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Results for MligTC455_37331

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37331 41 0.86 Mlig455_014563, Mlig455_035846, Mlig455_044984, Mlig455_044985, Mlig455_070481

Neo: -

Age: Up-Down-Up

 PIF1

Mlig455_014563 {REF} {Length: 759} {Pfam: Zinc knuckle [PF00098.25, score=22.5]} {RNA1310_55722}

Mlig455_035846 {REF} {Length: 563} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.7]} {RNA1310_55722}

Mlig455_044984 {REF} {Length: 401} {Pfam: PIF1-like helicase [PF05970.16, score=35.8]; AAA domain [PF13604.8, score=26.0]} {RNA1509_2607} {RNA1310_72.1} {RNA815_5517.1}

Mlig455_044985 {REF} {Length: 350} {Pfam: AAA ATPase domain [PF13191.8, score=21.5]} {RNA1509_7562} {RNA1310_72.1} {RNA815_5517.1}

Mlig455_070481 {REF} {Length: 5752} {Pfam: PIF1-like helicase [PF05970.16, score=94.1]; AAA domain [PF13604.8, score=62.3]; AAA domain [PF13245.8, score=36.3]; OTU-like cysteine protease [PF02338.21, score=22.5]; AAA ATPase domain [PF13191.8, score=19.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=119, Expect=1e-26]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=120, Expect=2e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=114, Expect=2e-25]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=112, Expect=3e-25]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=102, Expect=6e-22]} {RNA1509_2607} {RNA1310_72.1} {RNA815_5517.1}

Cumulative graph for MligTC455_37331

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.161 1.067 0.99961 1.00000
RegionR2 -1.152 1.067 0.98818 1.00000
RegionR3 0.337 1.067 0.81740 1.00000
RegionR4 3.447 1.067 0.09369 0.29453
RegionR5 0.429 1.067 0.71364 1.00000
RegionR6 -0.923 1.067 0.97030 1.00000
RegionR7 0.797 1.067 0.71304 1.00000
RegionR8 -3.098 1.067 0.99965 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.644 1.067 0.99955 1.00000
RegenerationR2 -2.493 1.067 0.06113 0.40616
RegenerationR3 -4.321 1.067 0.00503 0.12780
RegenerationR4 -2.292 1.067 0.13548 0.55484
RegenerationR5 -2.617 1.067 0.06488 0.40117
RegenerationR6 -1.377 1.067 0.31702 0.66436
RegenerationBL -2.547 1.067 0.99499 1.00000
RegenerationTP -3.807 1.067 0.99827 1.00000


Genes with expression patterns similar to MligTC455_37331

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37331 41 0.86 Mlig455_014563, Mlig455_035846, Mlig455_044984, Mlig455_044985, Mlig455_070481

Neo: -

Age: Up-Down-Up

 PIF1 4 1.000 - 1.000 1.000 1.000 -

Mlig455_014563 {REF} {Length: 759} {Pfam: Zinc knuckle [PF00098.25, score=22.5]} {RNA1310_55722}

Mlig455_035846 {REF} {Length: 563} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.7]} {RNA1310_55722}

Mlig455_044984 {REF} {Length: 401} {Pfam: PIF1-like helicase [PF05970.16, score=35.8]; AAA domain [PF13604.8, score=26.0]} {RNA1509_2607} {RNA1310_72.1} {RNA815_5517.1}

Mlig455_044985 {REF} {Length: 350} {Pfam: AAA ATPase domain [PF13191.8, score=21.5]} {RNA1509_7562} {RNA1310_72.1} {RNA815_5517.1}

Mlig455_070481 {REF} {Length: 5752} {Pfam: PIF1-like helicase [PF05970.16, score=94.1]; AAA domain [PF13604.8, score=62.3]; AAA domain [PF13245.8, score=36.3]; OTU-like cysteine protease [PF02338.21, score=22.5]; AAA ATPase domain [PF13191.8, score=19.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=119, Expect=1e-26]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=120, Expect=2e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=114, Expect=2e-25]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=112, Expect=3e-25]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=102, Expect=6e-22]} {RNA1509_2607} {RNA1310_72.1} {RNA815_5517.1}
2. MligTC455_41544 38 0.8 Mlig455_004081

Neo: -

Age: Up-Down-Up

 1.716 - - 0.969 - 0.747 - Mlig455_004081 {REF} {Length: 3551} {Pfam: F5/8 type C domain [PF00754.27, score=23.5]} {RNA1310_43457}
3. MligTC455_47316 92 1.91 Mlig455_048181

Neo: -

Age: logFC(26M/2M)=-0.686

 0.994 - - 0.994 - - - Mlig455_048181 {REF} {Length: 1869} {RNA1509_52985} {RNA1310_31050.1} {RNA815_38830}
4. MligTC455_53337 48 1.01 Mlig455_007511, Mlig455_067679

Neo: -

Age: -

 0.992 - - 0.992 - - -

Mlig455_007511 {REF} {Length: 3196} {Pfam: Immunoglobulin domain [PF13895.8, score=37.0]; Immunoglobulin domain [PF13927.8, score=23.5]} {RNA1509_58583} {RNA1310_50684.1} {RNA815_25388}

Mlig455_067679 {REF} {Length: 1900} {RNA1509_58583} {RNA1310_72577} {RNA815_25388}
5. MligTC455_22376 11 0.24 Mlig455_053519

Neo: -

Age: -

 0.989 - - 0.989 - - - Mlig455_053519 {REF} {Length: 1000} {RNA1509_59906} {RNA1310_29774.1} {RNA815_14384.2}
6. MligTC455_46709 141 2.93 Mlig455_004054

Neo: -

Age: logFC(26M/2M)=-0.436

 XPR1 0.986 - - 0.986 - - - Mlig455_004054 {REF} {Length: 4347} {TRANSSPLICED} {Pfam: EXS family [PF03124.16, score=309.4]; SPX domain [PF03105.21, score=89.2]} {Human: ENSG00000143324, XPR1, xenotropic and polytropic retrovirus receptor 1, [RH, Score=552, Expect=0.0]} {Mouse: ENSMUSG00000026469, Xpr1, xenotropic and polytropic retrovirus receptor 1, [RH, Score=542, Expect=0.0]} {Dmel: FBgn0035649, CG10483, [RH, Score=577, Expect=0.0]} {Celegans: WBGene00012659, Y39A1A.22, [RH, Score=522, Expect=4e-176]} {Smed: dd_Smed_v6_5170_0_1, dd_Smed_v6_5170_0_1, [RH, Score=608, Expect=0.0]} {RNA1509_5265} {RNA1310_3808} {RNA815_2124}
7. MligTC455_19893 77 1.59 Mlig455_033319

Neo: -

Age: -

 0.983 - - 0.983 - - - Mlig455_033319 {REF} {Length: 534} {NoTransDecoderORF} {RNA1509_46670} {RNA1310_84118} {RNA815_60581}
8. MligTC455_44220 119 2.49 Mlig455_053870

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.322

Region-enriched R8: 4.672/0.00316

Regeneration-depleted BL: -8.794
Regeneration-depleted TP: -7.962

 CDH23 0.975 - - 0.975 - - - Mlig455_053870 {REF} {Length: 7139} {Pfam: Cadherin domain [PF00028.19, score=356.1]; Cadherin-like [PF08266.14, score=28.2]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=370, Expect=4e-103]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=372, Expect=6e-104]} {Dmel: FBgn0038247, Cad88C, Cadherin 88C, [Score=434, Expect=2e-124]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=240, Expect=2e-63]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=522, Expect=3e-155]} {RNA1509_44173, RNA1509_9298} {RNA1310_449.1, RNA1509_44173} {RNA1509_44173, RNA815_181}
9. MligTC455_17153 99 2.07 Mlig455_012529

Neo: -

Age: -

 CD63 0.969 - - 0.969 - - - Mlig455_012529 {REF} {Length: 1590} {Pfam: Tetraspanin family [PF00335.22, score=91.4]} {Human: ENSG00000135404, CD63, CD63 molecule, [RH, Score=83.2, Expect=2e-19]} {Mouse: ENSMUSG00000058254, Tspan7, tetraspanin 7, [Score=60.8, Expect=1e-10]} {Dmel: FBgn0033129, Tsp42Eh, Tetraspanin 42Eh, [Score=51.6, Expect=1e-07]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [Score=59.7, Expect=1e-10]} {Smed: dd_Smed_v6_6981_0_1, dd_Smed_v6_6981_0_1, [RH, Score=115, Expect=2e-31]} {RNA1509_52202} {RNA1310_38549} {RNA815_11397}
10. MligTC455_46061 16 0.33 Mlig455_044284

Neo: -

Age: -

 0.969 - - 0.969 - - - Mlig455_044284 {REF} {Length: 647} {RNA1310_48056} {RNA815_59483}
11. MligTC455_33741 37 0.78 Mlig455_044429, Mlig455_044463, Mlig455_046755

Neo: -

Age: -

 CLK2, CLK3 0.964 - - 0.964 - - -

Mlig455_044429 {REF} {Length: 2988} {Pfam: Protein kinase domain [PF00069.27, score=166.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.7]} {Human: ENSG00000176444, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000261893, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=444, Expect=1e-148]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=460, Expect=4e-157]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=442, Expect=3e-148]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=480, Expect=2e-151]} {Celegans: WBGene00006517, madd-3, [Score=416, Expect=1e-141]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [Score=496, Expect=2e-168]} {RNA1509_52185} {RNA1310_8105} {RNA815_38317}

Mlig455_044463 {REF} {Length: 3058} {Pfam: Protein kinase domain [PF00069.27, score=166.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.6]} {Human: ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=437, Expect=6e-146]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=456, Expect=2e-155]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=436, Expect=1e-145]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=465, Expect=6e-158]} {Celegans: WBGene00006517, madd-3, [Score=414, Expect=9e-141]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [Score=488, Expect=7e-165]} {RNA1509_52185} {RNA1310_8105, RNA1509_52185} {RNA1509_52185, RNA815_38317}

Mlig455_046755 {REF} {Length: 2356} {Pfam: Protein kinase domain [PF00069.27, score=166.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.7]} {Human: ENSG00000176444, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000261893, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=444, Expect=1e-148]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=460, Expect=4e-157]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=442, Expect=3e-148]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=480, Expect=2e-151]} {Celegans: WBGene00006517, madd-3, [Score=416, Expect=1e-141]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [Score=496, Expect=2e-168]} {RNA1509_52185} {RNA1310_8105} {RNA815_38317}
12. MligTC455_18492 32 0.68 Mlig455_026506

Neo: -

Age: -

 ADRA1B 0.963 - - 0.963 - - - Mlig455_026506 {REF} {Length: 1747} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=271.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=40.7]} {Human: ENSG00000170214, ADRA1B, adrenoceptor alpha 1B, [Score=244, Expect=8e-74]} {Mouse: ENSMUSG00000050541, Adra1b, adrenergic receptor, alpha 1b, [Score=242, Expect=3e-73]} {Dmel: FBgn0266137, Dop1R2, Dopamine 1-like receptor 2, [RH, Score=310, Expect=2e-96]} {Celegans: WBGene00004777, ser-2, Tyramine receptor Ser-2, [Score=196, Expect=4e-57]} {Smed: dd_Smed_v6_22802_0_1, dd_Smed_v6_22802_0_1, [RH, Score=325, Expect=9e-107]} {RNA1310_108893}
13. MligTC455_07448 149 3.1 Mlig455_008337

Neo: -

Age: logFC(26M/2M)=0.836

Regeneration-downregulated R6: -5.322

Regeneration-depleted R6: -5.322

 P4HB 0.959 - - 0.959 - - - Mlig455_008337 {REF} {Length: 2743} {Pfam: Thioredoxin [PF00085.22, score=188.0]; Thioredoxin-like domain [PF13848.8, score=134.3]; Thioredoxin-like domain [PF13098.8, score=56.7]; Thioredoxin-like [PF13899.8, score=48.1]; OST3 / OST6 family, transporter family [PF04756.15, score=40.2]; AhpC/TSA family [PF00578.23, score=37.4]; Thioredoxin-like [PF13905.8, score=37.3]; Calsequestrin [PF01216.19, score=31.5]; ERp29, N-terminal domain [PF07912.15, score=28.3]; Redoxin [PF08534.12, score=23.6]; Thioredoxin domain [PF13192.8, score=21.3]; F plasmid transfer operon protein [PF13728.8, score=20.8]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [Score=496, Expect=3e-172]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [Score=492, Expect=4e-171]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [Score=444, Expect=2e-152]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [Score=478, Expect=7e-166]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [Score=514, Expect=3e-180]} {RNA1509_31469} {RNA1310_14305} {RNA815_2552.1}
14. MligTC455_12218 52 1.09 Mlig455_052016, Mlig455_057235

Neo: -

Age: -

 0.952 - - 0.952 - - -

Mlig455_052016 {REF} {Length: 613} {NoTransDecoderORF} {RNA1310_25612} {RNA815_28323}

Mlig455_057235 {REF} {Length: 1053} {NoTransDecoderORF} {RNA1310_25612} {RNA815_28323}

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