TomoSeq data search

Data search

Results for MligTC455_47507

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47507	202	4.20	Mlig455_015950, Mlig455_059717	Neo: - Age: - Region-enriched R4: 2.654/0.01994		Mlig455_015950 {REF} {Length: 1452} {Pfam: Thymosin beta-4 family [PF01290.22, score=20.4]} {RNA1509_27585, RNA1509_48356} {RNA1310_37960, RNA1509_48356} {RNA1509_48356, RNA815_19942} Mlig455_059717 {REF} {Length: 1394} {Pfam: Thymosin beta-4 family [PF01290.22, score=20.4]} {RNA1509_27585} {RNA1310_37960} {RNA815_19942}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_47507

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.556	2.699	0.35781	1.00000
RegionR2	-0.235	2.699	0.91728	1.00000
RegionR3	-0.161	2.699	0.89790	1.00000
RegionR4	2.654	2.699	0.00231	0.01994
RegionR5	-0.272	2.699	0.92238	1.00000
RegionR6	0.319	2.699	0.70511	1.00000
RegionR7	1.274	2.699	0.17451	0.76747
RegionR8	0.979	2.699	0.40460	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.999	2.699	0.99996	1.00000
RegenerationR2	-1.514	2.699	0.01026	0.16321
RegenerationR3	-0.051	2.699	0.92640	1.00000
RegenerationR4	-1.712	2.699	0.00844	0.13672
RegenerationR5	-0.23	2.699	0.72392	0.96070
RegenerationR6	-1.547	2.699	0.02457	0.19555
RegenerationBL	-1.571	2.699	0.07061	0.30938
RegenerationTP	-1.358	2.699	0.10423	0.50031

Genes with expression patterns similar to MligTC455_47507

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47507	202	4.2	Mlig455_015950, Mlig455_059717	Neo: - Age: - Region-enriched R4: 2.654/0.01994		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015950 {REF} {Length: 1452} {Pfam: Thymosin beta-4 family [PF01290.22, score=20.4]} {RNA1509_27585, RNA1509_48356} {RNA1310_37960, RNA1509_48356} {RNA1509_48356, RNA815_19942} Mlig455_059717 {REF} {Length: 1394} {Pfam: Thymosin beta-4 family [PF01290.22, score=20.4]} {RNA1509_27585} {RNA1310_37960} {RNA815_19942}
2.	MligTC455_48774	173	3.6	Mlig455_004326	Neo: - Age: Down-Up-Down	TCEA2	0.971	-	-	0.971	-	-	-	Mlig455_004326 {REF} {Length: 2346} {Pfam: Transcription factor S-II (TFIIS), central domain [PF07500.16, score=92.8]; Transcription factor S-II (TFIIS) [PF01096.20, score=46.7]; TFIIS helical bundle-like domain [PF08711.13, score=28.2]} {Human: ENSG00000171703, TCEA2, transcription elongation factor A2, [Score=160, Expect=2e-44]} {Mouse: ENSMUSG00000059540, Tcea2, transcription elongation factor A (SII), 2, [Score=164, Expect=3e-46]} {Dmel: FBgn0010422, TfIIS, RNA polymerase II elongation factor, [Score=153, Expect=3e-42]} {Celegans: WBGene00012000, T24H10.1, Putative transcription elongation factor S-II, [Score=131, Expect=3e-34]} {Smed: dd_Smed_v6_3176_0_1, dd_Smed_v6_3176_0_1, [Score=134, Expect=2e-35]} {RNA1509_20592, RNA1509_42730, RNA1509_44608} {RNA1310_16346.1, RNA1509_20592, RNA1509_42730, RNA1509_44608} {RNA1509_20592, RNA1509_42730, RNA1509_44608, RNA815_39485}
3.	MligTC455_37232	150	3.12	Mlig455_059380	Neo: - Age: Down-Up-Down		0.952	-	-	-	-	0.952	-	Mlig455_059380 {REF} {Length: 1630} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=32.7]; Prokaryotic RING finger family 4 [PF14447.8, score=19.8]} {RNA1509_38154} {RNA1310_11898.1} {RNA815_18631}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_47507

202

4.2

Mlig455_015950, Mlig455_059717

Neo: -

Age: -

Region-enriched R4: 2.654/0.01994

1.000

Mlig455_015950 {REF} {Length: 1452} {Pfam: Thymosin beta-4 family [PF01290.22, score=20.4]} {RNA1509_27585, RNA1509_48356} {RNA1310_37960, RNA1509_48356} {RNA1509_48356, RNA815_19942}

Mlig455_059717 {REF} {Length: 1394} {Pfam: Thymosin beta-4 family [PF01290.22, score=20.4]} {RNA1509_27585} {RNA1310_37960} {RNA815_19942}

MligTC455_48774

173

3.6

Mlig455_004326

Neo: -

Age: Down-Up-Down

TCEA2

0.971

Mlig455_004326 {REF} {Length: 2346} {Pfam: Transcription factor S-II (TFIIS), central domain [PF07500.16, score=92.8]; Transcription factor S-II (TFIIS) [PF01096.20, score=46.7]; TFIIS helical bundle-like domain [PF08711.13, score=28.2]} {Human: ENSG00000171703, TCEA2, transcription elongation factor A2, [Score=160, Expect=2e-44]} {Mouse: ENSMUSG00000059540, Tcea2, transcription elongation factor A (SII), 2, [Score=164, Expect=3e-46]} {Dmel: FBgn0010422, TfIIS, RNA polymerase II elongation factor, [Score=153, Expect=3e-42]} {Celegans: WBGene00012000, T24H10.1, Putative transcription elongation factor S-II, [Score=131, Expect=3e-34]} {Smed: dd_Smed_v6_3176_0_1, dd_Smed_v6_3176_0_1, [Score=134, Expect=2e-35]} {RNA1509_20592, RNA1509_42730, RNA1509_44608} {RNA1310_16346.1, RNA1509_20592, RNA1509_42730, RNA1509_44608} {RNA1509_20592, RNA1509_42730, RNA1509_44608, RNA815_39485}

MligTC455_37232

150

3.12

Mlig455_059380

Neo: -

Age: Down-Up-Down

0.952

Mlig455_059380 {REF} {Length: 1630} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=32.7]; Prokaryotic RING finger family 4 [PF14447.8, score=19.8]} {RNA1509_38154} {RNA1310_11898.1} {RNA815_18631}