ligase, cytoplasmic, [RH, Score=698, Expect=0.0]} {Smed: dd_Smed_v6_3471_0_1, dd_Smed_v6_3471_0_1, [RH, Score=671, Expect=0.0]} {RNA1509_29874} {RNA1310_13250.1, RNA1509_29874} {RNA1509_29874, RNA815_453.1} |
11. | MligTC455_36658 | 7809 | 162.69 | Mlig455_028152 | Neo: - Age: logFC(26M/2M)=0.684 |
SEC61G | 0.957 | - | - | - | - | - | 0.957 | Mlig455_028152 {REF} {Length: 1136} {Pfam: SecE/Sec61-gamma subunits of protein translocation complex [PF00584.22, score=56.6]} {Human: ENSG00000132432, SEC61G, Sec61 translocon gamma subunit, [RH, Score=123, Expect=1e-38]} {Mouse: ENSMUSG00000078974, Sec61g, SEC61, gamma subunit, [RH, Score=123, Expect=9e-39]} {Dmel: FBgn0033691, CG8860, [RH, Score=116, Expect=2e-36]} {Celegans: WBGene00001303, emo-1, Protein transport protein Sec61 subunit gamma, [RH, Score=117, Expect=1e-36]} {Smed: dd_Smed_v6_429_0_1, dd_Smed_v6_429_0_1, [RH, Score=122, Expect=6e-39]} {RNA1509_12796} {RNA1310_30368} {RNA815_14561} |
12. | MligTC455_42196 | 168 | 3.49 | Mlig455_011715 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 3.320/0.00173 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_011715 {REF} {Length: 2400} {TRANSSPLICED} {RNA1509_24615, RNA1509_33212} {RNA1310_9077.2, RNA1509_24615, RNA1509_33212} {RNA1509_24615, RNA1509_33212, RNA815_11156} | |
13. | MligTC455_44237 | 511 | 10.65 | Mlig455_000120 | Neo: - Age: logFC(26M/2M)=-0.570 |
DDX58 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_000120 {REF} {Length: 3493} {TRANSSPLICED} {Pfam: Type III restriction enzyme, res subunit [PF04851.17, score=62.5]; Helicase conserved C-terminal domain [PF00271.33, score=56.3]; C-terminal domain of RIG-I [PF11648.10, score=51.9]; DEAD/DEAH box helicase [PF00270.31, score=51.2]; RIG-I receptor C-terminal domain [PF18119.3, score=29.0]; SWI2/SNF2 ATPase [PF18766.3, score=24.4]; Terminase large subunit, T4likevirus-type, N-terminal [PF03237.17, score=20.1]} {Human: ENSG00000107201, DDX58, DExD/H-box helicase 58, [RH, Score=306, Expect=1e-88]} {Mouse: ENSMUSG00000040296, Ddx58, DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, [RH, Score=288, Expect=2e-82]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [Score=91.3, Expect=3e-18]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [Score=190, Expect=5e-50]} {Smed: dd_Smed_v6_3742_0_1, dd_Smed_v6_3742_0_1, [RH, Score=378, Expect=8e-113]} {RNA1509_32387} {RNA1310_3559.1} {RNA815_2443} |
14. | MligTC455_36322 | 162 | 3.37 | Mlig455_013264 | Neo: - |
TMC5 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_013264 {REF} {Length: 3247} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=52.5]} {Human: ENSG00000103534, TMC5, transmembrane channel like 5, [Score=112, Expect=6e-25]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=97.1, Expect=3e-20]; ENSMUSG00000030650, Tmc5, transmembrane channel-like gene family 5, [Score=95.1, Expect=1e-19]} {RNA1509_58030} {RNA1310_8396, RNA1509_58030} {RNA1509_58030, RNA815_832.1} |
15. | MligTC455_36659 | 7783 | 162.14 | Mlig455_028222 | Neo: - Age: logFC(26M/2M)=0.391 Region-enriched R5: 1.026/0.00412 |
SEC61G | 0.956 | - | - | - | - | - | 0.956 | Mlig455_028222 {REF} {Length: 1137} {Pfam: SecE/Sec61-gamma subunits of protein translocation complex [PF00584.22, score=56.6]} {Human: ENSG00000132432, SEC61G, Sec61 translocon gamma subunit, [RH, Score=123, Expect=1e-38]} {Mouse: ENSMUSG00000078974, Sec61g, SEC61, gamma subunit, [RH, Score=123, Expect=9e-39]} {Dmel: FBgn0033691, CG8860, [RH, Score=116, Expect=2e-36]} {Celegans: WBGene00001303, emo-1, Protein transport protein Sec61 subunit gamma, [RH, Score=117, Expect=1e-36]} {Smed: dd_Smed_v6_429_0_1, dd_Smed_v6_429_0_1, [RH, Score=122, Expect=6e-39]} {RNA1509_12796, RNA1509_14890, RNA1509_27826, RNA1509_32098, RNA1509_4784, RNA1509_9396} {RNA1310_31854, RNA1509_12796, RNA1509_14890, RNA1509_27826, RNA1509_32098, RNA1509_4784, RNA1509_9396} {RNA1509_12796, RNA1509_14890, RNA1509_27826, RNA1509_32098, RNA1509_4784, RNA1509_9396, RNA815_14284} |
16. | MligTC455_40003 | 1486 | 30.96 | Mlig455_036985 | Neo: - Age: - Region-enriched R3: 1.161/0.02334 |
ISOC2 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_036985 {REF} {Length: 2373} {TRANSSPLICED} {Pfam: Isochorismatase family [PF00857.22, score=108.8]} {Human: ENSG00000063241, ISOC2, isochorismatase domain containing 2, [RH, Score=205, Expect=5e-67]} {Mouse: ENSMUSG00000086784, Isoc2a, isochorismatase domain containing 2a, [RH, Score=209, Expect=7e-69]} {Dmel: FBgn0035044, CG3663, [RH, Score=155, Expect=1e-47]} {Celegans: WBGene00009436, marb-1, Mitochondrial Associated RiBonuclease homolog, [RH, Score=199, Expect=4e-65]} {Smed: dd_Smed_v6_6232_0_1, dd_Smed_v6_6232_0_1, [RH, Score=237, Expect=5e-80]} {RNA1509_19343} {RNA1310_40301, RNA1509_19343} {RNA1509_19343, RNA815_19391} |
17. | MligTC455_43572 | 61 | 1.26 | Mlig455_037945 | Neo: - |
VCX3B | 0.956 | 0.956 | - | - | - | - | - | Mlig455_037945 {REF} {Length: 2194} {Human: ENSG00000205642, VCX3B, variable charge X-linked 3B, [Score=54.7, Expect=8e-09]} {RNA1509_22457} {RNA1310_35286} {RNA815_20576} |
18. | MligTC455_35684 | 154 | 3.21 | Mlig455_038829, Mlig455_038837, Mlig455_038838, Mlig455_038917 | Neo: - Age: Down-Down-Up |
0.955 | 0.955 | - | - | - | - | - | Mlig455_038829 {REF} {Length: 2614} {TRANSSPLICED} {RNA1509_23775} {RNA1310_13318} {RNA815_5748.1} Mlig455_038837 {REF} {Length: 2042} {TRANSSPLICED} {RNA1509_23775} {RNA1310_13318} {RNA815_5748.1} Mlig455_038838 {REF} {Length: 2563} {RNA1509_23775} {RNA1310_6695.1} {RNA815_5748.1} Mlig455_038917 {REF} {Length: 2375} {TRANSSPLICED} {RNA1509_23775} {RNA1310_6695.2} {RNA815_5748.1} |
|
19. | MligTC455_35710 | 141 | 2.93 | Mlig455_059768 | Neo: - Age: - Region-enriched R5: 1.593/0.04047 |
0.955 | - | - | - | 0.955 | - | - | Mlig455_059768 {REF} {Length: 2370} {Pfam: Rsm1-like [PF08600.12, score=40.9]} {RNA1509_48673} {RNA1310_19146} {RNA815_7920} | |
20. | MligTC455_16269 | 20 | 0.42 | Mlig455_053616 | Neo: - Age: - Region-enriched R4: 5.924/0.00667 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_053616 {REF} {Length: 1143} {TRANSSPLICED} {Pfam: ParB-like nuclease domain [PF02195.20, score=32.7]} {RNA1509_13616} {RNA1310_15256} {RNA815_15257} | |
21. | MligTC455_26515 | 486 | 10.12 | Mlig455_017486, Mlig455_030905, Mlig455_033876 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.368 |
POLE | 0.953 | - | - | - | - | - | 0.953 | Mlig455_017486 {REF} {Length: 8616} {Pfam: Domain of unknown function (DUF1744) [PF08490.14, score=310.7]; DNA polymerase family B, exonuclease domain [PF03104.21, score=249.3]; DNA polymerase family B [PF00136.23, score=52.7]; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB [PF10108.11, score=40.3]; RNase_H superfamily [PF13482.8, score=30.4]} {Human: ENSG00000177084, POLE, DNA polymerase epsilon, catalytic subunit, [RH, Score=2360, Expect=0.0]} {Mouse: ENSMUSG00000007080, Pole, polymerase (DNA directed), epsilon, [RH, Score=2366, Expect=0.0]} {Dmel: FBgn0264326, DNApol-epsilon255, DNA polymerase epsilon 255kD subunit, [RH, Score=2173, Expect=0.0]} {Celegans: WBGene00009368, pole-1, DNA polymerase, [RH, Score=1610, Expect=0.0]} {Smed: dd_Smed_v6_13980_0_1, dd_Smed_v6_13980_0_1, [RH, Score=1120, Expect=0.0]} {RNA1509_52310, RNA1509_7028} {RNA1310_299.1, RNA1509_52310, RNA1509_7028} {RNA1509_52310, RNA1509_7028, RNA815_606} Mlig455_030905 {REF} {Length: 8870} {Pfam: Domain of unknown function (DUF1744) [PF08490.14, score=310.2]; DNA polymerase family B, exonuclease domain [PF03104.21, score=245.3]; DNA polymerase family B [PF00136.23, score=52.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=50.4]; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB [PF10108.11, score=40.1]; RNase_H superfamily [PF13482.8, score=30.2]} {Human: ENSG00000177084, POLE, DNA polymerase epsilon, catalytic subunit, [RH, Score=2347, Expect=0.0]} {Mouse: ENSMUSG00000007080, Pole, polymerase (DNA directed), epsilon, [RH, Score=2357, Expect=0.0]} {Dmel: FBgn0264326, DNApol-epsilon255, DNA polymerase epsilon 255kD subunit, [RH, Score=2179, Expect=0.0]} {Celegans: WBGene00009368, pole-1, DNA polymerase, [RH, Score=1608, Expect=0.0]} {Smed: dd_Smed_v6_13980_0_1, dd_Smed_v6_13980_0_1, [RH, Score=1120, Expect=0.0]} {RNA1509_7028} {RNA1310_299.1} {RNA815_606} Mlig455_033876 {REF} {Length: 656} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=34.6]} {RNA1509_35362} {RNA1310_32283} {RNA815_13686} |
22. | MligTC455_43145 | 700 | 14.58 | Mlig455_061449 | Neo: Int S/G2/M Age: Down-Up-Down |
MRPS18A | 0.953 | - | - | - | 0.953 | - | - | Mlig455_061449 {REF} {Length: 619} {TRANSSPLICED} {Pfam: Ribosomal protein S18 [PF01084.22, score=55.6]} {Human: ENSG00000096080, MRPS18A, mitochondrial ribosomal protein S18A, [RH, Score=59.3, Expect=7e-11]} {Mouse: ENSMUSG00000023967, Mrps18a, mitochondrial ribosomal protein S18A, [RH, Score=56.2, Expect=6e-10]} {Dmel: FBgn0051450, mRpS18A, mitochondrial ribosomal protein S18A, [RH, Score=53.9, Expect=2e-09]} {Smed: dd_Smed_v6_9080_0_1, dd_Smed_v6_9080_0_1, [RH, Score=92.8, Expect=2e-24]} {RNA1509_26387, RNA1509_27358} {RNA1310_38304.1, RNA1509_27358} {RNA1509_27358, RNA815_18478} |
23. | MligTC455_23354 | 985 | 20.51 | Mlig455_043725, Mlig455_043812 | Neo: - Age: - |
GEMIN5 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_043725 {REF} {Length: 4629} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=53.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.1]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=263, Expect=6e-71]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [Score=271, Expect=9e-74]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=62.0, Expect=4e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=58.5, Expect=6e-10]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=56.6, Expect=6e-08]} {RNA1509_10687} {RNA1310_1434.2} {RNA815_13032} Mlig455_043812 {REF} {Length: 4661} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=56.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.0]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=281, Expect=1e-76]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [Score=289, Expect=3e-79]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=60.8, Expect=7e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=58.2, Expect=9e-10]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=58.5, Expect=2e-08]} {RNA1509_10687, RNA1509_30279} {RNA1310_1434.2, RNA1509_30279} {RNA1509_30279, RNA815_13032} |
24. | MligTC455_35712 | 307 | 6.39 | Mlig455_070315 | Neo: Irradiation Age: - Region-enriched R5: 1.516/0.00118 |
ZC3HC1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_070315 {REF} {Length: 2604} {Pfam: C3HC zinc finger-like [PF07967.15, score=75.8]; Rsm1-like [PF08600.12, score=43.0]} {Human: ENSG00000091732, ZC3HC1, zinc finger C3HC-type containing 1, [RH, Score=79.3, Expect=2e-15]} {Mouse: ENSMUSG00000039130, Zc3hc1, zinc finger, C3HC type 1, [RH, Score=83.6, Expect=6e-17]} {RNA1509_24591, RNA1509_48673} {RNA1310_19146, RNA1509_24591} {RNA1509_24591, RNA815_7920} |
25. | MligTC455_21519 | 505 | 10.53 | Mlig455_039816 | Neo: - Age: - |
GHDC | 0.951 | 0.951 | - | - | - | - | - | Mlig455_039816 {REF} {Length: 3759} {Pfam: GH3 auxin-responsive promoter [PF03321.15, score=390.4]} {Human: ENSG00000167925, GHDC, GH3 domain containing, [Score=72.0, Expect=2e-12]} {RNA1509_59400} {RNA1310_11058.1} {RNA815_4223.1} |
26. | MligTC455_42163 | 1246 | 25.95 | Mlig455_048416 | Neo: Int S/G2/M Age: Down-Down-Up |
DR1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_048416 {REF} {Length: 1824} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=70.7]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=32.0]; CENP-W protein [PF15510.8, score=24.7]} {Human: ENSG00000117505, DR1, down-regulator of transcription 1, [RH, Score=132, Expect=7e-39]} {Mouse: ENSMUSG00000029265, Dr1, down-regulator of transcription 1, [RH, Score=132, Expect=5e-39]} {Dmel: FBgn0028926, NC2beta, Negative Cofactor 2beta, [RH, Score=127, Expect=6e-37]} {Celegans: WBGene00001092, dro-1, DR1 (One) transcription factor family, [RH, Score=90.1, Expect=1e-22]} {Smed: dd_Smed_v6_7479_0_1, dd_Smed_v6_7479_0_1, [RH, Score=125, Expect=2e-36]} {RNA1509_14024, RNA1509_24840, RNA1509_26197, RNA1509_7108} {RNA1310_37108, RNA1509_14024, RNA1509_24840, RNA1509_26197} {RNA1509_14024, RNA1509_24840, RNA1509_26197, RNA815_17293} |
27. | MligTC455_35711 | 145 | 3.01 | Mlig455_059754, Mlig455_059779 | Neo: - Age: - Region-enriched R5: 1.532/0.04866 |
ZC3HC1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_059754 {REF} {Length: 597} {Pfam: Rsm1-like [PF08600.12, score=37.1]} {RNA1509_48673} {RNA1310_19146} {RNA815_7920} Mlig455_059779 {REF} {Length: 3181} {Pfam: C3HC zinc finger-like [PF07967.15, score=74.5]; Rsm1-like [PF08600.12, score=43.1]} {Human: ENSG00000091732, ZC3HC1, zinc finger C3HC-type containing 1, [RH, Score=86.3, Expect=8e-18]} {Mouse: ENSMUSG00000039130, Zc3hc1, zinc finger, C3HC type 1, [RH, Score=90.5, Expect=2e-19]} {RNA1509_48673} {RNA1310_19146, RNA1509_48673} {RNA1509_48673, RNA815_7920} |