Data search


search
Exact
Search

Results for MligTC455_48334

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48334 3379 70.40 Mlig455_016007, Mlig455_016011

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.240

Region-enriched R4: 1.214/0.00484
Region-enriched R5: 1.156/0.00012

Regeneration-upregulated BL: 1.367

Regeneration-enriched BL: 1.367

STT3A

Mlig455_016007 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=490.4]; Dolichyl-phosphate-mannose-protein mannosyltransferase [PF13231.8, score=24.3]} {Human: ENSG00000134910, STT3A, STT3A, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1080, Expect=0.0]} {Mouse: ENSMUSG00000032116, Stt3a, STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae), [RH, Score=1077, Expect=0.0]} {Dmel: FBgn0031149, Stt3A, Catalytic subunit 3A of the oligosaccharyltransferase complex, [RH, Score=1066, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [Score=841, Expect=0.0]} {Smed: dd_Smed_v6_1174_0_1, dd_Smed_v6_1174_0_1, [RH, Score=1102, Expect=0.0]} {RNA1509_2426} {RNA1310_7279} {RNA815_3344}

Mlig455_016011 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=491.8]; Dolichyl-phosphate-mannose-protein mannosyltransferase [PF13231.8, score=24.2]} {Human: ENSG00000134910, STT3A, STT3A, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1081, Expect=0.0]} {Mouse: ENSMUSG00000032116, Stt3a, STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae), [RH, Score=1077, Expect=0.0]} {Dmel: FBgn0031149, Stt3A, Catalytic subunit 3A of the oligosaccharyltransferase complex, [RH, Score=1066, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [Score=841, Expect=0.0]} {Smed: dd_Smed_v6_1174_0_1, dd_Smed_v6_1174_0_1, [RH, Score=1103, Expect=0.0]} {RNA1509_2426} {RNA1310_7279, RNA1509_2426} {RNA1509_2426, RNA815_3344}

Cumulative graph for MligTC455_48334

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.679 6.346 0.38929 1.00000
RegionR2 -0.77 6.346 0.03164 0.20183
RegionR3 0.088 6.346 0.75579 1.00000
RegionR4 1.214 6.346 0.00038 0.00484
RegionR5 1.156 6.346 0.00000 0.00012
RegionR6 0.261 6.346 0.35437 0.93896
RegionR7 -0.066 6.346 0.84006 1.00000
RegionR8 -1.204 6.346 0.00598 0.14067

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.964 6.346 0.34120 1.00000
RegenerationR2 0.355 6.346 0.27603 0.72059
RegenerationR3 0.343 6.346 0.31621 0.74569
RegenerationR4 0.182 6.346 0.60923 0.91703
RegenerationR5 0.489 6.346 0.12629 0.53008
RegenerationR6 0.87 6.346 0.00811 0.11022
RegenerationBL 1.367 6.346 0.00002 0.00153 Specific for BL: 1.367
RegenerationTP 0.481 6.346 0.23081 0.67575


Genes with expression patterns similar to MligTC455_48334

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48334 3379 70.4 Mlig455_016007, Mlig455_016011

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.240

Region-enriched R4: 1.214/0.00484
Region-enriched R5: 1.156/0.00012

Regeneration-upregulated BL: 1.367

Regeneration-enriched BL: 1.367

STT3A 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_016007 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=490.4]; Dolichyl-phosphate-mannose-protein mannosyltransferase [PF13231.8, score=24.3]} {Human: ENSG00000134910, STT3A, STT3A, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1080, Expect=0.0]} {Mouse: ENSMUSG00000032116, Stt3a, STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae), [RH, Score=1077, Expect=0.0]} {Dmel: FBgn0031149, Stt3A, Catalytic subunit 3A of the oligosaccharyltransferase complex, [RH, Score=1066, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [Score=841, Expect=0.0]} {Smed: dd_Smed_v6_1174_0_1, dd_Smed_v6_1174_0_1, [RH, Score=1102, Expect=0.0]} {RNA1509_2426} {RNA1310_7279} {RNA815_3344}

Mlig455_016011 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=491.8]; Dolichyl-phosphate-mannose-protein mannosyltransferase [PF13231.8, score=24.2]} {Human: ENSG00000134910, STT3A, STT3A, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1081, Expect=0.0]} {Mouse: ENSMUSG00000032116, Stt3a, STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae), [RH, Score=1077, Expect=0.0]} {Dmel: FBgn0031149, Stt3A, Catalytic subunit 3A of the oligosaccharyltransferase complex, [RH, Score=1066, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [Score=841, Expect=0.0]} {Smed: dd_Smed_v6_1174_0_1, dd_Smed_v6_1174_0_1, [RH, Score=1103, Expect=0.0]} {RNA1509_2426} {RNA1310_7279, RNA1509_2426} {RNA1509_2426, RNA815_3344}
2. MligTC455_34335 663 13.81 Mlig455_056712

Neo: -

Age: -

Region-enriched R3: 1.005/0.04018

SLC27A1 2.664 - - 0.963 0.848 - 0.853 Mlig455_056712 {REF} {Length: 4873} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=249.3]; AMP-binding enzyme C-terminal domain [PF13193.8, score=37.0]} {Human: ENSG00000130304, SLC27A1, solute carrier family 27 member 1, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000059316, Slc27a4, solute carrier family 27 (fatty acid transporter), member 4, [RH, Score=602, Expect=0.0]; ENSMUSG00000031808, Slc27a1, solute carrier family 27 (fatty acid transporter), member 1, [RH, Score=596, Expect=0.0]} {Dmel: FBgn0265187, CG44252, [RH, Score=565, Expect=0.0]} {Celegans: WBGene00017012, acs-22, Fatty Acid CoA Synthetase family, [RH, Score=478, Expect=3e-161]} {Smed: dd_Smed_v6_4057_0_1, dd_Smed_v6_4057_0_1, [RH, Score=617, Expect=0.0]} {RNA1509_11133, RNA1509_25949, RNA1509_38088, RNA1509_45315, RNA1509_9470} {RNA1310_11936, RNA1509_11133, RNA1509_25949, RNA1509_38088, RNA1509_45315, RNA1509_9470} {RNA1509_11133, RNA1509_25949, RNA1509_38088, RNA1509_45315, RNA1509_9470, RNA815_4353}
3. MligTC455_03966 1012 21.07 Mlig455_033186

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.215

Region-enriched R5: 1.259/0.00071

NUTF2 2.599 0.759 - 0.951 0.889 - - Mlig455_033186 {REF} {Length: 1688} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=88.9]; Domain of unknown function (DUF4440) [PF14534.8, score=27.6]} {Human: ENSG00000102898, NUTF2, nuclear transport factor 2, [RH, Score=101, Expect=4e-28]} {Mouse: ENSMUSG00000071497, Nutf2-ps1, nuclear transport factor 2, pseudogene 1, [RH, Score=101, Expect=3e-28]; ENSMUSG00000008450, Nutf2, nuclear transport factor 2, [RH, Score=101, Expect=3e-28]} {Dmel: FBgn0032680, Ntf-2r, Nuclear transport factor-2-related, [RH, Score=102, Expect=7e-29]} {Smed: dd_Smed_v6_1606_0_1, dd_Smed_v6_1606_0_1, [RH, Score=138, Expect=2e-43]} {RNA1509_21207, RNA1509_9866} {RNA1310_23274, RNA1509_21207, RNA1509_9866} {RNA1509_21207, RNA1509_9866, RNA815_28192}
4. MligTC455_46994 686 14.29 Mlig455_013424

Neo: -

Age: logFC(26M/2M)=0.244

USB1 2.449 - - 0.774 0.952 - 0.723 Mlig455_013424 {REF} {Length: 2174} {TRANSSPLICED} {Pfam: Uncharacterised conserved protein [PF09749.11, score=129.4]} {Human: ENSG00000103005, USB1, U6 snRNA biogenesis phosphodiesterase 1, [RH, Score=114, Expect=5e-30]} {Mouse: ENSMUSG00000031792, Usb1, U6 snRNA biogenesis 1, [RH, Score=119, Expect=2e-32]} {Dmel: FBgn0037713, CG16790, [RH, Score=120, Expect=6e-33]} {RNA1509_15516, RNA1509_23851, RNA1509_29722} {RNA1310_12885.1, RNA1509_15516, RNA1509_23851, RNA1509_29722} {RNA1509_15516, RNA1509_23851, RNA1509_29722, RNA815_5897}
5. MligTC455_14558 332 6.93 Mlig455_069112

Neo: -

Age: Down-Up-Down

ETFRF1 1.753 - - - 0.972 - 0.781 Mlig455_069112 {REF} {Length: 2209} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=40.9]; Complex1_LYR-like [PF13233.8, score=27.6]} {Human: ENSG00000205707, ETFRF1, electron transfer flavoprotein regulatory factor 1, [RH, Score=98.2, Expect=1e-27]} {Mouse: ENSMUSG00000040370, Etfrf1, electron transfer flavoprotein regulatory factor 1, [RH, Score=119, Expect=5e-36]} {Dmel: FBgn0040985, CG6115, [RH, Score=75.5, Expect=4e-19]} {Celegans: WBGene00012780, Y42A5A.5, [RH, Score=115, Expect=8e-35]} {RNA1509_29278, RNA1509_31931, RNA1509_36282, RNA1509_51380} {RNA1310_65323, RNA1509_29278, RNA1509_31931, RNA1509_36282, RNA1509_51380} {RNA1509_29278, RNA1509_31931, RNA1509_36282, RNA1509_51380, RNA815_18968.1}
6. MligTC455_40426 1948 40.58 Mlig455_060322

Neo: -

Age: -

CERS1 1.746 0.793 - - - - 0.953 Mlig455_060322 {REF} {Length: 3135} {TRANSSPLICED} {Pfam: TLC domain [PF03798.18, score=117.1]} {Human: ENSG00000223802, CERS1, ceramide synthase 1, [RH, Score=211, Expect=2e-64]} {Mouse: ENSMUSG00000087408, Cers1, ceramide synthase 1, [RH, Score=218, Expect=1e-67]} {Dmel: FBgn0040918, schlank, [Score=79.7, Expect=5e-16]} {Celegans: WBGene00006505, lagr-1, Probable ceramide synthase lagr-1, [RH, Score=162, Expect=4e-46]} {Smed: dd_Smed_v6_3137_0_1, dd_Smed_v6_3137_0_1, [RH, Score=305, Expect=2e-101]} {RNA1509_13507, RNA1509_17195, RNA1509_43382, RNA1509_43716, RNA1509_47750, RNA1509_7808} {RNA1310_19552.1, RNA1509_13507, RNA1509_17195, RNA1509_43382, RNA1509_43716, RNA1509_47750, RNA1509_7808} {RNA1509_13507, RNA1509_17195, RNA1509_43382, RNA1509_43716, RNA1509_47750, RNA1509_7808, RNA815_8049.1}
7. MligTC455_35841 167 3.49 Mlig455_000106

Neo: -

Age: Down-Up-Up

Region-enriched R5: 2.181/0.00009

1.694 0.742 - 0.952 - - - Mlig455_000106 {REF} {Length: 1624} {TRANSSPLICED} {RNA1509_22542} {RNA1310_31942.2, RNA1509_22542} {RNA1509_22542, RNA815_21643}
8. MligTC455_39667 106 2.2 Mlig455_070895

Neo: Irradiation

Age: logFC(26M/2M)=0.457

Region-enriched R5: 2.946/0.01574

SH3RF3 1.689 - - 0.723 0.966 - - Mlig455_070895 {REF} {Length: 4013} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=25.1} {Pfam: Variant SH3 domain [PF14604.8, score=33.4]; Variant SH3 domain [PF07653.19, score=30.9]; SH3 domain [PF00018.30, score=28.4]} {Human: ENSG00000172985, SH3RF3, SH3 domain containing ring finger 3, [Score=51.2, Expect=6e-07]; ENSG00000154447, SH3RF1, SH3 domain containing ring finger 1, [Score=50.4, Expect=1e-06]} {Mouse: ENSMUSG00000037990, Sh3rf3, SH3 domain containing ring finger 3, [Score=50.4, Expect=7e-07]; ENSMUSG00000031642, Sh3rf1, SH3 domain containing ring finger 1, [Score=50.1, Expect=8e-07]; ENSMUSG00000057719, Sh3rf2, SH3 domain containing ring finger 2, [Score=49.3, Expect=1e-06]} {Smed: dd_Smed_v6_690_0_1, dd_Smed_v6_690_0_1, [Score=45.8, Expect=5e-06]} {RNA1509_40946, RNA1509_44397} {RNA1310_24585, RNA1509_44397} {RNA1509_44397, RNA815_5406}
9. MligTC455_49350 239 4.98 Mlig455_025344

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.147/0.02296

GGCT 1.673 - - 0.953 - - 0.720 Mlig455_025344 {REF} {Length: 2176} {Pfam: AIG2-like family [PF13772.8, score=86.4]; Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=24.7]} {Human: ENSG00000006625, GGCT, gamma-glutamylcyclotransferase, [Score=91.3, Expect=2e-22]} {Mouse: ENSMUSG00000002797, Ggct, gamma-glutamyl cyclotransferase, [Score=86.7, Expect=9e-21]} {Dmel: FBgn0052196, CG32196, [Score=83.6, Expect=1e-19]} {Celegans: WBGene00016629, C44B7.7, [Score=89.0, Expect=7e-22]} {Smed: dd_Smed_v6_6495_0_1, dd_Smed_v6_6495_0_1, [Score=119, Expect=9e-34]} {RNA1509_42530} {RNA1310_25089} {RNA815_20035}
10. MligTC455_47760 113 2.36 Mlig455_001689

Neo: -

Age: -

NT5C3A 1.662 - - 0.956 0.706 - - Mlig455_001689 {REF} {Length: 2401} {TRANSSPLICED} {Pfam: Pyrimidine 5'-nucleotidase (UMPH-1) [PF05822.14, score=255.3]; haloacid dehalogenase-like hydrolase [PF12710.9, score=26.5]} {Human: ENSG00000122643, NT5C3A, 5'-nucleotidase, cytosolic IIIA, [RH, Score=234, Expect=7e-74]} {Mouse: ENSMUSG00000029780, Nt5c3, 5'-nucleotidase, cytosolic III, [RH, Score=232, Expect=1e-73]} {Dmel: FBgn0034988, cN-IIIB, cytosolic 5'-nucleotidase IIIB, [RH, Score=184, Expect=4e-55]} {Celegans: WBGene00017775, F25B5.3, Putative cytosolic 5'-nucleotidase 3, [RH, Score=176, Expect=2e-51]} {Smed: dd_Smed_v6_3196_0_2, dd_Smed_v6_3196_0_2, [RH, Score=230, Expect=2e-72]} {RNA1509_39066} {RNA1310_20363} {RNA815_5383}
11. MligTC455_19588 554 11.55 Mlig455_042635

Neo: Neoblast, stringent

Age: Down-Up-Up

Region-enriched R5: 1.043/0.00768

POLE4 0.975 - - 0.975 - - - Mlig455_042635 {REF} {Length: 1186} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=58.5]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=44.6]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=28.2]; TATA box binding protein associated factor (TAF) [PF02969.19, score=19.1]} {Human: ENSG00000115350, POLE4, DNA polymerase epsilon 4, accessory subunit, [RH, Score=72.4, Expect=1e-16]} {Mouse: ENSMUSG00000030042, Pole4, polymerase (DNA-directed), epsilon 4 (p12 subunit), [RH, Score=74.3, Expect=1e-17]} {Dmel: FBgn0034726, Mes4, Mesoderm-expressed 4, [RH, Score=79.0, Expect=5e-19]} {Celegans: WBGene00013150, Y53F4B.3, [RH, Score=64.3, Expect=2e-13]} {RNA1509_11473} {RNA1310_28970} {RNA815_13355.1}
12. MligTC455_26835 1127 23.48 Mlig455_010954, Mlig455_033107, Mlig455_033135

Neo: -

Age: Down-Down-Up

0.972 - - - 0.972 - -

Mlig455_010954 {REF} {Length: 3832} {Pfam: Fibronectin type III domain [PF00041.23, score=20.8]} {RNA1509_13217} {RNA1310_2979.1} {RNA815_922.1}

Mlig455_033107 {REF} {Length: 3799} {Pfam: Immunoglobulin domain [PF13927.8, score=34.9]; Immunoglobulin I-set domain [PF07679.18, score=34.6]; Immunoglobulin domain [PF13895.8, score=31.0]; Immunoglobulin domain [PF00047.27, score=21.2]; Fibronectin type III domain [PF00041.23, score=21.0]} {RNA1509_13217} {RNA1310_2979.1, RNA1509_13217} {RNA1509_13217, RNA815_922.1}

Mlig455_033135 {REF} {Length: 3753} {Pfam: Immunoglobulin domain [PF13927.8, score=34.3]; Immunoglobulin I-set domain [PF07679.18, score=34.2]; Immunoglobulin domain [PF13895.8, score=30.9]; Fibronectin type III domain [PF00041.23, score=21.6]; Immunoglobulin domain [PF00047.27, score=20.3]} {RNA1509_13217} {RNA1310_2979.1} {RNA815_922.1}
13. MligTC455_36754 154 3.21 Mlig455_070325

Neo: -

Age: Down-Down-Up

Region-enriched R4: 3.037/0.00756
Region-enriched R5: 2.477/0.01015

ZNF91 0.961 - - 0.961 - - - Mlig455_070325 {REF} {Length: 3714} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=66.2]; C2H2-type zinc finger [PF13894.8, score=55.8]; Zinc-finger double domain [PF13465.8, score=48.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=31.0]; zinc-finger-containing domain [PF11672.10, score=19.1]} {Human: ENSG00000167232, ZNF91, zinc finger protein 91, [Score=103, Expect=5e-22]; ENSG00000196757, ZNF700, zinc finger protein 700, [Score=103, Expect=2e-22]} {Mouse: ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=109, Expect=2e-24]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=106, Expect=1e-23]} {Dmel: FBgn0038301, CG6654, [Score=75.5, Expect=8e-14]} {Celegans: WBGene00003380, mnm-2, Zinc finger protein mnm-2, [Score=76.3, Expect=3e-15]} {Smed: dd_Smed_v6_10911_0_1, dd_Smed_v6_10911_0_1, [Score=95.1, Expect=5e-20]} {RNA1509_18013} {RNA1310_5466.1} {RNA815_8226}
14. MligTC455_44338 719 14.98 Mlig455_041655

Neo: Irradiation

Age: -

Region-enriched R5: 2.104/0.00000

TECTB 0.96 - - 0.960 - - - Mlig455_041655 {REF} {Length: 2872} {TRANSSPLICED} {Pfam: Zona pellucida-like domain [PF00100.25, score=93.9]} {Human: ENSG00000119913, TECTB, tectorin beta, [RH, Score=50.4, Expect=4e-06]} {Mouse: ENSMUSG00000024979, Tectb, tectorin beta, [RH, Score=48.9, Expect=3e-06]} {RNA1509_39057, RNA1509_7245} {RNA1310_6151.1, RNA1509_39057, RNA1509_7245} {RNA1509_39057, RNA1509_7245, RNA815_1844}
15. MligTC455_19587 336 7 Mlig455_042592

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.602/0.00282

POLE4 0.959 - - 0.959 - - - Mlig455_042592 {REF} {Length: 1459} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=58.5]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=44.5]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=28.2]; TATA box binding protein associated factor (TAF) [PF02969.19, score=19.1]} {Human: ENSG00000115350, POLE4, DNA polymerase epsilon 4, accessory subunit, [RH, Score=72.8, Expect=1e-16]} {Mouse: ENSMUSG00000030042, Pole4, polymerase (DNA-directed), epsilon 4 (p12 subunit), [RH, Score=74.3, Expect=1e-17]} {Dmel: FBgn0034726, Mes4, Mesoderm-expressed 4, [RH, Score=79.0, Expect=5e-19]} {Celegans: WBGene00013150, Y53F4B.3, [RH, Score=64.3, Expect=2e-13]} {RNA1509_11473} {RNA1310_28970} {RNA815_13355.1}
16. MligTC455_22756 263 5.48 Mlig455_002661

Neo: -

Age: logFC(26M/2M)=0.225

0.953 - - 0.953 - - - Mlig455_002661 {REF} {Length: 3391} {TRANSSPLICED} {RNA1509_20135} {RNA1310_8897.1} {RNA815_3545}
17. MligTC455_49289 402 8.37 Mlig455_009864

Neo: Neoblast, stringent

Age: -

0.953 - - 0.953 - - - Mlig455_009864 {REF} {Length: 2032} {TRANSSPLICED} {RNA1509_12825, RNA1509_19362, RNA1509_60056} {RNA1310_24631, RNA1509_12825, RNA1509_19362, RNA1509_60056} {RNA1509_12825, RNA1509_19362, RNA1509_60056, RNA815_4319.3}
18. MligTC455_47581 612 12.74 Mlig455_050168

Neo: -

Age: -

Region-specific R5: 3.044

Region-enriched R5: 2.304/0.00003

C19orf12 0.952 - - 0.952 - - - Mlig455_050168 {REF} {Length: 762} {TRANSSPLICED} {Human: ENSG00000131943, C19orf12, chromosome 19 open reading frame 12, [RH, Score=71.6, Expect=3e-16]} {Mouse: ENSMUSG00000054676, 1600014C10Rik, RIKEN cDNA 1600014C10 gene, [RH, Score=82.4, Expect=1e-20]} {Dmel: FBgn0023530, CG3740, [RH, Score=69.3, Expect=1e-15]} {RNA1509_14124, RNA1509_19078, RNA1509_40112, RNA1509_54973} {RNA1310_48313.1, RNA1509_14124, RNA1509_19078, RNA1509_40112, RNA1509_54973} {RNA1509_14124, RNA1509_19078, RNA1509_40112, RNA1509_54973, RNA815_24031}
19. MligTC455_45515 5651 117.72 Mlig455_002150, Mlig455_002249

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.276

Regeneration-enriched BL: 1.266
Regeneration-enriched R6: 1.095

SRSF4 0.95 - - - - 0.950 -

Mlig455_002150 {REF} {Length: 1581} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=100.2]; RNA binding motif [PF08777.13, score=34.1]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [RH, Score=188, Expect=3e-57]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [RH, Score=190, Expect=4e-57]} {Dmel: FBgn0004587, B52, [RH, Score=180, Expect=1e-54]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [RH, Score=148, Expect=4e-43]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [RH, Score=183, Expect=2e-56]} {RNA1509_22914} {RNA1310_2260.1} {RNA815_2822}

Mlig455_002249 {REF} {Length: 1685} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=99.7]; RNA binding motif [PF08777.13, score=33.6]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [RH, Score=191, Expect=1e-57]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [RH, Score=194, Expect=8e-58]} {Dmel: FBgn0004587, B52, [RH, Score=181, Expect=1e-54]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [RH, Score=131, Expect=3e-36]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [RH, Score=185, Expect=2e-56]} {RNA1509_22914} {RNA1310_2260.1} {RNA815_2822}
20. MligTC455_48930 897 18.69 Mlig455_062351, Mlig455_062364, Mlig455_062383

Neo: -

Age: logFC(26M/2M)=-0.487

Regeneration-enriched BL: 1.778
Regeneration-enriched R6: 1.642

SNRPB2 0.95 - - - 0.950 - -

Mlig455_062351 {REF} {Length: 3624} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=74.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=37.4]} {Human: ENSG00000125870, SNRPB2, small nuclear ribonucleoprotein polypeptide B2, [Score=200, Expect=4e-64]; ENSG00000077312, SNRPA, small nuclear ribonucleoprotein polypeptide A, [Score=191, Expect=9e-60]} {Mouse: ENSMUSG00000008333, Snrpb2, U2 small nuclear ribonucleoprotein B, [Score=203, Expect=1e-65]} {Dmel: FBgn0003449, snf, sans fille, [Score=174, Expect=2e-54]} {Celegans: WBGene00004386, rnp-3, RNP (RRM RNA binding domain) containing, [Score=164, Expect=1e-50]} {Smed: dd_Smed_v6_2444_0_1, dd_Smed_v6_2444_0_1, [Score=196, Expect=6e-63]} {RNA1509_22935, RNA1509_25711} {RNA1310_2913, RNA1509_25711} {RNA1509_25711, RNA815_7310}

Mlig455_062364 {REF} {Length: 2011} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=74.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=37.4]} {Human: ENSG00000125870, SNRPB2, small nuclear ribonucleoprotein polypeptide B2, [Score=200, Expect=4e-64]; ENSG00000077312, SNRPA, small nuclear ribonucleoprotein polypeptide A, [Score=191, Expect=9e-60]} {Mouse: ENSMUSG00000008333, Snrpb2, U2 small nuclear ribonucleoprotein B, [Score=203, Expect=1e-65]} {Dmel: FBgn0003449, snf, sans fille, [Score=174, Expect=2e-54]} {Celegans: WBGene00004386, rnp-3, RNP (RRM RNA binding domain) containing, [Score=164, Expect=1e-50]} {Smed: dd_Smed_v6_2444_0_1, dd_Smed_v6_2444_0_1, [Score=196, Expect=6e-63]} {RNA1509_22935} {RNA1310_2913} {RNA815_7310}

Mlig455_062383 {REF} {Length: 2026} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=74.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=37.5]} {Human: ENSG00000125870, SNRPB2, small nuclear ribonucleoprotein polypeptide B2, [Score=202, Expect=5e-65]; ENSG00000077312, SNRPA, small nuclear ribonucleoprotein polypeptide A, [Score=192, Expect=5e-60]} {Mouse: ENSMUSG00000008333, Snrpb2, U2 small nuclear ribonucleoprotein B, [Score=206, Expect=1e-66]} {Dmel: FBgn0003449, snf, sans fille, [Score=175, Expect=9e-55]} {Celegans: WBGene00004386, rnp-3, RNP (RRM RNA binding domain) containing, [Score=164, Expect=1e-50]} {Smed: dd_Smed_v6_2444_0_1, dd_Smed_v6_2444_0_1, [Score=199, Expect=6e-64]} {RNA1509_22935, RNA1509_35461} {RNA1310_2913, RNA1509_35461} {RNA1509_35461, RNA815_7310}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA