TomoSeq data search

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Results for MligTC455_37082

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37082

72

1.50

Mlig455_019298, Mlig455_019518

Neo: -

Age: -

RCBTB1

Mlig455_019298 {REF} {Length: 4230} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=197.1]; Ankyrin repeats (many copies) [PF13637.8, score=150.2]; Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=148.3]; Ankyrin repeat [PF00023.32, score=140.7]; Ankyrin repeat [PF13606.8, score=126.3]; Ankyrin repeats (many copies) [PF13857.8, score=108.3]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=71.0]; BTB/POZ domain [PF00651.33, score=66.0]} {Human: ENSG00000136144, RCBTB1, RCC1 and BTB domain containing protein 1, [RH, Score=447, Expect=9e-146]; ENSG00000136161, RCBTB2, RCC1 and BTB domain containing protein 2, [RH, Score=428, Expect=2e-138]} {Mouse: ENSMUSG00000035469, Rcbtb1, regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1, [RH, Score=453, Expect=2e-148]; ENSMUSG00000022106, Rcbtb2, regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2, [RH, Score=436, Expect=3e-141]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=189, Expect=3e-48]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=178, Expect=5e-45]} {Smed: dd_Smed_v6_6898_0_1, dd_Smed_v6_6898_0_1, [Score=166, Expect=3e-42]} {RNA1509_46037} {RNA1310_5158.1} {RNA815_6143}

Mlig455_019518 {REF} {Length: 4053} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=198.9]; Ankyrin repeats (many copies) [PF13637.8, score=153.0]; Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=148.4]; Ankyrin repeat [PF00023.32, score=140.6]; Ankyrin repeat [PF13606.8, score=126.9]; Ankyrin repeats (many copies) [PF13857.8, score=108.4]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=71.4]; BTB/POZ domain [PF00651.33, score=66.0]} {Human: ENSG00000136144, RCBTB1, RCC1 and BTB domain containing protein 1, [RH, Score=445, Expect=4e-145]; ENSG00000136161, RCBTB2, RCC1 and BTB domain containing protein 2, [RH, Score=428, Expect=2e-138]} {Mouse: ENSMUSG00000035469, Rcbtb1, regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1, [RH, Score=451, Expect=1e-147]; ENSMUSG00000022106, Rcbtb2, regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2, [RH, Score=435, Expect=2e-141]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=187, Expect=1e-47]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=178, Expect=5e-45]} {Smed: dd_Smed_v6_6898_0_1, dd_Smed_v6_6898_0_1, [Score=166, Expect=3e-42]} {RNA1509_46037} {RNA1310_5158.1} {RNA815_6143}

Cumulative graph for MligTC455_37082

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.93	1.706	1.00000	1.00000
RegionR2	1.582	1.706	0.29079	0.67927
RegionR3	2.635	1.706	0.01276	0.17894
RegionR4	-1.585	1.706	0.97092	1.00000
RegionR5	-1.139	1.706	0.94559	1.00000
RegionR6	2.617	1.706	0.01968	0.25229
RegionR7	2.996	1.706	0.03454	0.35369
RegionR8	-3.176	1.706	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.535	1.706	0.99979	1.00000
RegenerationR2	1.873	1.706	0.08232	0.46165
RegenerationR3	0.693	1.706	0.46532	0.84126
RegenerationR4	3.468	1.706	0.00676	0.11910
RegenerationR5	1.749	1.706	0.11845	0.51677
RegenerationR6	-0.549	1.706	0.73270	0.94243
RegenerationBL	0.427	1.706	0.74436	1.00000
RegenerationTP	3.782	1.706	0.05173	0.37249

Genes with expression patterns similar to MligTC455_37082

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37082	72	1.5	Mlig455_019298, Mlig455_019518	Neo: - Age: -	RCBTB1	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_019298 {REF} {Length: 4230} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=197.1]; Ankyrin repeats (many copies) [PF13637.8, score=150.2]; Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=148.3]; Ankyrin repeat [PF00023.32, score=140.7]; Ankyrin repeat [PF13606.8, score=126.3]; Ankyrin repeats (many copies) [PF13857.8, score=108.3]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=71.0]; BTB/POZ domain [PF00651.33, score=66.0]} {Human: ENSG00000136144, RCBTB1, RCC1 and BTB domain containing protein 1, [RH, Score=447, Expect=9e-146]; ENSG00000136161, RCBTB2, RCC1 and BTB domain containing protein 2, [RH, Score=428, Expect=2e-138]} {Mouse: ENSMUSG00000035469, Rcbtb1, regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1, [RH, Score=453, Expect=2e-148]; ENSMUSG00000022106, Rcbtb2, regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2, [RH, Score=436, Expect=3e-141]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=189, Expect=3e-48]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=178, Expect=5e-45]} {Smed: dd_Smed_v6_6898_0_1, dd_Smed_v6_6898_0_1, [Score=166, Expect=3e-42]} {RNA1509_46037} {RNA1310_5158.1} {RNA815_6143} Mlig455_019518 {REF} {Length: 4053} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=198.9]; Ankyrin repeats (many copies) [PF13637.8, score=153.0]; Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=148.4]; Ankyrin repeat [PF00023.32, score=140.6]; Ankyrin repeat [PF13606.8, score=126.9]; Ankyrin repeats (many copies) [PF13857.8, score=108.4]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=71.4]; BTB/POZ domain [PF00651.33, score=66.0]} {Human: ENSG00000136144, RCBTB1, RCC1 and BTB domain containing protein 1, [RH, Score=445, Expect=4e-145]; ENSG00000136161, RCBTB2, RCC1 and BTB domain containing protein 2, [RH, Score=428, Expect=2e-138]} {Mouse: ENSMUSG00000035469, Rcbtb1, regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1, [RH, Score=451, Expect=1e-147]; ENSMUSG00000022106, Rcbtb2, regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2, [RH, Score=435, Expect=2e-141]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=187, Expect=1e-47]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=178, Expect=5e-45]} {Smed: dd_Smed_v6_6898_0_1, dd_Smed_v6_6898_0_1, [Score=166, Expect=3e-42]} {RNA1509_46037} {RNA1310_5158.1} {RNA815_6143}
2.	MligTC455_22923	53	1.1	Mlig455_068434	Neo: - Age: Down-Up-Down	MYLK3	0.971	-	-	-	-	-	0.971	Mlig455_068434 {REF} {Length: 2249} {Pfam: Protein kinase domain [PF00069.27, score=28.7]} {Human: ENSG00000140795, MYLK3, myosin light chain kinase 3, [Score=49.7, Expect=1e-07]} {Mouse: ENSMUSG00000031698, Mylk3, myosin light chain kinase 3, [Score=49.7, Expect=9e-08]} {Dmel: FBgn0265045, Strn-Mlck, Stretchin-Mlck, [Score=48.5, Expect=1e-07]} {Smed: dd_Smed_v6_8041_0_1, dd_Smed_v6_8041_0_1, [Score=49.3, Expect=4e-08]} {RNA1509_36787} {RNA1310_62109} {RNA815_9443}
3.	MligTC455_12782	51	1.07	Mlig455_012991	Neo: - Age: -		0.968	-	-	-	-	-	0.968	Mlig455_012991 {REF} {Length: 1473} {TRANSSPLICED} {RNA1509_56473} {RNA1310_22716.1, RNA1509_56473} {RNA1509_56473, RNA815_10095.1}
4.	MligTC455_32960	109	2.26	Mlig455_030872	Neo: - Age: Down-Up-Down	ELF4	0.968	-	-	-	-	0.968	-	Mlig455_030872 {REF} {Length: 4696} {Pfam: Ets-domain [PF00178.24, score=50.8]} {Human: ENSG00000102034, ELF4, E74 like ETS transcription factor 4, [Score=59.7, Expect=3e-08]; ENSG00000109381, ELF2, E74 like ETS transcription factor 2, [Score=57.8, Expect=9e-08]} {Mouse: ENSMUSG00000037174, Elf2, E74-like factor 2, [Score=60.8, Expect=7e-09]; ENSMUSG00000031103, Elf4, E74-like factor 4 (ets domain transcription factor), [Score=58.2, Expect=6e-08]} {Smed: dd_Smed_v6_7247_0_1, dd_Smed_v6_7247_0_1, [RH, Score=70.1, Expect=1e-12]} {RNA1509_17091} {RNA1310_1652} {RNA815_1367}
5.	MligTC455_00722	98	2.04	Mlig455_029527	Neo: - Age: -		0.967	-	-	-	-	-	0.967	Mlig455_029527 {REF} {Length: 63} {NoTransDecoderORF}
6.	MligTC455_19450	194	4.05	Mlig455_065775, Mlig455_065798	Neo: - Age: -		0.964	-	-	-	0.964	-	-	Mlig455_065775 {REF} {Length: 1864} {Pfam: Innexin [PF00876.20, score=26.9]} {RNA1509_47060} {RNA1310_19756.1} {RNA815_16217} Mlig455_065798 {REF} {Length: 1809} {Pfam: Innexin [PF00876.20, score=26.9]} {RNA1509_47060} {RNA1310_19756.1} {RNA815_16217}
7.	MligTC455_10585	40	0.84	Mlig455_050448	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_050448 {REF} {Length: 296} {NoTransDecoderORF}
8.	MligTC455_47935	681	14.18	Mlig455_010692, Mlig455_010792	Neo: Germline Age: Up-Down-Down Region-specific R4: 4.420 Region-enriched R4: 3.183/0.00000	AGBL1, AGTPBP1	0.959	-	-	-	-	0.959	-	Mlig455_010692 {REF} {Length: 4509} {TRANSSPLICED} {Pfam: Cytosolic carboxypeptidase N-terminal domain [PF18027.3, score=51.9]; Zinc carboxypeptidase [PF00246.26, score=48.0]} {Human: ENSG00000273540, AGBL1, ATP/GTP binding protein like 1, [RH, Score=462, Expect=2e-149]} {Mouse: ENSMUSG00000021557, Agtpbp1, ATP/GTP binding protein 1, [RH, Score=475, Expect=1e-153]; ENSMUSG00000025754, Agbl1, ATP/GTP binding protein-like 1, [RH, Score=468, Expect=1e-151]} {Dmel: FBgn0265726, Nna1, Nna1 carboxypeptidase, [Score=288, Expect=3e-87]} {Celegans: WBGene00018995, ccpp-1, Cytosolic carboxypeptidase 1, [RH, Score=333, Expect=3e-102]} {Smed: dd_Smed_v6_11728_0_1, dd_Smed_v6_11728_0_1, [RH, Score=468, Expect=2e-149]} {RNA1509_7574} {RNA1310_1793.1} {RNA815_13708} Mlig455_010792 {REF} {Length: 4427} {TRANSSPLICED} {Pfam: Cytosolic carboxypeptidase N-terminal domain [PF18027.3, score=50.5]; Zinc carboxypeptidase [PF00246.26, score=44.1]} {Human: ENSG00000135049, AGTPBP1, ATP/GTP binding protein 1, [RH, Score=500, Expect=3e-156]; ENSG00000273540, AGBL1, ATP/GTP binding protein like 1, [RH, Score=482, Expect=3e-150]} {Mouse: ENSMUSG00000021557, Agtpbp1, ATP/GTP binding protein 1, [RH, Score=497, Expect=2e-155]; ENSMUSG00000025754, Agbl1, ATP/GTP binding protein-like 1, [RH, Score=484, Expect=2e-151]} {Dmel: FBgn0265726, Nna1, Nna1 carboxypeptidase, [Score=287, Expect=8e-83]} {Celegans: WBGene00018995, ccpp-1, Cytosolic carboxypeptidase 1, [RH, Score=340, Expect=2e-99]} {Smed: dd_Smed_v6_11728_0_1, dd_Smed_v6_11728_0_1, [RH, Score=477, Expect=6e-146]} {RNA1509_22080, RNA1509_34305, RNA1509_7574} {RNA1310_1793.1, RNA1509_22080, RNA1509_34305, RNA1509_7574} {RNA1509_22080, RNA1509_34305, RNA1509_7574, RNA815_13708}
9.	MligTC455_52790	69	1.44	Mlig455_031435	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.468	KY	0.959	-	-	-	-	-	0.959	Mlig455_031435 {REF} {Length: 2924} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=54.4]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [RH, Score=190, Expect=2e-51]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [RH, Score=190, Expect=2e-51]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=97.4, Expect=1e-20]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=96.3, Expect=8e-21]} {Smed: dd_Smed_v6_1109_0_1, dd_Smed_v6_1109_0_1, [Score=139, Expect=7e-34]} {RNA1509_41238} {RNA1310_9626} {RNA815_5945}
10.	MligTC455_26032	37	0.77	Mlig455_019896	Neo: - Age: logFC(26M/2M)=1.807	COQ9	0.958	-	-	-	-	0.958	-	Mlig455_019896 {REF} {Length: 1704} {TRANSSPLICED} {Pfam: COQ9 [PF08511.13, score=92.0]} {Human: ENSG00000088682, COQ9, coenzyme Q9, [RH, Score=123, Expect=6e-33]} {Mouse: ENSMUSG00000031782, Coq9, coenzyme Q9, [RH, Score=120, Expect=6e-32]} {Dmel: FBgn0050493, CG30493, [RH, Score=130, Expect=9e-36]} {Smed: dd_Smed_v6_4927_0_1, dd_Smed_v6_4927_0_1, [RH, Score=114, Expect=1e-30]} {RNA1509_11041} {RNA1310_32994} {RNA815_19703}
11.	MligTC455_30454	39	0.82	Mlig455_022994	Neo: - Age: Down-Up-Down, logFC(26M/2M)=2.562		0.958	-	-	-	-	-	0.958	Mlig455_022994 {REF} {Length: 1336} {Pfam: Phage integrase family [PF00589.24, score=23.1]} {RNA1509_25737} {RNA1310_2048} {RNA815_551.1}
12.	MligTC455_17306	46	0.96	Mlig455_048362	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_048362 {REF} {Length: 1018} {RNA1509_31170} {RNA1310_11842} {RNA815_2791.1}
13.	MligTC455_43448	71	1.49	Mlig455_003393	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_003393 {REF} {Length: 1919} {NoTransDecoderORF} {RNA1509_1651} {RNA1310_75407} {RNA815_43971}
14.	MligTC455_21433	44	0.92	Mlig455_016479	Neo: Germline Age: - Region-enriched R4: 3.381/0.02270		0.953	-	-	-	-	0.953	-	Mlig455_016479 {REF} {Length: 1912} {RNA1509_59114} {RNA1310_21929.1} {RNA815_18147}
15.	MligTC455_25197	36	0.74	Mlig455_059562	Neo: - Age: -	KY	0.953	-	-	-	-	-	0.953	Mlig455_059562 {REF} {Length: 5559} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=79.0, Expect=2e-14]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=78.6, Expect=3e-14]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=68.2, Expect=3e-11]} {Smed: dd_Smed_v6_1109_0_1, dd_Smed_v6_1109_0_1, [Score=100, Expect=5e-21]} {RNA1509_6021} {RNA1310_875.1} {RNA815_349}
16.	MligTC455_39707	209	4.34	Mlig455_038773	Neo: - Age: logFC(26M/2M)=-0.298	ANKRD17	0.952	-	-	-	-	-	0.952	Mlig455_038773 {REF} {Length: 3788} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=96.6]; Ankyrin repeats (many copies) [PF13637.8, score=85.3]; Ankyrin repeats (many copies) [PF13857.8, score=60.3]; Ankyrin repeat [PF00023.32, score=53.1]; Ankyrin repeat [PF13606.8, score=47.0]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=59.7, Expect=2e-08]; ENSG00000145362, ANK2, ankyrin 2, [Score=57.0, Expect=1e-07]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=55.8, Expect=2e-07]; ENSMUSG00000024483, Ankhd1, ankyrin repeat and KH domain containing 1, [Score=54.7, Expect=5e-07]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=63.2, Expect=8e-10]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=49.3, Expect=1e-05]} {Smed: dd_Smed_v6_10939_0_1, dd_Smed_v6_10939_0_1, [Score=57.0, Expect=2e-08]} {RNA1509_19518} {RNA1310_535.1} {RNA815_1832}
17.	MligTC455_15110	44	0.91	Mlig455_047180	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.335		0.951	-	-	-	-	0.951	-	Mlig455_047180 {REF} {Length: 3150} {RNA1509_12062, RNA1509_1568, RNA1509_8241} {RNA1310_6375.1, RNA1509_12062, RNA1509_1568, RNA1509_8241} {RNA1509_12062, RNA1509_1568, RNA1509_8241, RNA815_2043}
18.	MligTC455_13960	17	0.35	Mlig455_007007	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_007007 {REF} {Length: 1560} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_2913} {RNA1310_62643} {RNA815_420.1}

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