TomoSeq data search

Data search

Results for MligTC455_36899

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36899

104

2.16

Mlig455_001582, Mlig455_001590, Mlig455_001593, Mlig455_053291, Mlig455_053305, Mlig455_053940

Neo: -

Age: Up-Down-Down

Mlig455_001582 {REF} {Length: 668} {NoTransDecoderORF} {RNA1509_51657} {RNA1310_25384} {RNA815_31249}

Mlig455_001590 {REF} {Length: 524} {RNA1509_51657} {RNA1310_49375} {RNA815_31249}

Mlig455_001593 {REF} {Length: 549} {NoTransDecoderORF} {RNA1509_51657} {RNA1310_25384} {RNA815_31249}

Mlig455_053291 {REF} {Length: 1527} {RNA1509_51657} {RNA1310_26692} {RNA815_38738}

Mlig455_053305 {REF} {Length: 111} {NoTransDecoderORF} {RNA1509_54652} {RNA1310_109560}

Mlig455_053940 {REF} {Length: 558} {NoTransDecoderORF} {RNA1509_51657} {RNA1310_71232} {RNA815_31249}

Cumulative graph for MligTC455_36899

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.755	1.972	0.51030	1.00000
RegionR2	0.516	1.972	0.67211	0.99974
RegionR3	1.22	1.972	0.30683	0.84655
RegionR4	2.086	1.972	0.12188	0.35020
RegionR5	2.125	1.972	0.04635	0.17759
RegionR6	1.533	1.972	0.20883	0.78555
RegionR7	-2.166	1.972	1.00000	1.00000
RegionR8	-1.559	1.972	0.99805	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.449	1.972	1.00000	1.00000
RegenerationR2	0.101	1.972	0.91105	1.00000
RegenerationR3	-0.001	1.972	0.98614	1.00000
RegenerationR4	-0.997	1.972	0.34960	0.78020
RegenerationR5	-0.368	1.972	0.69090	0.94823
RegenerationR6	-0.193	1.972	0.84960	1.00000
RegenerationBL	1.385	1.972	0.36317	0.73183
RegenerationTP	4.06	1.972	0.01292	0.19356

Genes with expression patterns similar to MligTC455_36899

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36899	104	2.16	Mlig455_001582, Mlig455_001590, Mlig455_001593, Mlig455_053291, Mlig455_053305, Mlig455_053940	Neo: - Age: Up-Down-Down		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001582 {REF} {Length: 668} {NoTransDecoderORF} {RNA1509_51657} {RNA1310_25384} {RNA815_31249} Mlig455_001590 {REF} {Length: 524} {RNA1509_51657} {RNA1310_49375} {RNA815_31249} Mlig455_001593 {REF} {Length: 549} {NoTransDecoderORF} {RNA1509_51657} {RNA1310_25384} {RNA815_31249} Mlig455_053291 {REF} {Length: 1527} {RNA1509_51657} {RNA1310_26692} {RNA815_38738} Mlig455_053305 {REF} {Length: 111} {NoTransDecoderORF} {RNA1509_54652} {RNA1310_109560} Mlig455_053940 {REF} {Length: 558} {NoTransDecoderORF} {RNA1509_51657} {RNA1310_71232} {RNA815_31249}
2.	MligTC455_42524	865	18.03	Mlig455_001409, Mlig455_064268	Neo: - Age: -		1.754	-	-	-	-	0.951	0.803	Mlig455_001409 {REF} {Length: 977} {Smed: dd_Smed_v6_391_0_1, dd_Smed_v6_391_0_1, [RH, Score=76.6, Expect=3e-20]} {RNA1509_31794} {RNA1310_45655, RNA1509_31794} {RNA1509_31794, RNA815_25121.1} Mlig455_064268 {REF} {Length: 1019} {Smed: dd_Smed_v6_391_0_1, dd_Smed_v6_391_0_1, [RH, Score=76.6, Expect=3e-20]} {RNA1509_31794} {RNA1310_45655} {RNA815_25121.1}
3.	MligTC455_41034	375	7.81	Mlig455_001164	Neo: - Age: Down-Up-Down		1.739	-	-	-	0.789	-	0.950	Mlig455_001164 {REF} {Length: 626} {NoTransDecoderORF} {RNA1509_40889} {RNA1310_48760, RNA1509_40889} {RNA1509_40889, RNA815_36110.2}
4.	MligTC455_20628	439	9.14	Mlig455_058160, Mlig455_058225, Mlig455_058231	Neo: - Age: -		1.697	-	-	-	0.734	0.963	-	Mlig455_058160 {REF} {Length: 3431} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=4e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=201, Expect=2e-58]} {RNA1509_19499} {RNA1310_13236.1} {RNA815_4665} Mlig455_058225 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=7e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=202, Expect=1e-58]} {RNA1509_19499} {RNA1310_13236.1, RNA1509_19499} {RNA1509_19499, RNA815_4665} Mlig455_058231 {REF} {Length: 2506} {TRANSSPLICED} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=7e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=202, Expect=1e-58]} {RNA1509_19499} {RNA1310_13236.2} {RNA815_4665}
5.	MligTC455_23735	1283	26.72	Mlig455_037974	Neo: - Age: logFC(26M/2M)=0.565	YWHAZ	0.97	-	-	-	-	0.970	-	Mlig455_037974 {REF} {Length: 2082} {Pfam: 14-3-3 protein [PF00244.22, score=542.5]} {Human: ENSG00000164924, YWHAZ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta, [RH, Score=339, Expect=3e-116]; ENSG00000134308, YWHAQ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, [RH, Score=333, Expect=5e-114]} {Mouse: ENSMUSG00000022285, Ywhaz, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, [RH, Score=338, Expect=3e-116]; ENSMUSG00000076432, Ywhaq, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, [RH, Score=333, Expect=4e-114]} {Dmel: FBgn0004907, 14-3-3zeta, [Score=340, Expect=5e-117]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [RH, Score=340, Expect=6e-117]} {Smed: dd_Smed_v6_5419_0_1, dd_Smed_v6_5419_0_1, [RH, Score=348, Expect=4e-120]} {RNA1509_55614} {RNA1310_9959} {RNA815_12064}
6.	MligTC455_23734	1421	29.6	Mlig455_015558	Neo: - Age: logFC(26M/2M)=-1.225	YWHAG	0.966	-	-	-	-	0.966	-	Mlig455_015558 {REF} {Length: 1646} {TRANSSPLICED} {Pfam: 14-3-3 protein [PF00244.22, score=216.2]} {Human: ENSG00000170027, YWHAG, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma, [Score=197, Expect=1e-63]; ENSG00000274474, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [Score=196, Expect=4e-63]; ENSG00000108953, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [Score=196, Expect=4e-63]; ENSG00000164924, YWHAZ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta, [Score=194, Expect=1e-63]; ENSG00000128245, YWHAH, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta, [Score=192, Expect=1e-61]; ENSG00000134308, YWHAQ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, [Score=192, Expect=8e-62]; ENSG00000166913, YWHAB, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta, [Score=192, Expect=1e-61]} {Mouse: ENSMUSG00000051391, Ywhag, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide, [Score=197, Expect=9e-64]; ENSMUSG00000020849, Ywhae, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide, [Score=195, Expect=7e-63]; ENSMUSG00000018326, Ywhab, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide, [Score=194, Expect=9e-63]; ENSMUSG00000022285, Ywhaz, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, [Score=193, Expect=3e-62]; ENSMUSG00000076432, Ywhaq, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, [Score=191, Expect=2e-61]; ENSMUSG00000018965, Ywhah, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide, [Score=191, Expect=2e-61]} {Dmel: FBgn0004907, 14-3-3zeta, [Score=204, Expect=1e-66]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [Score=202, Expect=8e-66]} {Smed: dd_Smed_v6_5419_0_1, dd_Smed_v6_5419_0_1, [Score=207, Expect=1e-67]} {RNA1509_8237} {RNA1310_9959} {RNA815_12064}
7.	MligTC455_19812	192	3.99	Mlig455_017616	Neo: - Age: -		0.962	-	-	-	0.962	-	-	Mlig455_017616 {REF} {Length: 579} {TRANSSPLICED} {RNA1509_45712} {RNA1310_38057.2} {RNA815_23034.1}
8.	MligTC455_22919	343	7.15	Mlig455_039379	Neo: - Age: Up-Down-Down	TRPC5	0.956	-	-	-	-	-	0.956	Mlig455_039379 {REF} {Length: 4064} {Pfam: Transient receptor ion channel II [PF08344.13, score=97.5]; Ion transport protein [PF00520.33, score=92.8]; Polycystin cation channel [PF08016.14, score=46.0]; Ankyrin repeats (many copies) [PF13637.8, score=25.5]; Ankyrin repeats (3 copies) [PF12796.9, score=24.1]} {Human: ENSG00000072315, TRPC5, transient receptor potential cation channel subfamily C member 5, [RH, Score=747, Expect=0.0]; ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [RH, Score=738, Expect=0.0]} {Mouse: ENSMUSG00000041710, Trpc5, transient receptor potential cation channel, subfamily C, member 5, [RH, Score=749, Expect=0.0]; ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [RH, Score=853, Expect=0.0]} {Celegans: WBGene00006615, trp-2, TRP (Transient receptor potential) channel family; TRP homlogous cation channel protein, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_20495_0_1, dd_Smed_v6_20495_0_1, [RH, Score=1006, Expect=0.0]} {RNA1509_26602, RNA1509_34758} {RNA1310_2133, RNA1509_26602, RNA1509_34758} {RNA1509_26602, RNA1509_34758, RNA815_924}
9.	MligTC455_38088	1056	22.01	Mlig455_058088	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_058088 {REF} {Length: 288} {NoTransDecoderORF} {RNA1310_136772.2}
10.	MligTC455_49639	6233	129.85	Mlig455_022526, Mlig455_022566	Neo: - Age: - Region-enriched R7: 4.041/0.00000 Region-enriched R8: 2.616/0.00002 Regeneration-downregulated BL: -3.756 Regeneration-depleted BL: -3.756		0.955	-	-	-	-	0.955	-	Mlig455_022526 {REF} {Length: 493} {TRANSSPLICED} {RNA1509_5516} {RNA1310_67929} {RNA815_34597} Mlig455_022566 {REF} {Length: 494} {TRANSSPLICED} {RNA1509_5516} {RNA1310_67929, RNA1509_5516} {RNA1509_5516, RNA815_34597}
11.	MligTC455_52670	280	5.84	Mlig455_060776	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.342	DHRS7B	0.954	-	-	-	0.954	-	-	Mlig455_060776 {REF} {Length: 1638} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=124.6]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=90.9]; KR domain [PF08659.12, score=35.4]} {Human: ENSG00000109016, DHRS7B, dehydrogenase/reductase 7B, [RH, Score=192, Expect=1e-58]} {Mouse: ENSMUSG00000042569, Dhrs7b, dehydrogenase/reductase (SDR family) member 7B, [RH, Score=196, Expect=1e-60]} {Dmel: FBgn0027583, CG7601, [RH, Score=207, Expect=1e-64]} {Celegans: WBGene00000993, dhs-30, DeHydrogenases, Short chain, [RH, Score=170, Expect=1e-50]} {Smed: dd_Smed_v6_3512_0_1, dd_Smed_v6_3512_0_1, [RH, Score=191, Expect=1e-58]} {RNA1509_32832, RNA1509_37672} {RNA1310_19773, RNA1509_32832, RNA1509_37672} {RNA1509_32832, RNA1509_37672, RNA815_14850}
12.	MligTC455_20385	320	6.67	Mlig455_026192	Neo: - Age: - Region-enriched R8: 3.215/0.01738 Region-enriched R7: 2.779/0.00840		0.953	-	-	-	-	0.953	-	Mlig455_026192 {REF} {Length: 6207} {Smed: dd_Smed_v6_14319_0_1, dd_Smed_v6_14319_0_1, [RH, Score=79.0, Expect=1e-16]} {RNA1509_51615} {RNA1310_6888, RNA1509_51615} {RNA1509_51615, RNA815_13531.1}
13.	MligTC455_52757	53	1.11	Mlig455_014134	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_014134 {REF} {Length: 2186} {RNA1310_5100.1} {RNA815_36967}
14.	MligTC455_40990	33	0.69	Mlig455_028229	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_028229 {REF} {Length: 910} {NoTransDecoderORF} {RNA1509_31256} {RNA1310_2177} {RNA815_2763.1}

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