Data search
Results for MligTC455_36437
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36437 | 676 | 14.08 | Mlig455_033198 | Neo: Int S/G2/M Age: Down-Up-Up |
NTHL1 | Mlig455_033198 {REF} {Length: 1373} {Pfam: HhH-GPD superfamily base excision DNA repair protein [PF00730.27, score=76.1]; Helix-hairpin-helix motif [PF00633.25, score=31.2]} {Human: ENSG00000065057, NTHL1, nth like DNA glycosylase 1, [RH, Score=310, Expect=6e-105]} {Mouse: ENSMUSG00000041429, Nthl1, nth (endonuclease III)-like 1 (E.coli), [RH, Score=318, Expect=2e-108]} {Dmel: FBgn0032907, CG9272, [RH, Score=262, Expect=2e-85]} {Celegans: WBGene00011201, nth-1, Endonuclease III homolog, [RH, Score=256, Expect=2e-84]} {Smed: dd_Smed_v6_9966_0_3, dd_Smed_v6_9966_0_3, [RH, Score=295, Expect=2e-100]} {RNA1509_55205} {RNA1310_25819.1} {RNA815_11002.1} |
Cumulative graph for MligTC455_36437
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.126 | 4.136 | 0.90350 | 1.00000 | |
| RegionR2 | -0.1 | 4.136 | 0.82721 | 1.00000 | |
| RegionR3 | -0.389 | 4.136 | 0.31006 | 0.84933 | |
| RegionR4 | 0.293 | 4.136 | 0.44764 | 0.77687 | |
| RegionR5 | 0.725 | 4.136 | 0.01679 | 0.08517 | |
| RegionR6 | -0.45 | 4.136 | 0.25314 | 0.83885 | |
| RegionR7 | 0.068 | 4.136 | 0.89320 | 1.00000 | |
| RegionR8 | -0.021 | 4.136 | 0.97470 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.425 | 4.136 | 0.39781 | 1.00000 | |
| RegenerationR2 | -0.275 | 4.136 | 0.46263 | 0.85370 | |
| RegenerationR3 | 0.588 | 4.136 | 0.14139 | 0.56746 | |
| RegenerationR4 | 0.176 | 4.136 | 0.63236 | 0.92417 | |
| RegenerationR5 | -0.188 | 4.136 | 0.56557 | 0.89419 | |
| RegenerationR6 | 0.723 | 4.136 | 0.07537 | 0.34306 | |
| RegenerationBL | 0.574 | 4.136 | 0.22156 | 0.56934 | |
| RegenerationTP | -0.447 | 4.136 | 0.46035 | 0.87419 |
Genes with expression patterns similar to MligTC455_36437
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36437 | 676 | 14.08 | Mlig455_033198 | Neo: Int S/G2/M Age: Down-Up-Up |
NTHL1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_033198 {REF} {Length: 1373} {Pfam: HhH-GPD superfamily base excision DNA repair protein [PF00730.27, score=76.1]; Helix-hairpin-helix motif [PF00633.25, score=31.2]} {Human: ENSG00000065057, NTHL1, nth like DNA glycosylase 1, [RH, Score=310, Expect=6e-105]} {Mouse: ENSMUSG00000041429, Nthl1, nth (endonuclease III)-like 1 (E.coli), [RH, Score=318, Expect=2e-108]} {Dmel: FBgn0032907, CG9272, [RH, Score=262, Expect=2e-85]} {Celegans: WBGene00011201, nth-1, Endonuclease III homolog, [RH, Score=256, Expect=2e-84]} {Smed: dd_Smed_v6_9966_0_3, dd_Smed_v6_9966_0_3, [RH, Score=295, Expect=2e-100]} {RNA1509_55205} {RNA1310_25819.1} {RNA815_11002.1} |
| 2. | MligTC455_40366 | 1075 | 22.39 | Mlig455_003182, Mlig455_003384 | Neo: Neoblast, stringent Age: - Region-enriched R5: 2.088/0.00106 |
WDHD1 | 2.482 | 0.710 | - | - | - | 0.811 | 0.961 | Mlig455_003182 {REF} {Length: 5013} {Pfam: Minichromosome loss protein, Mcl1, middle region [PF12341.10, score=152.4]; WD domain, G-beta repeat [PF00400.34, score=49.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.7]} {Human: ENSG00000198554, WDHD1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=138, Expect=9e-33]} {Mouse: ENSMUSG00000037572, Wdhd1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=137, Expect=1e-32]} {Dmel: FBgn0033890, Ctf4, Chromosome transmission fidelity 4, [RH, Score=107, Expect=2e-23]} {Celegans: WBGene00013862, wdr-5.3, WD repeat-containing protein wdr-5.3, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_19827_0_1, dd_Smed_v6_19827_0_1, [Score=48.5, Expect=1e-05]} {RNA1509_9571} {RNA1310_2526.2} {RNA815_1263} Mlig455_003384 {REF} {Length: 5055} {Pfam: Minichromosome loss protein, Mcl1, middle region [PF12341.10, score=153.6]; WD domain, G-beta repeat [PF00400.34, score=49.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.7]} {Human: ENSG00000198554, WDHD1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=139, Expect=5e-33]} {Mouse: ENSMUSG00000037572, Wdhd1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=138, Expect=7e-33]} {Dmel: FBgn0033890, Ctf4, Chromosome transmission fidelity 4, [RH, Score=108, Expect=1e-23]} {Celegans: WBGene00013862, wdr-5.3, WD repeat-containing protein wdr-5.3, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_19827_0_1, dd_Smed_v6_19827_0_1, [Score=48.5, Expect=1e-05]} {RNA1509_9571} {RNA1310_2526.2, RNA1509_9571} {RNA1509_9571, RNA815_1263} |
| 3. | MligTC455_35423 | 1070 | 22.28 | Mlig455_043797 | Neo: Int S/G2/M Age: Up-Down-Up |
DIMT1 | 1.673 | - | 0.711 | - | - | 0.962 | - | Mlig455_043797 {REF} {Length: 1409} {TRANSSPLICED} {Pfam: Ribosomal RNA adenine dimethylase [PF00398.22, score=216.0]; Methyltransferase domain [PF13649.8, score=31.6]; Methyltransferase domain [PF08241.14, score=21.8]; Methyltransferase small domain [PF05175.16, score=20.2]; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) [PF01135.21, score=20.0]} {Human: ENSG00000086189, DIMT1, DIM1 dimethyladenosine transferase 1 homolog, [RH, Score=350, Expect=8e-121]} {Mouse: ENSMUSG00000021692, Dimt1, DIM1 dimethyladenosine transferase 1-like (S. cerevisiae), [RH, Score=351, Expect=3e-121]} {Dmel: FBgn0039627, CG11837, [RH, Score=361, Expect=2e-125]} {Celegans: WBGene00008455, E02H1.1, Probable dimethyladenosine transferase, [RH, Score=333, Expect=2e-114]} {Smed: dd_Smed_v6_5268_0_1, dd_Smed_v6_5268_0_1, [RH, Score=337, Expect=9e-116]} {RNA1509_18691, RNA1509_9015} {RNA1310_23608.1, RNA1509_18691, RNA1509_9015} {RNA1509_18691, RNA1509_9015, RNA815_9867} |
| 4. | MligTC455_53921 | 445 | 9.27 | Mlig455_032398, Mlig455_032415 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.453 Region-enriched R4: 2.795/0.00003 |
0.97 | - | - | - | - | - | 0.970 | Mlig455_032398 {REF} {Length: 396} {TRANSSPLICED} {RNA1509_48457} {RNA1310_18461} {RNA815_47535} Mlig455_032415 {REF} {Length: 399} {TRANSSPLICED} {RNA1509_48457} {RNA1310_18461} {RNA815_47535} |
|
| 5. | MligTC455_47487 | 816 | 17.01 | Mlig455_002254 | Neo: - Age: Down-Up-Up |
0.963 | - | - | - | - | 0.963 | - | Mlig455_002254 {REF} {Length: 3981} {TRANSSPLICED} {RNA1509_8421} {RNA1310_19895} {RNA815_8122.1} | |
| 6. | MligTC455_47203 | 1426 | 29.71 | Mlig455_025975 | Neo: Int S/G2/M Age: - Region-specific R4: 2.069 Region-enriched R4: 1.205/0.00014 |
ORAI2 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_025975 {REF} {Length: 1221} {TRANSSPLICED} {Pfam: Mediator of CRAC channel activity [PF07856.14, score=190.1]} {Human: ENSG00000160991, ORAI2, ORAI calcium release-activated calcium modulator 2, [Score=164, Expect=2e-49]; ENSG00000285150, ORAI1, ORAI calcium release-activated calcium modulator 1, [Score=160, Expect=3e-48]; ENSG00000276045, ORAI1, ORAI calcium release-activated calcium modulator 1, [Score=160, Expect=1e-47]} {Mouse: ENSMUSG00000039747, Orai2, ORAI calcium release-activated calcium modulator 2, [Score=167, Expect=1e-50]; ENSMUSG00000049686, Orai1, ORAI calcium release-activated calcium modulator 1, [Score=164, Expect=5e-49]} {Dmel: FBgn0041585, olf186-F, [RH, Score=171, Expect=2e-51]} {Celegans: WBGene00015648, orai-1, ORAI (Store-operated calcium channel) homolog, [RH, Score=118, Expect=1e-31]} {Smed: dd_Smed_v6_8774_0_1, dd_Smed_v6_8774_0_1, [RH, Score=185, Expect=1e-58]} {RNA1509_17486, RNA1509_28212, RNA1509_28273, RNA1509_54417} {RNA1310_8834, RNA1509_17486, RNA1509_28212, RNA1509_28273, RNA1509_54417} {RNA1509_17486, RNA1509_28212, RNA1509_28273, RNA1509_54417, RNA815_4634.1} |
Berezikov Lab - 2020-2021 © ERIBA