Data search
Results for MligTC455_10029
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_10029 | 31 | 0.65 | Mlig455_034776 | Neo: - Age: - |
FCN3 | Mlig455_034776 {REF} {Length: 1488} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=116.8]} {Human: ENSG00000142748, FCN3, ficolin 3, [Score=98.2, Expect=4e-23]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=92.8, Expect=2e-20]; ENSMUSG00000026938, Fcna, ficolin A, [Score=88.2, Expect=2e-19]} {Dmel: FBgn0051832, CG31832, [Score=82.0, Expect=5e-18]} {Celegans: WBGene00020516, T15B7.1, [Score=59.3, Expect=8e-10]} |
Cumulative graph for MligTC455_10029
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.95 | 0.748 | 1.00000 | 1.00000 | |
| RegionR2 | 2.204 | 0.748 | 0.99968 | 1.00000 | |
| RegionR3 | 1.837 | 0.748 | 1.00000 | 1.00000 | |
| RegionR4 | -1.172 | 0.748 | 1.00000 | 1.00000 | |
| RegionR5 | -0.631 | 0.748 | 0.99978 | 1.00000 | |
| RegionR6 | 0.706 | 0.748 | 1.00000 | 1.00000 | |
| RegionR7 | -1.447 | 0.748 | 0.99995 | 1.00000 | |
| RegionR8 | -0.546 | 0.748 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.737 | 0.748 | 1.00000 | 1.00000 | |
| RegenerationR2 | -4.452 | 0.748 | 0.00912 | 0.15223 | |
| RegenerationR3 | -1.348 | 0.748 | 1.00000 | 1.00000 | |
| RegenerationR4 | 0.119 | 0.748 | 0.99960 | 1.00000 | |
| RegenerationR5 | 0.229 | 0.748 | 1.00000 | 1.00000 | |
| RegenerationR6 | -3.195 | 0.748 | 0.14137 | 0.46065 | |
| RegenerationBL | -2.691 | 0.748 | 1.00000 | 1.00000 | |
| RegenerationTP | 1.583 | 0.748 | 1.00000 | 1.00000 |
Genes with expression patterns similar to MligTC455_10029
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_10029 | 31 | 0.65 | Mlig455_034776 | Neo: - Age: - |
FCN3 | 2 | - | - | 1.000 | - | 1.000 | - | Mlig455_034776 {REF} {Length: 1488} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=116.8]} {Human: ENSG00000142748, FCN3, ficolin 3, [Score=98.2, Expect=4e-23]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=92.8, Expect=2e-20]; ENSMUSG00000026938, Fcna, ficolin A, [Score=88.2, Expect=2e-19]} {Dmel: FBgn0051832, CG31832, [Score=82.0, Expect=5e-18]} {Celegans: WBGene00020516, T15B7.1, [Score=59.3, Expect=8e-10]} |
| 2. | MligTC455_24273 | 48 | 1.01 | Mlig455_005193 | Neo: - Age: - |
AC254952.1 | 1 | - | - | 1.000 | - | - | - | Mlig455_005193 {REF} {Length: 1491} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=92.7]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=64.9]} {Human: ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=124, Expect=2e-30]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=122, Expect=8e-30]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=122, Expect=8e-30]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=124, Expect=1e-30]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=123, Expect=2e-30]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=115, Expect=1e-27]} {Celegans: WBGene00017580, lgc-4, Ligand-gated ion channel 4, [Score=117, Expect=2e-28]} {Smed: dd_Smed_v6_8058_0_1, dd_Smed_v6_8058_0_1, [Score=114, Expect=2e-27]} {RNA1509_43533} {RNA1310_21349.2} {RNA815_39337} |
| 3. | MligTC455_06776 | 68 | 1.41 | Mlig455_000689, Mlig455_000745 | Neo: - Age: - |
0.993 | - | - | 0.993 | - | - | - | Mlig455_000689 {REF} {Length: 1877} {Pfam: Mitochondrial Myo2 receptor-related protein [PF08505.12, score=19.0]} {RNA1509_21195} {RNA1310_20161.1} {RNA815_26275} Mlig455_000745 {REF} {Length: 1899} {Pfam: Family of unknown function (DUF5308) [PF17233.4, score=20.9]} {RNA1509_21195} {RNA1310_20161.1} {RNA815_26275} |
|
| 4. | MligTC455_42789 | 51 | 1.05 | Mlig455_049242 | Neo: - Age: - |
0.982 | - | - | 0.982 | - | - | - | Mlig455_049242 {REF} {Length: 2156} {NoTransDecoderORF} {RNA1509_49659} {RNA1310_121980} {RNA815_13521.1} | |
| 5. | MligTC455_02516 | 97 | 2.01 | Mlig455_055457 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_055457 {REF} {Length: 4031} {Pfam: Glycine-rich domain-containing protein-like [PF07173.14, score=151.1]} {Celegans: WBGene00017980, F32B5.7, [RH, Score=268, Expect=8e-78]} {Smed: dd_Smed_v6_5132_0_1, dd_Smed_v6_5132_0_1, [RH, Score=383, Expect=7e-121]} {RNA1509_5401} {RNA1310_7934.1, RNA1509_5401} {RNA1509_5401, RNA815_2330} | |
| 6. | MligTC455_14363 | 57 | 1.18 | Mlig455_014133 | Neo: - Age: - Region-enriched R2: 4.499/0.01811 |
0.968 | - | - | 0.968 | - | - | - | Mlig455_014133 {REF} {Length: 323} {NoTransDecoderORF} | |
| 7. | MligTC455_37226 | 170 | 3.54 | Mlig455_056029 | Neo: - |
COL24A1 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_056029 {REF} {Length: 5695} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=484.5]; Fibrillar collagen C-terminal domain [PF01410.20, score=67.9]; Mucin-like glycoprotein [PF01456.19, score=21.5]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=417, Expect=1e-119]} {Mouse: ENSMUSG00000028197, Col24a1, collagen, type XXIV, alpha 1, [Score=360, Expect=5e-101]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=395, Expect=2e-112]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=311, Expect=5e-86]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=613, Expect=0.0]} {RNA1509_3110} {RNA1310_483.1} {RNA815_4483} |
| 8. | MligTC455_27552 | 72 | 1.5 | Mlig455_015707 | Neo: - Age: - |
KIAA1586 | 0.955 | - | - | 0.955 | - | - | - | Mlig455_015707 {REF} {Length: 4648} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=25.9]} {Human: ENSG00000168116, KIAA1586, KIAA1586, [Score=65.1, Expect=3e-11]} {Smed: dd_Smed_v6_20085_0_5, dd_Smed_v6_20085_0_5, [Score=45.4, Expect=1e-05]} {RNA1509_33822} {RNA1310_2923, RNA1509_33822} {RNA1509_33822, RNA815_14993} |
| 9. | MligTC455_41204 | 27 | 0.57 | Mlig455_001961 | Neo: - Age: - |
B4GALT2 | 0.955 | - | - | 0.955 | - | - | - | Mlig455_001961 {REF} {Length: 1967} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=128.6]; N-terminal domain of galactosyltransferase [PF02709.16, score=95.8]} {Human: ENSG00000117411, B4GALT2, beta-1,4-galactosyltransferase 2, [Score=215, Expect=6e-68]; ENSG00000121578, B4GALT4, beta-1,4-galactosyltransferase 4, [Score=211, Expect=1e-66]; ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=210, Expect=1e-65]; ENSG00000158470, B4GALT5, beta-1,4-galactosyltransferase 5, [Score=207, Expect=1e-64]; ENSG00000118276, B4GALT6, beta-1,4-galactosyltransferase 6, [Score=205, Expect=1e-64]; ENSG00000158850, B4GALT3, beta-1,4-galactosyltransferase 3, [Score=205, Expect=8e-64]} {Mouse: ENSMUSG00000028541, B4galt2, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2, [Score=215, Expect=4e-68]; ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=215, Expect=9e-68]; ENSMUSG00000017929, B4galt5, UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5, [Score=209, Expect=9e-66]; ENSMUSG00000056124, B4galt6, UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6, [Score=206, Expect=1e-64]; ENSMUSG00000052423, B4galt3, UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3, [Score=205, Expect=7e-64]} {Dmel: FBgn0027538, beta4GalNAcTA, [Score=203, Expect=3e-63]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=222, Expect=4e-71]} {Smed: dd_Smed_v6_13813_0_1, dd_Smed_v6_13813_0_1, [RH, Score=240, Expect=8e-79]} {RNA1310_30379} {RNA815_40748} |
| 10. | MligTC455_27213 | 42 | 0.87 | Mlig455_002807 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_002807 {REF} {Length: 5092} {TRANSSPLICED} {RNA1509_16719} {RNA1310_3342} {RNA815_12812} | |
| 11. | MligTC455_07654 | 364 | 7.59 | Mlig455_005644, Mlig455_008675 | Neo: - Age: logFC(26M/2M)=-0.220 Region-enriched R5: 1.830/0.03192 |
DNAAF4 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_005644 {REF} {Length: 2398} {Pfam: Tetratricopeptide repeat [PF07719.19, score=41.1]; TPR repeat [PF13414.8, score=32.0]; Tetratricopeptide repeat [PF00515.30, score=31.1]; CS domain [PF04969.18, score=29.8]; Tetratricopeptide repeat [PF13424.8, score=20.3]; Tetratricopeptide repeat [PF13181.8, score=20.0]} {Human: ENSG00000256061, DNAAF4, dynein axonemal assembly factor 4, [RH, Score=254, Expect=5e-80]} {Mouse: ENSMUSG00000092192, Dyx1c1, dyslexia susceptibility 1 candidate 1, [RH, Score=247, Expect=2e-77]; ENSMUSG00000089865, Gm44503, predicted readthrough transcript (NMD candidate), 44503, [RH, Score=241, Expect=1e-75]} {Dmel: FBgn0024352, Stip1, Stress induced phosphoprotein 1, [Score=62.8, Expect=2e-10]} {Celegans: WBGene00019983, sti-1, Stress-induced-phosphoprotein 1, [Score=53.5, Expect=1e-07]} {Smed: dd_Smed_v6_12396_0_1, dd_Smed_v6_12396_0_1, [RH, Score=283, Expect=1e-91]} {RNA1509_9753} {RNA1310_17861} {RNA815_7165} Mlig455_008675 {REF} {Length: 1981} {Pfam: Tetratricopeptide repeat [PF07719.19, score=41.2]; TPR repeat [PF13414.8, score=32.1]; Tetratricopeptide repeat [PF00515.30, score=31.2]; CS domain [PF04969.18, score=29.9]; Tetratricopeptide repeat [PF13424.8, score=20.3]; Tetratricopeptide repeat [PF13181.8, score=20.1]} {Human: ENSG00000256061, DNAAF4, dynein axonemal assembly factor 4, [RH, Score=254, Expect=4e-80]} {Mouse: ENSMUSG00000092192, Dyx1c1, dyslexia susceptibility 1 candidate 1, [RH, Score=247, Expect=1e-77]; ENSMUSG00000089865, Gm44503, predicted readthrough transcript (NMD candidate), 44503, [RH, Score=241, Expect=9e-76]} {Dmel: FBgn0024352, Stip1, Stress induced phosphoprotein 1, [Score=63.2, Expect=2e-10]} {Celegans: WBGene00019983, sti-1, Stress-induced-phosphoprotein 1, [Score=53.9, Expect=8e-08]} {Smed: dd_Smed_v6_12396_0_1, dd_Smed_v6_12396_0_1, [RH, Score=283, Expect=4e-92]} {RNA1509_20118, RNA1509_9753} {RNA1310_17861, RNA1509_20118} {RNA1509_20118, RNA815_7165} |
Berezikov Lab - 2020-2021 © ERIBA