TomoSeq data search

Data search

Results for MligTC455_37232

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37232	150	3.12	Mlig455_059380	Neo: - Age: Down-Up-Down		Mlig455_059380 {REF} {Length: 1630} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=32.7]; Prokaryotic RING finger family 4 [PF14447.8, score=19.8]} {RNA1509_38154} {RNA1310_11898.1} {RNA815_18631}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_37232

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.329	2.543	0.32391	0.97293
RegionR2	0.918	2.543	0.56180	0.92376
RegionR3	1.469	2.543	0.26581	0.81017
RegionR4	0.6	2.543	0.66146	0.96085
RegionR5	0.113	2.543	0.83527	1.00000
RegionR6	1.086	2.543	0.41810	0.98605
RegionR7	0.331	2.543	0.78570	1.00000
RegionR8	0.811	2.543	0.66147	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.083	2.543	0.99984	1.00000
RegenerationR2	1.879	2.543	0.12740	0.55157
RegenerationR3	1.101	2.543	0.40543	0.80609
RegenerationR4	-0.052	2.543	0.95011	1.00000
RegenerationR5	1.211	2.543	0.34557	0.76091
RegenerationR6	-0.848	2.543	0.54611	0.83666
RegenerationBL	0.393	2.543	0.83031	1.00000
RegenerationTP	1.794	2.543	0.26387	0.71201

Genes with expression patterns similar to MligTC455_37232

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37232	150	3.12	Mlig455_059380	Neo: - Age: Down-Up-Down		5	1.000	1.000	1.000	-	1.000	1.000	Mlig455_059380 {REF} {Length: 1630} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=32.7]; Prokaryotic RING finger family 4 [PF14447.8, score=19.8]} {RNA1509_38154} {RNA1310_11898.1} {RNA815_18631}
2.	MligTC455_28309	78	1.63	Mlig455_021915	Neo: - Age: Up-Down-Up	FAT3	0.959	-	-	-	-	-	0.959	Mlig455_021915 {REF} {Length: 12300} {Pfam: Cadherin domain [PF00028.19, score=270.9]; Cadherin-like [PF16184.7, score=24.6]} {Human: ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=241, Expect=2e-65]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=241, Expect=2e-65]; ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=238, Expect=2e-64]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=246, Expect=3e-67]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=243, Expect=2e-66]} {Dmel: FBgn0261574, kug, kugelei, [Score=245, Expect=3e-67]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=193, Expect=2e-50]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=196, Expect=2e-51]} {RNA1509_14139} {RNA1310_570.1} {RNA815_134.1}
3.	MligTC455_47507	202	4.2	Mlig455_015950, Mlig455_059717	Neo: - Age: - Region-enriched R4: 2.654/0.01994		0.952	-	-	-	-	0.952	-	Mlig455_015950 {REF} {Length: 1452} {Pfam: Thymosin beta-4 family [PF01290.22, score=20.4]} {RNA1509_27585, RNA1509_48356} {RNA1310_37960, RNA1509_48356} {RNA1509_48356, RNA815_19942} Mlig455_059717 {REF} {Length: 1394} {Pfam: Thymosin beta-4 family [PF01290.22, score=20.4]} {RNA1509_27585} {RNA1310_37960} {RNA815_19942}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_37232

150

3.12

Mlig455_059380

Neo: -

Age: Down-Up-Down

1.000

MligTC455_28309

1.63

Mlig455_021915

Neo: -

Age: Up-Down-Up

FAT3

0.959

Mlig455_021915 {REF} {Length: 12300} {Pfam: Cadherin domain [PF00028.19, score=270.9]; Cadherin-like [PF16184.7, score=24.6]} {Human: ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=241, Expect=2e-65]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=241, Expect=2e-65]; ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=238, Expect=2e-64]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=246, Expect=3e-67]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=243, Expect=2e-66]} {Dmel: FBgn0261574, kug, kugelei, [Score=245, Expect=3e-67]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=193, Expect=2e-50]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=196, Expect=2e-51]} {RNA1509_14139} {RNA1310_570.1} {RNA815_134.1}

MligTC455_47507

202

4.2

Mlig455_015950, Mlig455_059717

Neo: -

Age: -

Region-enriched R4: 2.654/0.01994

0.952

Mlig455_015950 {REF} {Length: 1452} {Pfam: Thymosin beta-4 family [PF01290.22, score=20.4]} {RNA1509_27585, RNA1509_48356} {RNA1310_37960, RNA1509_48356} {RNA1509_48356, RNA815_19942}

Mlig455_059717 {REF} {Length: 1394} {Pfam: Thymosin beta-4 family [PF01290.22, score=20.4]} {RNA1509_27585} {RNA1310_37960} {RNA815_19942}