M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_48136

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48136 1031 21.48 Mlig455_056203

Neo: -

Age: -

 IMPA1 Mlig455_056203 {REF} {Length: 2937} {Pfam: Inositol monophosphatase family [PF00459.27, score=125.0]} {Human: ENSG00000133731, IMPA1, inositol monophosphatase 1, [Score=105, Expect=1e-26]} {Mouse: ENSMUSG00000024525, Impa2, inositol (myo)-1(or 4)-monophosphatase 2, [Score=106, Expect=1e-27]; ENSMUSG00000027531, Impa1, inositol (myo)-1(or 4)-monophosphatase 1, [Score=101, Expect=8e-26]} {Dmel: FBgn0037063, CG9391, [Score=103, Expect=1e-26]} {Celegans: WBGene00008765, ttx-7, Inositol monophosphatase ttx-7, [Score=110, Expect=2e-29]} {Smed: dd_Smed_v6_3979_0_1, dd_Smed_v6_3979_0_1, [Score=118, Expect=1e-32]} {RNA1509_36639} {RNA1310_25905.1} {RNA815_12923.1}

Cumulative graph for MligTC455_48136

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.748 4.697 0.43878 1.00000
RegionR2 -0.016 4.697 0.96950 1.00000
RegionR3 0.496 4.697 0.12214 0.60332
RegionR4 0.462 4.697 0.23897 0.53484
RegionR5 0.541 4.697 0.06860 0.23471
RegionR6 0.4 4.697 0.22981 0.81342
RegionR7 -0.343 4.697 0.44195 1.00000
RegionR8 -0.793 4.697 0.16324 0.73132

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.621 4.697 0.62696 1.00000
RegenerationR2 -0.262 4.697 0.46448 0.85485
RegenerationR3 -0.113 4.697 0.75840 0.96707
RegenerationR4 0.296 4.697 0.44248 0.83834
RegenerationR5 0.393 4.697 0.26082 0.69234
RegenerationR6 0.377 4.697 0.30771 0.65598
RegenerationBL 0.717 4.697 0.09378 0.36012
RegenerationTP 0.393 4.697 0.44629 0.86501


Genes with expression patterns similar to MligTC455_48136

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48136 1031 21.48 Mlig455_056203

Neo: -

Age: -

 IMPA1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_056203 {REF} {Length: 2937} {Pfam: Inositol monophosphatase family [PF00459.27, score=125.0]} {Human: ENSG00000133731, IMPA1, inositol monophosphatase 1, [Score=105, Expect=1e-26]} {Mouse: ENSMUSG00000024525, Impa2, inositol (myo)-1(or 4)-monophosphatase 2, [Score=106, Expect=1e-27]; ENSMUSG00000027531, Impa1, inositol (myo)-1(or 4)-monophosphatase 1, [Score=101, Expect=8e-26]} {Dmel: FBgn0037063, CG9391, [Score=103, Expect=1e-26]} {Celegans: WBGene00008765, ttx-7, Inositol monophosphatase ttx-7, [Score=110, Expect=2e-29]} {Smed: dd_Smed_v6_3979_0_1, dd_Smed_v6_3979_0_1, [Score=118, Expect=1e-32]} {RNA1509_36639} {RNA1310_25905.1} {RNA815_12923.1}
2. MligTC455_48135 1035 21.56 Mlig455_041301

Neo: -

Age: -

 IMPA1 5.977 0.999 1.000 1.000 0.997 0.982 0.999 Mlig455_041301 {REF} {Length: 3809} {Pfam: Inositol monophosphatase family [PF00459.27, score=247.3]} {Human: ENSG00000133731, IMPA1, inositol monophosphatase 1, [RH, Score=254, Expect=3e-83]} {Mouse: ENSMUSG00000027531, Impa1, inositol (myo)-1(or 4)-monophosphatase 1, [RH, Score=249, Expect=2e-82]} {Dmel: FBgn0037063, CG9391, [RH, Score=224, Expect=8e-73]} {Celegans: WBGene00008765, ttx-7, Inositol monophosphatase ttx-7, [RH, Score=254, Expect=1e-84]} {Smed: dd_Smed_v6_5687_0_3, dd_Smed_v6_5687_0_3, [RH, Score=262, Expect=6e-88]} {RNA1509_18515} {RNA1310_29308.1, RNA1509_18515} {RNA1509_18515, RNA815_12923.1}
3. MligTC455_52552 18866 393.05 Mlig455_060451, Mlig455_060494

Neo: Int S/G2/M

Age: Down-Down-Down, logFC(26M/2M)=9.276

 RPL36 2.573 0.738 - - 0.960 - 0.875

Mlig455_060451 {REF} {Length: 488} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=136.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=118, Expect=2e-35]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=118, Expect=1e-35]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=105, Expect=8e-31]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=101, Expect=4e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=108, Expect=2e-32]} {RNA1509_52420, RNA1509_7567} {RNA1310_72529.3, RNA1509_7567} {RNA1509_7567, RNA815_37483}

Mlig455_060494 {REF} {Length: 490} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=136.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=118, Expect=2e-35]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=118, Expect=1e-35]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=105, Expect=8e-31]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=101, Expect=4e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=108, Expect=2e-32]} {RNA1509_11076, RNA1509_4929, RNA1509_52420, RNA1509_5790} {RNA1310_72529.1, RNA1509_11076, RNA1509_4929, RNA1509_52420, RNA1509_5790} {RNA1509_11076, RNA1509_4929, RNA1509_52420, RNA1509_5790, RNA815_37483}
4. MligTC455_49309 585 12.19 Mlig455_023541

Neo: -

Age: -

 2.543 - - 0.817 0.951 0.775 - Mlig455_023541 {REF} {Length: 5523} {Celegans: WBGene00022664, ZK121.2, [Score=49.7, Expect=6e-06]} {Smed: dd_Smed_v6_9972_0_1, dd_Smed_v6_9972_0_1, [Score=50.1, Expect=1e-06]} {RNA1509_4676} {RNA1310_6238, RNA1509_4676} {RNA1509_4676, RNA815_12656}
5. MligTC455_16936 2308 48.09 Mlig455_049166, Mlig455_049218

Neo: Int S/G2/M

Age: -

 C9orf64 1.715 0.761 - - - - 0.954

Mlig455_049166 {REF} {Length: 1170} {TRANSSPLICED} {Pfam: Potential Queuosine, Q, salvage protein family [PF10343.11, score=358.2]} {Human: ENSG00000165118, C9orf64, chromosome 9 open reading frame 64, [RH, Score=292, Expect=4e-97]} {Mouse: ENSMUSG00000021550, 2210016F16Rik, RIKEN cDNA 2210016F16 gene, [RH, Score=287, Expect=3e-95]} {Dmel: FBgn0034614, CG9752, [RH, Score=288, Expect=2e-95]} {Celegans: WBGene00015702, C11D2.4, [RH, Score=244, Expect=1e-78]} {Smed: dd_Smed_v6_5644_0_1, dd_Smed_v6_5644_0_1, [RH, Score=331, Expect=8e-113]} {RNA1509_25896} {RNA1310_22753} {RNA815_13489}

Mlig455_049218 {REF} {Length: 1158} {TRANSSPLICED} {Pfam: Potential Queuosine, Q, salvage protein family [PF10343.11, score=359.3]} {Human: ENSG00000165118, C9orf64, chromosome 9 open reading frame 64, [RH, Score=291, Expect=2e-96]} {Mouse: ENSMUSG00000021550, 2210016F16Rik, RIKEN cDNA 2210016F16 gene, [RH, Score=287, Expect=3e-95]} {Dmel: FBgn0034614, CG9752, [RH, Score=286, Expect=6e-95]} {Celegans: WBGene00015702, C11D2.4, [RH, Score=241, Expect=1e-77]} {Smed: dd_Smed_v6_5644_0_1, dd_Smed_v6_5644_0_1, [RH, Score=329, Expect=4e-112]} {RNA1509_25896} {RNA1310_22753, RNA1509_25896} {RNA1509_25896, RNA815_13489}
6. MligTC455_34335 663 13.81 Mlig455_056712

Neo: -

Age: -

Region-enriched R3: 1.005/0.04018

 SLC27A1 1.694 - - - 0.951 - 0.743 Mlig455_056712 {REF} {Length: 4873} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=249.3]; AMP-binding enzyme C-terminal domain [PF13193.8, score=37.0]} {Human: ENSG00000130304, SLC27A1, solute carrier family 27 member 1, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000059316, Slc27a4, solute carrier family 27 (fatty acid transporter), member 4, [RH, Score=602, Expect=0.0]; ENSMUSG00000031808, Slc27a1, solute carrier family 27 (fatty acid transporter), member 1, [RH, Score=596, Expect=0.0]} {Dmel: FBgn0265187, CG44252, [RH, Score=565, Expect=0.0]} {Celegans: WBGene00017012, acs-22, Fatty Acid CoA Synthetase family, [RH, Score=478, Expect=3e-161]} {Smed: dd_Smed_v6_4057_0_1, dd_Smed_v6_4057_0_1, [RH, Score=617, Expect=0.0]} {RNA1509_11133, RNA1509_25949, RNA1509_38088, RNA1509_45315, RNA1509_9470} {RNA1310_11936, RNA1509_11133, RNA1509_25949, RNA1509_38088, RNA1509_45315, RNA1509_9470} {RNA1509_11133, RNA1509_25949, RNA1509_38088, RNA1509_45315, RNA1509_9470, RNA815_4353}
7. MligTC455_45331 646 13.45 Mlig455_038588

Neo: -

Age: -

Region-enriched R5: 1.393/0.04906

 0.973 - - - - - 0.973 Mlig455_038588 {REF} {Length: 766} {TRANSSPLICED} {RNA1509_11471} {RNA1310_45904} {RNA815_20936.2}
8. MligTC455_45395 1764 36.76 Mlig455_001728, Mlig455_063313

Neo: -

Age: -

 STK19 0.961 - - - - - 0.961

Mlig455_001728 {REF} {Length: 1572} {RNA1509_14993} {RNA1310_24145} {RNA815_9902.1}

Mlig455_063313 {REF} {Length: 1663} {TRANSSPLICED} {Pfam: Serine-threonine protein kinase 19 [PF10494.11, score=98.7]} {Human: ENSG00000206342, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=2e-34]; ENSG00000236250, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=1e-34]; ENSG00000226257, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=1e-34]; ENSG00000204344, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=3e-34]; ENSG00000226033, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=3e-34]; ENSG00000234947, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=1e-34]} {Mouse: ENSMUSG00000061207, Stk19, serine/threonine kinase 19, [RH, Score=124, Expect=5e-34]} {RNA1509_14993, RNA1509_47033} {RNA1310_24145, RNA1509_14993, RNA1509_47033} {RNA1509_14993, RNA1509_47033, RNA815_9902.1}
9. MligTC455_36383 1523 31.74 Mlig455_005637

Neo: Neoblast

Age: Down-Up-Up

Region-enriched R5: 1.008/0.01518

 0.958 - - - 0.958 - - Mlig455_005637 {REF} {Length: 370} {TRANSSPLICED} {RNA1509_4492} {RNA1310_87469, RNA1509_4492} {RNA1509_4492, RNA815_48352}
10. MligTC455_18390 856 17.84 Mlig455_041422

Neo: -

Age: -

Region-enriched R5: 1.353/0.00136

 EMC8 0.954 - - - 0.954 - - Mlig455_041422 {REF} {Length: 2090} {TRANSSPLICED} {Pfam: Uncharacterised protein family (UPF0172) [PF03665.15, score=171.9]} {Human: ENSG00000131148, EMC8, ER membrane protein complex subunit 8, [RH, Score=127, Expect=2e-36]; ENSG00000285377, EMC9, ER membrane protein complex subunit 9, [RH, Score=123, Expect=8e-35]; ENSG00000100908, EMC9, ER membrane protein complex subunit 9, [RH, Score=123, Expect=8e-35]} {Mouse: ENSMUSG00000031819, Emc8, ER membrane protein complex subunit 8, [RH, Score=128, Expect=6e-37]; ENSMUSG00000022217, Emc9, ER membrane protein complex subunit 9, [RH, Score=128, Expect=5e-37]} {Dmel: FBgn0034791, EMC8-9, ER Membrane protein Complex 8-9, [RH, Score=110, Expect=5e-30]} {Celegans: WBGene00009118, F25H2.4, [RH, Score=67.0, Expect=1e-13]} {Smed: dd_Smed_v6_5425_0_1, dd_Smed_v6_5425_0_1, [RH, Score=125, Expect=4e-36]} {RNA1509_24242} {RNA1310_31036.1} {RNA815_19165}
11. MligTC455_46915 1355 28.24 Mlig455_019611

Neo: -

Age: -

 BOLA3 0.954 - - - - - 0.954 Mlig455_019611 {REF} {Length: 711} {TRANSSPLICED} {Pfam: BolA-like protein [PF01722.20, score=42.2]} {Human: ENSG00000163170, BOLA3, bolA family member 3, [RH, Score=80.5, Expect=9e-20]} {Mouse: ENSMUSG00000045160, Bola3, bolA-like 3 (E. coli), [RH, Score=79.7, Expect=9e-20]} {Celegans: WBGene00013671, Y105E8A.11, [RH, Score=61.6, Expect=7e-13]} {Smed: dd_Smed_v6_4757_0_1, dd_Smed_v6_4757_0_1, [RH, Score=86.7, Expect=8e-23]} {RNA1509_11360, RNA1509_13607, RNA1509_28060} {RNA1310_51548, RNA1509_11360, RNA1509_13607, RNA1509_28060} {RNA1509_11360, RNA1509_13607, RNA1509_28060, RNA815_26504}
12. MligTC455_18082 625 13.01 Mlig455_044013

Neo: -

Age: -

 NMRK1 0.952 - - - - - 0.952 Mlig455_044013 {REF} {Length: 1197} {TRANSSPLICED} {Pfam: AAA domain [PF13238.8, score=34.1]} {Human: ENSG00000106733, NMRK1, nicotinamide riboside kinase 1, [RH, Score=75.5, Expect=2e-16]} {Mouse: ENSMUSG00000037847, Nmrk1, nicotinamide riboside kinase 1, [RH, Score=80.9, Expect=9e-19]} {RNA1509_17230} {RNA1310_32721} {RNA815_197.2}
13. MligTC455_28310 14665 305.51 Mlig455_038576

Neo: -

Age: Up-Down-Up

 DBI 0.952 - - - 0.952 - - Mlig455_038576 {REF} {Length: 4553} {Pfam: Acyl CoA binding protein [PF00887.21, score=97.1]} {Human: ENSG00000155368, DBI, diazepam binding inhibitor, acyl-CoA binding protein, [RH, Score=112, Expect=5e-34]; ENSG00000176244, ACBD7, acyl-CoA binding domain containing 7, [RH, Score=108, Expect=4e-32]} {Mouse: ENSMUSG00000026385, Dbi, diazepam binding inhibitor, [RH, Score=112, Expect=5e-34]; ENSMUSG00000026644, Acbd7, acyl-Coenzyme A binding domain containing 7, [RH, Score=107, Expect=8e-32]} {Dmel: FBgn0031992, CG8498, [RH, Score=108, Expect=2e-32]} {Celegans: WBGene00016655, acbp-1, Acyl-CoA-binding protein homolog 1, [RH, Score=99.8, Expect=3e-29]} {Smed: dd_Smed_v6_160_0_1, dd_Smed_v6_160_0_1, [RH, Score=109, Expect=4e-33]} {RNA1509_17069, RNA1509_217, RNA1509_37371, RNA1509_47220, RNA1509_7508, RNA1509_9262} {RNA1310_570.1, RNA1509_17069, RNA1509_217, RNA1509_37371, RNA1509_7508, RNA1509_9262} {RNA1509_17069, RNA1509_217, RNA1509_37371, RNA1509_7508, RNA1509_9262, RNA815_134.1}
14. MligTC455_37137 20036 417.41 Mlig455_023454

Neo: -

Age: -

 CYCS 0.952 - - - 0.952 - - Mlig455_023454 {REF} {Length: 912} {TRANSSPLICED} {Pfam: Cytochrome c [PF00034.23, score=49.1]; Cytochrome C oxidase, cbb3-type, subunit III [PF13442.8, score=31.2]} {Human: ENSG00000172115, CYCS, cytochrome c, somatic, [RH, Score=176, Expect=1e-58]} {Mouse: ENSMUSG00000063694, Cycs, cytochrome c, somatic, [RH, Score=182, Expect=5e-61]; ENSMUSG00000058927, Gm10053, predicted gene 10053, [RH, Score=182, Expect=5e-61]} {Dmel: FBgn0284248, Cyt-c-p, Cytochrome c proximal, [RH, Score=181, Expect=7e-61]} {Celegans: WBGene00017121, cyc-2.1, Cytochrome c 2.1, [RH, Score=145, Expect=1e-46]} {Smed: dd_Smed_v6_464_0_1, dd_Smed_v6_464_0_1, [RH, Score=189, Expect=3e-64]} {RNA1509_708} {RNA1310_9255} {RNA815_18199.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA