M. lignano Tomo-Seq
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Results for MligTC455_37262

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37262 141 2.93 Mlig455_020634

Neo: -

Age: -

 Mlig455_020634 {REF} {Length: 1702} {RNA1509_58758} {RNA1310_66307} {RNA815_948.1}

Cumulative graph for MligTC455_37262

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.901 2.203 0.61335 1.00000
RegionR2 0.19 2.203 0.80469 1.00000
RegionR3 -0.683 2.203 0.27128 0.81570
RegionR4 -0.909 2.203 0.23388 0.52786
RegionR5 -0.664 2.203 0.21543 0.51453
RegionR6 -1.301 2.203 0.06478 0.47679
RegionR7 0.801 2.203 0.32942 0.96447
RegionR8 1.666 2.203 0.07308 0.51678

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.776 2.203 0.28101 0.98107
RegenerationR2 0.805 2.203 0.14658 0.57847
RegenerationR3 0.343 2.203 0.63382 0.92200
RegenerationR4 0.047 2.203 0.95204 1.00000
RegenerationR5 -0.07 2.203 0.90976 1.00000
RegenerationR6 1.484 2.203 0.05238 0.28666
RegenerationBL -1.245 2.203 0.24258 0.59609
RegenerationTP -2.038 2.203 0.04929 0.36428


Genes with expression patterns similar to MligTC455_37262

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37262 141 2.93 Mlig455_020634

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_020634 {REF} {Length: 1702} {RNA1509_58758} {RNA1310_66307} {RNA815_948.1}
2. MligTC455_23143 413 8.6 Mlig455_008087

Neo: -

Age: -

Region-enriched R2: 2.201/0.04155

 INSR 1.748 - - - 0.791 0.957 - Mlig455_008087 {REF} {Length: 5415} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=291.7]; Protein kinase domain [PF00069.27, score=128.3]; Receptor L domain [PF01030.26, score=118.3]; Furin-like cysteine rich region [PF00757.22, score=79.0]; Fibronectin type III domain [PF00041.23, score=43.3]; Growth factor receptor domain IV [PF14843.8, score=19.7]} {Human: ENSG00000171105, INSR, insulin receptor, [RH, Score=647, Expect=0.0]} {Mouse: ENSMUSG00000005534, Insr, insulin receptor, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0283499, InR, Insulin-like receptor, [RH, Score=333, Expect=9e-93]} {Celegans: WBGene00000898, daf-2, Insulin-like receptor Insulin-like receptor subunit alpha Insulin-like receptor subunit beta, [RH, Score=477, Expect=6e-141]} {Smed: dd_Smed_v6_9006_0_1, dd_Smed_v6_9006_0_1, [RH, Score=516, Expect=7e-158]} {RNA1509_32205, RNA1509_5152} {RNA1310_762.1, RNA1509_32205, RNA1509_5152} {RNA1509_32205, RNA1509_5152, RNA815_285.1}
3. MligTC455_47769 70 1.46 Mlig455_034062

Neo: -

Age: Down-Down-Up

 CHRNA6 0.958 - - - - 0.958 - Mlig455_034062 {REF} {Length: 2693} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=120.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=92.9]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=199, Expect=3e-57]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=195, Expect=8e-56]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=190, Expect=3e-54]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=200, Expect=6e-58]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=198, Expect=3e-57]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=193, Expect=1e-55]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=190, Expect=5e-54]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=206, Expect=2e-59]} {Celegans: WBGene00043066, acr-25, AcetylCholine Receptor, [Score=200, Expect=1e-57]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=195, Expect=4e-56]} {RNA1310_10964.1} {RNA815_16260.1}
4. MligTC455_18191 426 8.88 Mlig455_013109, Mlig455_013200

Neo: -

Age: -

 0.956 - - - - - 0.956

Mlig455_013109 {REF} {Length: 1736} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=49.6]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=28.1]; Anti-sigma-K factor rskA [PF10099.11, score=23.9]} {RNA1509_21728, RNA1509_53612} {RNA1310_31334.1, RNA1509_53612} {RNA1509_53612, RNA815_35876}

Mlig455_013200 {REF} {Length: 2209} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=49.6]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=27.8]; Anti-sigma-K factor rskA [PF10099.11, score=23.8]} {RNA1509_21728, RNA1509_43501} {RNA1310_31334.1, RNA1509_21728} {RNA1509_21728, RNA815_35876}
5. MligTC455_49014 544 11.33 Mlig455_006294

Neo: -

Age: -

 UBL3 0.953 - - - - - 0.953 Mlig455_006294 {REF} {Length: 2229} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=89.0]} {Human: ENSG00000122042, UBL3, ubiquitin like 3, [RH, Score=152, Expect=5e-48]} {Mouse: ENSMUSG00000001687, Ubl3, ubiquitin-like 3, [RH, Score=151, Expect=8e-48]} {Dmel: FBgn0026076, UBL3, Ubiquitin like 3, [Score=141, Expect=2e-41]} {Celegans: WBGene00008121, C46F11.6, Ubiquitin-like protein, [Score=115, Expect=7e-34]} {Smed: dd_Smed_v6_10574_0_1, dd_Smed_v6_10574_0_1, [Score=107, Expect=1e-30]} {RNA1509_29746, RNA1509_45031, RNA1509_49077} {RNA1310_53434, RNA1509_29746, RNA1509_45031, RNA1509_49077} {RNA1509_29746, RNA1509_45031, RNA1509_49077, RNA815_28925}
6. MligTC455_39952 315 6.57 Mlig455_040218

Neo: -

Age: -

 0.952 - - - 0.952 - - Mlig455_040218 {REF} {Length: 1140} {NoTransDecoderORF} {RNA1509_46890} {RNA1310_43516} {RNA815_33155}

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