Data search
Results for MligTC455_36754
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36754 | 154 | 3.21 | Mlig455_070325 | Neo: - Age: Down-Down-Up Region-enriched R4: 3.037/0.00756 |
ZNF91 | Mlig455_070325 {REF} {Length: 3714} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=66.2]; C2H2-type zinc finger [PF13894.8, score=55.8]; Zinc-finger double domain [PF13465.8, score=48.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=31.0]; zinc-finger-containing domain [PF11672.10, score=19.1]} {Human: ENSG00000167232, ZNF91, zinc finger protein 91, [Score=103, Expect=5e-22]; ENSG00000196757, ZNF700, zinc finger protein 700, [Score=103, Expect=2e-22]} {Mouse: ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=109, Expect=2e-24]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=106, Expect=1e-23]} {Dmel: FBgn0038301, CG6654, [Score=75.5, Expect=8e-14]} {Celegans: WBGene00003380, mnm-2, Zinc finger protein mnm-2, [Score=76.3, Expect=3e-15]} {Smed: dd_Smed_v6_10911_0_1, dd_Smed_v6_10911_0_1, [Score=95.1, Expect=5e-20]} {RNA1509_18013} {RNA1310_5466.1} {RNA815_8226} |
Cumulative graph for MligTC455_36754
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.94 | 2.485 | 0.99956 | 1.00000 | |
| RegionR2 | 0.8 | 2.485 | 0.41547 | 0.80862 | |
| RegionR3 | 1.09 | 2.485 | 0.25767 | 0.80167 | |
| RegionR4 | 3.037 | 2.485 | 0.00066 | 0.00756 | |
| RegionR5 | 2.477 | 2.485 | 0.00100 | 0.01015 | |
| RegionR6 | 1.603 | 2.485 | 0.08936 | 0.55051 | |
| RegionR7 | -5.263 | 2.485 | 0.99954 | 1.00000 | |
| RegionR8 | 1.197 | 2.485 | 0.33466 | 0.96756 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.141 | 2.485 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.064 | 2.485 | 0.91382 | 1.00000 | |
| RegenerationR3 | -0.38 | 2.485 | 0.56849 | 0.89334 | |
| RegenerationR4 | -1.754 | 2.485 | 0.00840 | 0.13644 | |
| RegenerationR5 | -0.531 | 2.485 | 0.31083 | 0.73652 | |
| RegenerationR6 | 0.125 | 2.485 | 0.84656 | 0.99852 | |
| RegenerationBL | 1.304 | 2.485 | 0.31490 | 0.68119 | |
| RegenerationTP | 2.596 | 2.485 | 0.10793 | 0.50733 |
Genes with expression patterns similar to MligTC455_36754
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36754 | 154 | 3.21 | Mlig455_070325 | Neo: - Age: Down-Down-Up Region-enriched R4: 3.037/0.00756 |
ZNF91 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_070325 {REF} {Length: 3714} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=66.2]; C2H2-type zinc finger [PF13894.8, score=55.8]; Zinc-finger double domain [PF13465.8, score=48.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=31.0]; zinc-finger-containing domain [PF11672.10, score=19.1]} {Human: ENSG00000167232, ZNF91, zinc finger protein 91, [Score=103, Expect=5e-22]; ENSG00000196757, ZNF700, zinc finger protein 700, [Score=103, Expect=2e-22]} {Mouse: ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=109, Expect=2e-24]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=106, Expect=1e-23]} {Dmel: FBgn0038301, CG6654, [Score=75.5, Expect=8e-14]} {Celegans: WBGene00003380, mnm-2, Zinc finger protein mnm-2, [Score=76.3, Expect=3e-15]} {Smed: dd_Smed_v6_10911_0_1, dd_Smed_v6_10911_0_1, [Score=95.1, Expect=5e-20]} {RNA1509_18013} {RNA1310_5466.1} {RNA815_8226} |
| 2. | MligTC455_36753 | 212 | 4.42 | Mlig455_055024 | Neo: Irradiation Age: Up-Up-Down Region-enriched R4: 1.685/0.04355 |
ZNF700 | 4.613 | 0.940 | - | 0.961 | 0.943 | 0.931 | 0.838 | Mlig455_055024 {REF} {Length: 3631} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=64.7]; C2H2-type zinc finger [PF13894.8, score=54.2]; Zinc-finger double domain [PF13465.8, score=47.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=29.6]; zinc-finger-containing domain [PF11672.10, score=23.2]} {Human: ENSG00000196757, ZNF700, zinc finger protein 700, [Score=107, Expect=2e-23]} {Mouse: ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=110, Expect=3e-24]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=108, Expect=6e-24]} {Dmel: FBgn0000286, Cf2, Chorion factor 2, [Score=74.7, Expect=1e-13]} {Celegans: WBGene00003380, mnm-2, Zinc finger protein mnm-2, [Score=76.6, Expect=3e-15]} {Smed: dd_Smed_v6_10911_0_1, dd_Smed_v6_10911_0_1, [Score=94.7, Expect=7e-20]} {RNA1509_18013} {RNA1310_5466.1} {RNA815_8226} |
| 3. | MligTC455_22005 | 526 | 10.95 | Mlig455_050414 | Neo: - |
AP1G1 | 1.748 | - | - | - | 0.796 | - | 0.952 | Mlig455_050414 {REF} {Length: 4257} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=327.1]; Adaptin C-terminal domain [PF02883.22, score=77.7]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=45.1]} {Human: ENSG00000166747, AP1G1, adaptor related protein complex 1 subunit gamma 1, [Score=669, Expect=0.0]} {Mouse: ENSMUSG00000031731, Ap1g1, adaptor protein complex AP-1, gamma 1 subunit, [Score=669, Expect=0.0]} {Dmel: FBgn0030089, AP-1gamma, Adaptor Protein complex 1, gamma subunit, [Score=556, Expect=0.0]} {Celegans: WBGene00000158, apg-1, AdaPtin, Gamma chain (Clathrin associated complex), [Score=564, Expect=0.0]} {Smed: dd_Smed_v6_2681_0_1, dd_Smed_v6_2681_0_1, [Score=711, Expect=0.0]} {RNA1509_13881} {RNA1310_4552} {RNA815_5877} |
| 4. | MligTC455_43721 | 327 | 6.82 | Mlig455_063423 | Neo: - Age: - Region-enriched R3: 2.456/0.03595 |
1.667 | 0.713 | - | 0.954 | - | - | - | Mlig455_063423 {REF} {Length: 2914} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1295) [PF06966.14, score=191.4]; 3-oxo-5-alpha-steroid 4-dehydrogenase [PF02544.18, score=27.0]; Phospholipid methyltransferase [PF04191.15, score=21.1]; Isoprenylcysteine carboxyl methyltransferase (ICMT) family [PF04140.16, score=20.9]} {Dmel: FBgn0035914, CG6282, [RH, Score=167, Expect=2e-49]} {Smed: dd_Smed_v6_14327_0_1, dd_Smed_v6_14327_0_1, [RH, Score=156, Expect=1e-45]} {RNA1509_35384} {RNA1310_33212} {RNA815_13020.1} | |
| 5. | MligTC455_39778 | 116 | 2.42 | Mlig455_038462 | Neo: - Age: - |
TBC1D19 | 0.974 | - | - | 0.974 | - | - | - | Mlig455_038462 {REF} {Length: 2382} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=47.4]} {Human: ENSG00000109680, TBC1D19, TBC1 domain family member 19, [RH, Score=421, Expect=6e-142]} {Mouse: ENSMUSG00000039178, Tbc1d19, TBC1 domain family, member 19, [RH, Score=415, Expect=5e-140]} {Dmel: FBgn0031690, CG7742, [RH, Score=347, Expect=1e-113]} {Smed: dd_Smed_v6_15291_0_1, dd_Smed_v6_15291_0_1, [RH, Score=445, Expect=1e-152]} {RNA1509_25971, RNA1509_59794} {RNA1310_9230, RNA1509_25971, RNA1509_59794} {RNA1509_25971, RNA1509_59794, RNA815_6511} |
| 6. | MligTC455_48334 | 3379 | 70.4 | Mlig455_016007, Mlig455_016011 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.240 Region-enriched R4: 1.214/0.00484 Regeneration-upregulated BL: 1.367 Regeneration-enriched BL: 1.367 |
STT3A | 0.961 | - | - | 0.961 | - | - | - | Mlig455_016007 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=490.4]; Dolichyl-phosphate-mannose-protein mannosyltransferase [PF13231.8, score=24.3]} {Human: ENSG00000134910, STT3A, STT3A, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1080, Expect=0.0]} {Mouse: ENSMUSG00000032116, Stt3a, STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae), [RH, Score=1077, Expect=0.0]} {Dmel: FBgn0031149, Stt3A, Catalytic subunit 3A of the oligosaccharyltransferase complex, [RH, Score=1066, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [Score=841, Expect=0.0]} {Smed: dd_Smed_v6_1174_0_1, dd_Smed_v6_1174_0_1, [RH, Score=1102, Expect=0.0]} {RNA1509_2426} {RNA1310_7279} {RNA815_3344} Mlig455_016011 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=491.8]; Dolichyl-phosphate-mannose-protein mannosyltransferase [PF13231.8, score=24.2]} {Human: ENSG00000134910, STT3A, STT3A, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1081, Expect=0.0]} {Mouse: ENSMUSG00000032116, Stt3a, STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae), [RH, Score=1077, Expect=0.0]} {Dmel: FBgn0031149, Stt3A, Catalytic subunit 3A of the oligosaccharyltransferase complex, [RH, Score=1066, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [Score=841, Expect=0.0]} {Smed: dd_Smed_v6_1174_0_1, dd_Smed_v6_1174_0_1, [RH, Score=1103, Expect=0.0]} {RNA1509_2426} {RNA1310_7279, RNA1509_2426} {RNA1509_2426, RNA815_3344} |
| 7. | MligTC455_23204 | 85 | 1.76 | Mlig455_056581 | Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 3.882/0.00114 |
LRRK2 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_056581 {REF} {Length: 9303} {Pfam: Leucine rich repeat [PF13855.8, score=96.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=69.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=62.9]; C-terminal of Roc, COR, domain [PF16095.7, score=45.2]; Ras family [PF00071.24, score=35.1]; Leucine-rich repeat [PF14580.8, score=23.9]} {Human: ENSG00000188906, LRRK2, leucine rich repeat kinase 2, [Score=396, Expect=6e-111]} {Mouse: ENSMUSG00000036273, Lrrk2, leucine-rich repeat kinase 2, [Score=407, Expect=3e-114]} {Dmel: FBgn0038816, Lrrk, Leucine-rich repeat kinase, [Score=139, Expect=3e-32]} {Celegans: WBGene00003068, lrk-1, Leucine-rich repeat serine/threonine-protein kinase 1, [Score=136, Expect=2e-31]} {Smed: dd_Smed_v6_7343_0_2, dd_Smed_v6_7343_0_2, [Score=328, Expect=2e-90]} {RNA1509_6991} {RNA1310_1909.1} {RNA815_15495.1} |
| 8. | MligTC455_49289 | 402 | 8.37 | Mlig455_009864 | Neo: Neoblast, stringent Age: - |
0.96 | - | - | 0.960 | - | - | - | Mlig455_009864 {REF} {Length: 2032} {TRANSSPLICED} {RNA1509_12825, RNA1509_19362, RNA1509_60056} {RNA1310_24631, RNA1509_12825, RNA1509_19362, RNA1509_60056} {RNA1509_12825, RNA1509_19362, RNA1509_60056, RNA815_4319.3} | |
| 9. | MligTC455_16183 | 94 | 1.97 | Mlig455_030155 | Neo: - Age: Up-Up-Down |
FPGS | 0.955 | - | - | - | 0.955 | - | - | Mlig455_030155 {REF} {Length: 2353} {TRANSSPLICED} {Human: ENSG00000136877, FPGS, folylpolyglutamate synthase, [Score=235, Expect=3e-70]} {Mouse: ENSMUSG00000009566, Fpgs, folylpolyglutamyl synthetase, [Score=230, Expect=2e-68]} {Dmel: FBgn0030407, CG2543, [Score=191, Expect=2e-54]} {Celegans: WBGene00017777, F25B5.6, Putative folylpolyglutamate synthase, [Score=201, Expect=8e-59]} {Smed: dd_Smed_v6_6956_0_1, dd_Smed_v6_6956_0_1, [Score=192, Expect=2e-55]} {RNA1509_18289} {RNA1310_13820} {RNA815_6991} |
| 10. | MligTC455_29845 | 129 | 2.69 | Mlig455_013268 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_013268 {REF} {Length: 7009} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=22.6]} {Smed: dd_Smed_v6_9908_0_3, dd_Smed_v6_9908_0_3, [Score=101, Expect=3e-25]} {RNA1509_13774} {RNA1310_8972.1} {RNA815_14204} |
Berezikov Lab - 2020-2021 © ERIBA