TomoSeq data search

Data search

Results for MligTC455_37226

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37226	170	3.54	Mlig455_056029	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.883	COL24A1	Mlig455_056029 {REF} {Length: 5695} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=484.5]; Fibrillar collagen C-terminal domain [PF01410.20, score=67.9]; Mucin-like glycoprotein [PF01456.19, score=21.5]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=417, Expect=1e-119]} {Mouse: ENSMUSG00000028197, Col24a1, collagen, type XXIV, alpha 1, [Score=360, Expect=5e-101]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=395, Expect=2e-112]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=311, Expect=5e-86]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=613, Expect=0.0]} {RNA1509_3110} {RNA1310_483.1} {RNA815_4483}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37226

170

3.54

Mlig455_056029

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.883

COL24A1

Mlig455_056029 {REF} {Length: 5695} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=484.5]; Fibrillar collagen C-terminal domain [PF01410.20, score=67.9]; Mucin-like glycoprotein [PF01456.19, score=21.5]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=417, Expect=1e-119]} {Mouse: ENSMUSG00000028197, Col24a1, collagen, type XXIV, alpha 1, [Score=360, Expect=5e-101]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=395, Expect=2e-112]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=311, Expect=5e-86]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=613, Expect=0.0]} {RNA1509_3110} {RNA1310_483.1} {RNA815_4483}

Cumulative graph for MligTC455_37226

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.004	2.317	0.17325	0.79883
RegionR2	0.855	2.317	0.48646	0.86933
RegionR3	1.219	2.317	0.26924	0.81396
RegionR4	1.402	2.317	0.31505	0.63088
RegionR5	0.723	2.317	0.53904	0.90224
RegionR6	1.38	2.317	0.21973	0.79930
RegionR7	-1.053	2.317	0.99008	1.00000
RegionR8	1.477	2.317	0.36391	0.99804

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.752	2.317	0.12484	0.85519
RegenerationR2	-1.613	2.317	0.08347	0.46408
RegenerationR3	-0.91	2.317	0.33448	0.75942
RegenerationR4	-0.138	2.317	0.92136	1.00000
RegenerationR5	-0.619	2.317	0.55694	0.88938
RegenerationR6	-1.372	2.317	0.17959	0.51424
RegenerationBL	-0.797	2.317	0.50937	0.87306
RegenerationTP	0.02	2.317	0.98366	1.00000

Genes with expression patterns similar to MligTC455_37226

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37226	170	3.54	Mlig455_056029	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.883	COL24A1	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_056029 {REF} {Length: 5695} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=484.5]; Fibrillar collagen C-terminal domain [PF01410.20, score=67.9]; Mucin-like glycoprotein [PF01456.19, score=21.5]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=417, Expect=1e-119]} {Mouse: ENSMUSG00000028197, Col24a1, collagen, type XXIV, alpha 1, [Score=360, Expect=5e-101]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=395, Expect=2e-112]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=311, Expect=5e-86]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=613, Expect=0.0]} {RNA1509_3110} {RNA1310_483.1} {RNA815_4483}
2.	MligTC455_23310	304	6.34	Mlig455_061447	Neo: - Age: Down-Up-Down		0.969	-	-	-	-	0.969	-	Mlig455_061447 {REF} {Length: 953} {RNA1509_48616} {RNA1310_6959} {RNA815_10949}
3.	MligTC455_02516	97	2.01	Mlig455_055457	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_055457 {REF} {Length: 4031} {Pfam: Glycine-rich domain-containing protein-like [PF07173.14, score=151.1]} {Celegans: WBGene00017980, F32B5.7, [RH, Score=268, Expect=8e-78]} {Smed: dd_Smed_v6_5132_0_1, dd_Smed_v6_5132_0_1, [RH, Score=383, Expect=7e-121]} {RNA1509_5401} {RNA1310_7934.1, RNA1509_5401} {RNA1509_5401, RNA815_2330}
4.	MligTC455_10029	31	0.65	Mlig455_034776	Neo: - Age: -	FCN3	0.962	-	-	-	-	0.962	-	Mlig455_034776 {REF} {Length: 1488} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=116.8]} {Human: ENSG00000142748, FCN3, ficolin 3, [Score=98.2, Expect=4e-23]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=92.8, Expect=2e-20]; ENSMUSG00000026938, Fcna, ficolin A, [Score=88.2, Expect=2e-19]} {Dmel: FBgn0051832, CG31832, [Score=82.0, Expect=5e-18]} {Celegans: WBGene00020516, T15B7.1, [Score=59.3, Expect=8e-10]}