TomoSeq data search

Data search

Results for MligTC455_53921

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_53921	445	9.27	Mlig455_032398, Mlig455_032415	Neo: Int S/G2/M Age: logFC(26M/2M)=0.453 Region-enriched R4: 2.795/0.00003 Region-enriched R5: 1.712/0.00211		Mlig455_032398 {REF} {Length: 396} {TRANSSPLICED} {RNA1509_48457} {RNA1310_18461} {RNA815_47535} Mlig455_032415 {REF} {Length: 399} {TRANSSPLICED} {RNA1509_48457} {RNA1310_18461} {RNA815_47535}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_53921

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.113	3.738	0.45486	1.00000
RegionR2	-0.378	3.738	0.55469	0.91900
RegionR3	0.139	3.738	0.78475	1.00000
RegionR4	2.795	3.738	0.00000	0.00003
RegionR5	1.712	3.738	0.00014	0.00211
RegionR6	1.019	3.738	0.04111	0.38076
RegionR7	-0.881	3.738	0.22315	0.84473
RegionR8	-3.294	3.738	0.00249	0.08525

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.963	3.738	0.24586	0.96633
RegenerationR2	-0.632	3.738	0.23530	0.68282
RegenerationR3	-0.307	3.738	0.57962	0.89864
RegenerationR4	-0.542	3.738	0.31579	0.75506
RegenerationR5	-0.643	3.738	0.18674	0.61744
RegenerationR6	-0.664	3.738	0.22647	0.57184
RegenerationBL	-0.515	3.738	0.58398	0.93535
RegenerationTP	1.596	3.738	0.07041	0.42568

Genes with expression patterns similar to MligTC455_53921

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53921	445	9.27	Mlig455_032398, Mlig455_032415	Neo: Int S/G2/M Age: logFC(26M/2M)=0.453 Region-enriched R4: 2.795/0.00003 Region-enriched R5: 1.712/0.00211		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_032398 {REF} {Length: 396} {TRANSSPLICED} {RNA1509_48457} {RNA1310_18461} {RNA815_47535} Mlig455_032415 {REF} {Length: 399} {TRANSSPLICED} {RNA1509_48457} {RNA1310_18461} {RNA815_47535}
2.	MligTC455_36437	676	14.08	Mlig455_033198	Neo: Int S/G2/M Age: Down-Up-Up	NTHL1	0.97	-	-	-	-	-	0.970	Mlig455_033198 {REF} {Length: 1373} {Pfam: HhH-GPD superfamily base excision DNA repair protein [PF00730.27, score=76.1]; Helix-hairpin-helix motif [PF00633.25, score=31.2]} {Human: ENSG00000065057, NTHL1, nth like DNA glycosylase 1, [RH, Score=310, Expect=6e-105]} {Mouse: ENSMUSG00000041429, Nthl1, nth (endonuclease III)-like 1 (E.coli), [RH, Score=318, Expect=2e-108]} {Dmel: FBgn0032907, CG9272, [RH, Score=262, Expect=2e-85]} {Celegans: WBGene00011201, nth-1, Endonuclease III homolog, [RH, Score=256, Expect=2e-84]} {Smed: dd_Smed_v6_9966_0_3, dd_Smed_v6_9966_0_3, [RH, Score=295, Expect=2e-100]} {RNA1509_55205} {RNA1310_25819.1} {RNA815_11002.1}
3.	MligTC455_40366	1075	22.39	Mlig455_003182, Mlig455_003384	Neo: Neoblast, stringent Age: - Region-enriched R5: 2.088/0.00106 Region-enriched R4: 1.952/0.01523	WDHD1	0.958	-	-	-	-	-	0.958	Mlig455_003182 {REF} {Length: 5013} {Pfam: Minichromosome loss protein, Mcl1, middle region [PF12341.10, score=152.4]; WD domain, G-beta repeat [PF00400.34, score=49.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.7]} {Human: ENSG00000198554, WDHD1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=138, Expect=9e-33]} {Mouse: ENSMUSG00000037572, Wdhd1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=137, Expect=1e-32]} {Dmel: FBgn0033890, Ctf4, Chromosome transmission fidelity 4, [RH, Score=107, Expect=2e-23]} {Celegans: WBGene00013862, wdr-5.3, WD repeat-containing protein wdr-5.3, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_19827_0_1, dd_Smed_v6_19827_0_1, [Score=48.5, Expect=1e-05]} {RNA1509_9571} {RNA1310_2526.2} {RNA815_1263} Mlig455_003384 {REF} {Length: 5055} {Pfam: Minichromosome loss protein, Mcl1, middle region [PF12341.10, score=153.6]; WD domain, G-beta repeat [PF00400.34, score=49.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.7]} {Human: ENSG00000198554, WDHD1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=139, Expect=5e-33]} {Mouse: ENSMUSG00000037572, Wdhd1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=138, Expect=7e-33]} {Dmel: FBgn0033890, Ctf4, Chromosome transmission fidelity 4, [RH, Score=108, Expect=1e-23]} {Celegans: WBGene00013862, wdr-5.3, WD repeat-containing protein wdr-5.3, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_19827_0_1, dd_Smed_v6_19827_0_1, [Score=48.5, Expect=1e-05]} {RNA1509_9571} {RNA1310_2526.2, RNA1509_9571} {RNA1509_9571, RNA815_1263}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_53921

445

9.27

Mlig455_032398, Mlig455_032415

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.453

Region-enriched R4: 2.795/0.00003
Region-enriched R5: 1.712/0.00211

1.000

Mlig455_032398 {REF} {Length: 396} {TRANSSPLICED} {RNA1509_48457} {RNA1310_18461} {RNA815_47535}

Mlig455_032415 {REF} {Length: 399} {TRANSSPLICED} {RNA1509_48457} {RNA1310_18461} {RNA815_47535}

MligTC455_36437

676

14.08

Mlig455_033198

Neo: Int S/G2/M

Age: Down-Up-Up

NTHL1

0.97

0.970

Mlig455_033198 {REF} {Length: 1373} {Pfam: HhH-GPD superfamily base excision DNA repair protein [PF00730.27, score=76.1]; Helix-hairpin-helix motif [PF00633.25, score=31.2]} {Human: ENSG00000065057, NTHL1, nth like DNA glycosylase 1, [RH, Score=310, Expect=6e-105]} {Mouse: ENSMUSG00000041429, Nthl1, nth (endonuclease III)-like 1 (E.coli), [RH, Score=318, Expect=2e-108]} {Dmel: FBgn0032907, CG9272, [RH, Score=262, Expect=2e-85]} {Celegans: WBGene00011201, nth-1, Endonuclease III homolog, [RH, Score=256, Expect=2e-84]} {Smed: dd_Smed_v6_9966_0_3, dd_Smed_v6_9966_0_3, [RH, Score=295, Expect=2e-100]} {RNA1509_55205} {RNA1310_25819.1} {RNA815_11002.1}

MligTC455_40366

1075

22.39

Mlig455_003182, Mlig455_003384

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 2.088/0.00106
Region-enriched R4: 1.952/0.01523

WDHD1

0.958

Mlig455_003182 {REF} {Length: 5013} {Pfam: Minichromosome loss protein, Mcl1, middle region [PF12341.10, score=152.4]; WD domain, G-beta repeat [PF00400.34, score=49.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.7]} {Human: ENSG00000198554, WDHD1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=138, Expect=9e-33]} {Mouse: ENSMUSG00000037572, Wdhd1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=137, Expect=1e-32]} {Dmel: FBgn0033890, Ctf4, Chromosome transmission fidelity 4, [RH, Score=107, Expect=2e-23]} {Celegans: WBGene00013862, wdr-5.3, WD repeat-containing protein wdr-5.3, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_19827_0_1, dd_Smed_v6_19827_0_1, [Score=48.5, Expect=1e-05]} {RNA1509_9571} {RNA1310_2526.2} {RNA815_1263}

Mlig455_003384 {REF} {Length: 5055} {Pfam: Minichromosome loss protein, Mcl1, middle region [PF12341.10, score=153.6]; WD domain, G-beta repeat [PF00400.34, score=49.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.7]} {Human: ENSG00000198554, WDHD1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=139, Expect=5e-33]} {Mouse: ENSMUSG00000037572, Wdhd1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=138, Expect=7e-33]} {Dmel: FBgn0033890, Ctf4, Chromosome transmission fidelity 4, [RH, Score=108, Expect=1e-23]} {Celegans: WBGene00013862, wdr-5.3, WD repeat-containing protein wdr-5.3, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_19827_0_1, dd_Smed_v6_19827_0_1, [Score=48.5, Expect=1e-05]} {RNA1509_9571} {RNA1310_2526.2, RNA1509_9571} {RNA1509_9571, RNA815_1263}