Data search


search
Exact
Search

Results for MligTC455_37137

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37137 20036 417.41 Mlig455_023454

Neo: -

Age: -

CYCS Mlig455_023454 {REF} {Length: 912} {TRANSSPLICED} {Pfam: Cytochrome c [PF00034.23, score=49.1]; Cytochrome C oxidase, cbb3-type, subunit III [PF13442.8, score=31.2]} {Human: ENSG00000172115, CYCS, cytochrome c, somatic, [RH, Score=176, Expect=1e-58]} {Mouse: ENSMUSG00000063694, Cycs, cytochrome c, somatic, [RH, Score=182, Expect=5e-61]; ENSMUSG00000058927, Gm10053, predicted gene 10053, [RH, Score=182, Expect=5e-61]} {Dmel: FBgn0284248, Cyt-c-p, Cytochrome c proximal, [RH, Score=181, Expect=7e-61]} {Celegans: WBGene00017121, cyc-2.1, Cytochrome c 2.1, [RH, Score=145, Expect=1e-46]} {Smed: dd_Smed_v6_464_0_1, dd_Smed_v6_464_0_1, [RH, Score=189, Expect=3e-64]} {RNA1509_708} {RNA1310_9255} {RNA815_18199.1}

Cumulative graph for MligTC455_37137

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.59 8.766 0.06803 0.58776
RegionR2 -0.563 8.766 0.02604 0.18107
RegionR3 0.345 8.766 0.10476 0.56602
RegionR4 0.593 8.766 0.01107 0.06591
RegionR5 0.724 8.766 0.00036 0.00454
RegionR6 0.59 8.766 0.00498 0.10813
RegionR7 -0.508 8.766 0.02841 0.31894
RegionR8 -0.589 8.766 0.02117 0.28352

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.236 8.766 0.55016 1.00000
RegenerationR2 -0.34 8.766 0.22038 0.66773
RegenerationR3 -0.469 8.766 0.09417 0.49346
RegenerationR4 -0.029 8.766 0.91837 1.00000
RegenerationR5 0.023 8.766 0.93502 1.00000
RegenerationR6 -0.442 8.766 0.11306 0.41435
RegenerationBL 0.239 8.766 0.32050 0.68756
RegenerationTP 0.2 8.766 0.44691 0.86538


Genes with expression patterns similar to MligTC455_37137

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37137 20036 417.41 Mlig455_023454

Neo: -

Age: -

CYCS 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_023454 {REF} {Length: 912} {TRANSSPLICED} {Pfam: Cytochrome c [PF00034.23, score=49.1]; Cytochrome C oxidase, cbb3-type, subunit III [PF13442.8, score=31.2]} {Human: ENSG00000172115, CYCS, cytochrome c, somatic, [RH, Score=176, Expect=1e-58]} {Mouse: ENSMUSG00000063694, Cycs, cytochrome c, somatic, [RH, Score=182, Expect=5e-61]; ENSMUSG00000058927, Gm10053, predicted gene 10053, [RH, Score=182, Expect=5e-61]} {Dmel: FBgn0284248, Cyt-c-p, Cytochrome c proximal, [RH, Score=181, Expect=7e-61]} {Celegans: WBGene00017121, cyc-2.1, Cytochrome c 2.1, [RH, Score=145, Expect=1e-46]} {Smed: dd_Smed_v6_464_0_1, dd_Smed_v6_464_0_1, [RH, Score=189, Expect=3e-64]} {RNA1509_708} {RNA1310_9255} {RNA815_18199.1}
2. MligTC455_28307 3281 68.36 Mlig455_038439

Neo: -

Age: Down-Up-Down

DBI 2.627 0.817 0.833 - 0.977 - - Mlig455_038439 {REF} {Length: 761} {Pfam: Acyl CoA binding protein [PF00887.21, score=97.1]} {Human: ENSG00000155368, DBI, diazepam binding inhibitor, acyl-CoA binding protein, [RH, Score=112, Expect=5e-34]; ENSG00000176244, ACBD7, acyl-CoA binding domain containing 7, [RH, Score=108, Expect=4e-32]} {Mouse: ENSMUSG00000026385, Dbi, diazepam binding inhibitor, [RH, Score=112, Expect=5e-34]; ENSMUSG00000026644, Acbd7, acyl-Coenzyme A binding domain containing 7, [RH, Score=107, Expect=8e-32]} {Dmel: FBgn0031992, CG8498, [RH, Score=108, Expect=2e-32]} {Celegans: WBGene00016655, acbp-1, Acyl-CoA-binding protein homolog 1, [RH, Score=99.8, Expect=3e-29]} {Smed: dd_Smed_v6_160_0_1, dd_Smed_v6_160_0_1, [RH, Score=109, Expect=4e-33]} {RNA1509_9262} {RNA1310_56339.1} {RNA815_27976}
3. MligTC455_37136 5093 106.1 Mlig455_023430

Neo: -

Age: -

Region-enriched R5: 1.318/0.00179

CYCS 2.543 0.738 - - 0.980 - 0.825 Mlig455_023430 {REF} {Length: 909} {TRANSSPLICED} {Pfam: Cytochrome c [PF00034.23, score=49.1]; Cytochrome C oxidase, cbb3-type, subunit III [PF13442.8, score=31.2]} {Human: ENSG00000172115, CYCS, cytochrome c, somatic, [RH, Score=176, Expect=1e-58]} {Mouse: ENSMUSG00000063694, Cycs, cytochrome c, somatic, [RH, Score=182, Expect=5e-61]; ENSMUSG00000058927, Gm10053, predicted gene 10053, [RH, Score=182, Expect=5e-61]} {Dmel: FBgn0284248, Cyt-c-p, Cytochrome c proximal, [RH, Score=181, Expect=7e-61]} {Celegans: WBGene00017121, cyc-2.1, Cytochrome c 2.1, [RH, Score=145, Expect=1e-46]} {Smed: dd_Smed_v6_464_0_1, dd_Smed_v6_464_0_1, [RH, Score=189, Expect=3e-64]} {RNA1509_1111, RNA1509_19623, RNA1509_57700, RNA1509_708, RNA1509_7209} {RNA1310_9255, RNA1509_1111, RNA1509_19623, RNA1509_57700, RNA1509_708, RNA1509_7209} {RNA1509_1111, RNA1509_19623, RNA1509_57700, RNA1509_708, RNA1509_7209, RNA815_18199.1}
4. MligTC455_51986 9652 201.08 Mlig455_026760

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.222

Region-enriched R4: 1.452/0.00000

UQCRB 2.428 - 0.712 - 0.762 - 0.954 Mlig455_026760 {REF} {Length: 1767} {TRANSSPLICED} {Pfam: Ubiquinol-cytochrome C reductase complex 14kD subunit [PF02271.18, score=66.8]} {Human: ENSG00000156467, UQCRB, ubiquinol-cytochrome c reductase binding protein, [RH, Score=47.4, Expect=3e-07]} {Mouse: ENSMUSG00000021520, Uqcrb, ubiquinol-cytochrome c reductase binding protein, [RH, Score=50.8, Expect=1e-08]} {Dmel: FBgn0039576, UQCR-14L, Ubiquinol-cytochrome c reductase 14 kDa subunit-like, [RH, Score=43.9, Expect=2e-06]} {Smed: dd_Smed_v6_1442_0_1, dd_Smed_v6_1442_0_1, [RH, Score=48.9, Expect=3e-08]} {RNA1509_19006, RNA1509_3047, RNA1509_745} {RNA1310_28280, RNA1509_19006, RNA1509_3047, RNA1509_745} {RNA1509_19006, RNA1509_3047, RNA1509_745, RNA815_15959.1}
5. MligTC455_23695 21444 446.75 Mlig455_025308

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.349

CFL1 1.731 0.775 - - 0.956 - - Mlig455_025308 {REF} {Length: 1257} {TRANSSPLICED} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=92.0]} {Human: ENSG00000172757, CFL1, cofilin 1, [Score=69.7, Expect=3e-15]} {Mouse: ENSMUSG00000056201, Cfl1, cofilin 1, non-muscle, [Score=70.5, Expect=1e-15]} {Dmel: FBgn0011726, tsr, twinstar, [Score=80.1, Expect=1e-19]} {Celegans: WBGene00006794, unc-60, Actin-depolymerizing factor 2, isoform c, [Score=66.2, Expect=2e-14]} {Smed: dd_Smed_v6_260_0_1, dd_Smed_v6_260_0_1, [RH, Score=106, Expect=2e-30]} {RNA1509_1229, RNA1509_263, RNA1509_5166} {RNA1310_24120, RNA1509_1229, RNA1509_263, RNA1509_5166} {RNA1509_1229, RNA1509_263, RNA1509_5166, RNA815_11754.1}
6. MligTC455_35810 18355 382.4 Mlig455_053382

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.209

RPL22 1.68 0.711 - - 0.969 - - Mlig455_053382 {REF} {Length: 666} {TRANSSPLICED} {Pfam: Ribosomal L22e protein family [PF01776.19, score=171.9]} {Human: ENSG00000116251, RPL22, ribosomal protein L22, [RH, Score=130, Expect=2e-39]} {Mouse: ENSMUSG00000028936, Rpl22, ribosomal protein L22, [RH, Score=142, Expect=2e-44]} {Dmel: FBgn0015288, RpL22, Ribosomal protein L22, [RH, Score=127, Expect=1e-36]} {Celegans: WBGene00004434, rpl-22, 60S ribosomal protein L22, [RH, Score=142, Expect=7e-45]} {Smed: dd_Smed_v6_230_0_1, dd_Smed_v6_230_0_1, [RH, Score=128, Expect=2e-39]} {RNA1509_17319, RNA1509_18284, RNA1509_2600, RNA1509_369, RNA1509_8011} {RNA1310_51654.2, RNA1509_17319, RNA1509_18284, RNA1509_2600, RNA1509_369, RNA1509_8011} {RNA1509_17319, RNA1509_18284, RNA1509_2600, RNA1509_369, RNA1509_8011, RNA815_27241.1}
7. MligTC455_54243 649 13.51 Mlig455_013576, Mlig455_013629, Mlig455_061448

Neo: -

Age: -

Region-enriched R4: 2.848/0.00020
Region-enriched R3: 2.731/0.00000
Region-enriched R5: 1.792/0.00929

SHANK3 0.958 - - - 0.958 - -

Mlig455_013576 {REF} {Length: 4124} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=79.3]; Ankyrin repeats (many copies) [PF13637.8, score=61.8]; Ankyrin repeats (many copies) [PF13857.8, score=58.5]; Ankyrin repeat [PF13606.8, score=45.7]; Ankyrin repeat [PF00023.32, score=45.5]; PDZ domain [PF00595.26, score=35.3]; PDZ domain [PF17820.3, score=26.8]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=26.7]} {Human: ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=310, Expect=7e-88]; ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=310, Expect=8e-88]; ENSG00000162105, SHANK2, SH3 and multiple ankyrin repeat domains 2, [Score=300, Expect=3e-84]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [Score=303, Expect=1e-85]; ENSMUSG00000037541, Shank2, SH3 and multiple ankyrin repeat domains 2, [Score=300, Expect=1e-84]; ENSMUSG00000038738, Shank1, SH3 and multiple ankyrin repeat domains 1, [Score=293, Expect=5e-82]} {Dmel: FBgn0040752, Prosap, [Score=315, Expect=1e-89]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=299, Expect=1e-86]} {Smed: dd_Smed_v6_7862_0_1, dd_Smed_v6_7862_0_1, [Score=333, Expect=7e-99]} {RNA1509_12782, RNA1509_32192, RNA1509_59190} {RNA1310_7777, RNA1509_32192, RNA1509_59190} {RNA1509_32192, RNA1509_59190, RNA815_697}

Mlig455_013629 {REF} {Length: 4341} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=79.1]; Ankyrin repeats (many copies) [PF13637.8, score=62.1]; Ankyrin repeats (many copies) [PF13857.8, score=59.1]; Ankyrin repeat [PF00023.32, score=46.8]; Ankyrin repeat [PF13606.8, score=45.5]; PDZ domain [PF00595.26, score=35.3]; PDZ domain [PF17820.3, score=28.1]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=26.9]} {Human: ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=309, Expect=3e-87]; ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=308, Expect=3e-87]; ENSG00000162105, SHANK2, SH3 and multiple ankyrin repeat domains 2, [Score=301, Expect=1e-84]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [Score=302, Expect=2e-85]; ENSMUSG00000037541, Shank2, SH3 and multiple ankyrin repeat domains 2, [Score=301, Expect=6e-85]; ENSMUSG00000038738, Shank1, SH3 and multiple ankyrin repeat domains 1, [Score=291, Expect=1e-81]} {Dmel: FBgn0040752, Prosap, [Score=315, Expect=2e-89]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=302, Expect=1e-87]} {Smed: dd_Smed_v6_7862_0_1, dd_Smed_v6_7862_0_1, [Score=334, Expect=3e-99]} {RNA1509_12782} {RNA1310_7777, RNA1509_12782} {RNA1509_12782, RNA815_697}

Mlig455_061448 {REF} {Length: 3843} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=60.1]; Ankyrin repeats (many copies) [PF13637.8, score=53.1]; Ankyrin repeats (many copies) [PF13857.8, score=52.0]; PDZ domain [PF00595.26, score=34.9]; Ankyrin repeat [PF13606.8, score=33.8]; Group 7 allergen [PF16984.7, score=30.0]; PDZ domain [PF17820.3, score=27.3]; Ankyrin repeat [PF00023.32, score=26.0]} {Human: ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=164, Expect=2e-40]; ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=164, Expect=2e-40]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [Score=159, Expect=4e-39]} {Dmel: FBgn0040752, Prosap, [Score=152, Expect=6e-37]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=165, Expect=3e-41]} {Smed: dd_Smed_v6_4371_0_2, dd_Smed_v6_4371_0_2, [Score=194, Expect=7e-51]} {RNA1509_12782} {RNA1310_7777} {RNA815_697}
8. MligTC455_48135 1035 21.56 Mlig455_041301

Neo: -

Age: -

IMPA1 0.952 - - - 0.952 - - Mlig455_041301 {REF} {Length: 3809} {Pfam: Inositol monophosphatase family [PF00459.27, score=247.3]} {Human: ENSG00000133731, IMPA1, inositol monophosphatase 1, [RH, Score=254, Expect=3e-83]} {Mouse: ENSMUSG00000027531, Impa1, inositol (myo)-1(or 4)-monophosphatase 1, [RH, Score=249, Expect=2e-82]} {Dmel: FBgn0037063, CG9391, [RH, Score=224, Expect=8e-73]} {Celegans: WBGene00008765, ttx-7, Inositol monophosphatase ttx-7, [RH, Score=254, Expect=1e-84]} {Smed: dd_Smed_v6_5687_0_3, dd_Smed_v6_5687_0_3, [RH, Score=262, Expect=6e-88]} {RNA1509_18515} {RNA1310_29308.1, RNA1509_18515} {RNA1509_18515, RNA815_12923.1}
9. MligTC455_48136 1031 21.48 Mlig455_056203

Neo: -

Age: -

IMPA1 0.952 - - - 0.952 - - Mlig455_056203 {REF} {Length: 2937} {Pfam: Inositol monophosphatase family [PF00459.27, score=125.0]} {Human: ENSG00000133731, IMPA1, inositol monophosphatase 1, [Score=105, Expect=1e-26]} {Mouse: ENSMUSG00000024525, Impa2, inositol (myo)-1(or 4)-monophosphatase 2, [Score=106, Expect=1e-27]; ENSMUSG00000027531, Impa1, inositol (myo)-1(or 4)-monophosphatase 1, [Score=101, Expect=8e-26]} {Dmel: FBgn0037063, CG9391, [Score=103, Expect=1e-26]} {Celegans: WBGene00008765, ttx-7, Inositol monophosphatase ttx-7, [Score=110, Expect=2e-29]} {Smed: dd_Smed_v6_3979_0_1, dd_Smed_v6_3979_0_1, [Score=118, Expect=1e-32]} {RNA1509_36639} {RNA1310_25905.1} {RNA815_12923.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA