M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_44220

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44220 119 2.49 Mlig455_053870

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.322

Region-enriched R8: 4.672/0.00316

Regeneration-depleted BL: -8.794
Regeneration-depleted TP: -7.962

 CDH23 Mlig455_053870 {REF} {Length: 7139} {Pfam: Cadherin domain [PF00028.19, score=356.1]; Cadherin-like [PF08266.14, score=28.2]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=370, Expect=4e-103]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=372, Expect=6e-104]} {Dmel: FBgn0038247, Cad88C, Cadherin 88C, [Score=434, Expect=2e-124]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=240, Expect=2e-63]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=522, Expect=3e-155]} {RNA1509_44173, RNA1509_9298} {RNA1310_449.1, RNA1509_44173} {RNA1509_44173, RNA815_181}

Cumulative graph for MligTC455_44220

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.536 1.619 0.60038 1.00000
RegionR2 1.485 1.619 0.16440 0.50774
RegionR3 -0.364 1.619 0.65649 1.00000
RegionR4 -3.355 1.619 0.02693 0.12577
RegionR5 -4.912 1.619 0.00000 0.00002
RegionR6 -1.159 1.619 0.22673 0.80869
RegionR7 2.097 1.619 0.04106 0.38810
RegionR8 4.672 1.619 0.00003 0.00316

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.913 1.619 0.21783 0.95391
RegenerationR2 -2.875 1.619 0.00418 0.09953
RegenerationR3 -3.393 1.619 0.00655 0.14700
RegenerationR4 -1.151 1.619 0.30361 0.74523
RegenerationR5 -0.96 1.619 0.39226 0.79390
RegenerationR6 -2.5 1.619 0.03284 0.22622
RegenerationBL -8.794 1.619 0.00008 0.00396
RegenerationTP -7.962 1.619 0.00004 0.00680


Genes with expression patterns similar to MligTC455_44220

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44220 119 2.49 Mlig455_053870

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.322

Region-enriched R8: 4.672/0.00316

Regeneration-depleted BL: -8.794
Regeneration-depleted TP: -7.962

 CDH23 4 1.000 1.000 1.000 - 1.000 - Mlig455_053870 {REF} {Length: 7139} {Pfam: Cadherin domain [PF00028.19, score=356.1]; Cadherin-like [PF08266.14, score=28.2]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=370, Expect=4e-103]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=372, Expect=6e-104]} {Dmel: FBgn0038247, Cad88C, Cadherin 88C, [Score=434, Expect=2e-124]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=240, Expect=2e-63]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=522, Expect=3e-155]} {RNA1509_44173, RNA1509_9298} {RNA1310_449.1, RNA1509_44173} {RNA1509_44173, RNA815_181}
2. MligTC455_54070 186 3.88 Mlig455_067817

Neo: -

Age: -

Region-enriched R8: 3.779/0.00038

 OTOF 2.484 0.969 0.770 - - 0.745 - Mlig455_067817 {REF} {Length: 8297} {Pfam: C2 domain [PF00168.32, score=144.2]; FerB (NUC096) domain [PF08150.14, score=94.3]; FerI (NUC094) domain [PF08151.14, score=59.3]} {Human: ENSG00000115155, OTOF, otoferlin, [Score=829, Expect=0.0]} {Mouse: ENSMUSG00000062372, Otof, otoferlin, [Score=834, Expect=0.0]} {Dmel: FBgn0266757, mfr, misfire, [Score=114, Expect=3e-25]} {Celegans: WBGene00001414, fer-1, Sperm vesicle fusion protein fer-1, [Score=84.3, Expect=6e-16]} {Smed: dd_Smed_v6_5915_0_1, dd_Smed_v6_5915_0_1, [Score=1263, Expect=0.0]} {RNA1509_37008} {RNA1310_908.1} {RNA815_16140}
3. MligTC455_43506 73 1.53 Mlig455_006107

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.595

 1.903 - - 0.942 - 0.961 - Mlig455_006107 {REF} {Length: 703} {RNA1509_17222} {RNA1310_44913.1} {RNA815_37256}
4. MligTC455_51159 49 1.03 Mlig455_068260

Neo: -

Age: -

 SSPO 1.858 0.951 - 0.907 - - - Mlig455_068260 {REF} {Length: 3064} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=45.9]; C8 domain [PF08742.13, score=40.0]; von Willebrand factor type D domain [PF00094.27, score=26.1]} {Human: ENSG00000197558, SSPO, SCO-spondin, [Score=125, Expect=4e-29]} {Mouse: ENSMUSG00000029797, Sspo, SCO-spondin, [Score=115, Expect=6e-26]} {Dmel: FBgn0029167, Hml, Hemolectin, [Score=87.4, Expect=2e-17]} {Celegans: WBGene00003072, lrp-2, Low-density lipoprotein RecePtor related, [Score=61.6, Expect=2e-09]} {Smed: dd_Smed_v6_9342_0_1, dd_Smed_v6_9342_0_1, [Score=141, Expect=8e-35]} {RNA1509_32065} {RNA1310_11674.1} {RNA815_35239}
5. MligTC455_18492 32 0.68 Mlig455_026506

Neo: -

Age: -

 ADRA1B 1.845 - - 0.956 - 0.889 - Mlig455_026506 {REF} {Length: 1747} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=271.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=40.7]} {Human: ENSG00000170214, ADRA1B, adrenoceptor alpha 1B, [Score=244, Expect=8e-74]} {Mouse: ENSMUSG00000050541, Adra1b, adrenergic receptor, alpha 1b, [Score=242, Expect=3e-73]} {Dmel: FBgn0266137, Dop1R2, Dopamine 1-like receptor 2, [RH, Score=310, Expect=2e-96]} {Celegans: WBGene00004777, ser-2, Tyramine receptor Ser-2, [Score=196, Expect=4e-57]} {Smed: dd_Smed_v6_22802_0_1, dd_Smed_v6_22802_0_1, [RH, Score=325, Expect=9e-107]} {RNA1310_108893}
6. MligTC455_45987 1592 33.17 Mlig455_024379, Mlig455_024495

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.664

Region-specific R8: 3.405

Region-enriched R8: 3.716/0.00000
Region-enriched R7: 2.383/0.00000

Regeneration-depleted BL: -2.612
Regeneration-depleted TP: -2.566

 PKDREJ 1.777 0.959 0.818 - - - -

Mlig455_024379 {REF} {Length: 9101} {Pfam: PKD domain [PF18911.2, score=34.9]; PKD domain [PF00801.22, score=21.5]} {RNA1509_1257} {RNA1310_126.1} {RNA815_58}

Mlig455_024495 {REF} {Length: 8484} {Pfam: Polycystin cation channel [PF08016.14, score=333.9]; PLAT/LH2 domain [PF01477.25, score=69.5]; PKD domain [PF18911.2, score=32.8]; Ion transport protein [PF00520.33, score=31.6]; PKD domain [PF00801.22, score=19.8]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [RH, Score=346, Expect=8e-95]} {Mouse: ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [RH, Score=327, Expect=4e-89]; ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [RH, Score=319, Expect=7e-87]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=167, Expect=3e-41]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=198, Expect=3e-52]} {Smed: dd_Smed_v6_10962_0_1, dd_Smed_v6_10962_0_1, [Score=592, Expect=9e-172]} {RNA1509_1257} {RNA1310_126.1} {RNA815_58}
7. MligTC455_30850 34 0.71 Mlig455_019341, Mlig455_019556

Neo: -

Age: logFC(26M/2M)=-0.625

 GRIK2, GRIK4 1.759 0.956 - - - 0.803 -

Mlig455_019341 {REF} {Length: 3886} {Pfam: Ligand-gated ion channel [PF00060.28, score=95.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=54.6]; Receptor family ligand binding region [PF01094.30, score=53.8]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=24.1]; Iron-containing alcohol dehydrogenase [PF13685.8, score=22.3]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=160, Expect=8e-40]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=157, Expect=6e-39]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=152, Expect=3e-37]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=160, Expect=4e-40]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=155, Expect=2e-38]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=153, Expect=6e-38]} {Dmel: FBgn0039927, CG11155, [Score=179, Expect=3e-46]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=136, Expect=1e-32]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=257, Expect=5e-78]} {RNA1509_10728} {RNA1310_122.1} {RNA815_8415.1}

Mlig455_019556 {REF} {Length: 4135} {Pfam: Ligand-gated ion channel [PF00060.28, score=96.3]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=54.5]; Receptor family ligand binding region [PF01094.30, score=39.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=24.1]; Iron-containing alcohol dehydrogenase [PF13685.8, score=19.4]} {Human: ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=155, Expect=3e-38]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=150, Expect=8e-37]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=149, Expect=2e-36]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=154, Expect=5e-38]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=149, Expect=1e-36]; ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=149, Expect=1e-36]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=147, Expect=4e-36]} {Dmel: FBgn0039927, CG11155, [Score=169, Expect=3e-43]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=136, Expect=1e-32]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=259, Expect=1e-78]} {RNA1509_10728} {RNA1310_31364} {RNA815_8415.1}
8. MligTC455_42157 340 7.09 Mlig455_025121

Neo: -

Age: -

 1.745 0.955 0.790 - - - - Mlig455_025121 {REF} {Length: 5069} {Smed: dd_Smed_v6_4268_0_1, dd_Smed_v6_4268_0_1, [RH, Score=76.6, Expect=7e-16]} {RNA1509_57041, RNA1509_57438} {RNA1310_30507, RNA1509_57041} {RNA1509_57041, RNA815_19089}
9. MligTC455_14757 726 15.12 Mlig455_043399, Mlig455_043416, Mlig455_043559, Mlig455_043567

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.347

Region-specific R8: 6.849

Region-enriched R8: 6.705/0.00000
Region-enriched R7: 2.897/0.00199

Regeneration-downregulated BL: -8.524

Regeneration-depleted BL: -8.524

 1.73 0.966 0.764 - - - -

Mlig455_043399 {REF} {Length: 5997} {Dmel: FBgn0010434, cora, coracle, [Score=80.5, Expect=1e-14]} {RNA1509_17394} {RNA1310_20597} {RNA815_24724}

Mlig455_043416 {REF} {Length: 6138} {RNA1509_17394} {RNA1310_20597} {RNA815_24724}

Mlig455_043559 {REF} {Length: 7159} {RNA1509_17394} {RNA1310_38694} {RNA815_21047}

Mlig455_043567 {REF} {Length: 8454} {Dmel: FBgn0010434, cora, coracle, [Score=51.6, Expect=3e-06]} {RNA1509_17394} {RNA1310_20597} {RNA815_24724}
10. MligTC455_17153 99 2.07 Mlig455_012529

Neo: -

Age: -

 CD63 1.678 - - 0.970 - 0.708 - Mlig455_012529 {REF} {Length: 1590} {Pfam: Tetraspanin family [PF00335.22, score=91.4]} {Human: ENSG00000135404, CD63, CD63 molecule, [RH, Score=83.2, Expect=2e-19]} {Mouse: ENSMUSG00000058254, Tspan7, tetraspanin 7, [Score=60.8, Expect=1e-10]} {Dmel: FBgn0033129, Tsp42Eh, Tetraspanin 42Eh, [Score=51.6, Expect=1e-07]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [Score=59.7, Expect=1e-10]} {Smed: dd_Smed_v6_6981_0_1, dd_Smed_v6_6981_0_1, [RH, Score=115, Expect=2e-31]} {RNA1509_52202} {RNA1310_38549} {RNA815_11397}
11. MligTC455_13708 164 3.41 Mlig455_058918, Mlig455_058920

Neo: -

Age: -

 1.672 - 0.963 - - 0.709 -

Mlig455_058918 {REF} {Length: 695} {NoTransDecoderORF} {RNA1310_33077}

Mlig455_058920 {REF} {Length: 663} {NoTransDecoderORF} {RNA1310_33077}
12. MligTC455_31544 54 1.13 Mlig455_019284

Neo: -

Age: Up-Down-Up

 0.988 - - 0.988 - - - Mlig455_019284 {REF} {Length: 2664} {RNA1509_26962} {RNA1310_7663} {RNA815_9340}
13. MligTC455_27472 133 2.77 Mlig455_009912

Neo: -

Age: logFC(26M/2M)=-0.500

Region-enriched R8: 4.558/0.00009
Region-enriched R7: 2.820/0.04918

 ANK1 0.979 0.979 - - - - - Mlig455_009912 {REF} {Length: 4603} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=223.1]; Ankyrin repeat [PF00023.32, score=210.6]; Ankyrin repeats (many copies) [PF13637.8, score=152.3]; Ankyrin repeat [PF13606.8, score=151.1]; Ankyrin repeats (many copies) [PF13857.8, score=122.9]; Glutamine amidotransferase domain [PF13537.8, score=29.6]; Mab-21 protein [PF03281.16, score=29.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=194, Expect=1e-49]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=183, Expect=2e-46]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=181, Expect=9e-46]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=177, Expect=2e-44]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=171, Expect=1e-44]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=177, Expect=1e-44]} {Smed: dd_Smed_v6_2072_0_4, dd_Smed_v6_2072_0_4, [Score=187, Expect=5e-48]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}
14. MligTC455_22376 11 0.24 Mlig455_053519

Neo: -

Age: -

 0.977 - - 0.977 - - - Mlig455_053519 {REF} {Length: 1000} {RNA1509_59906} {RNA1310_29774.1} {RNA815_14384.2}
15. MligTC455_37331 41 0.86 Mlig455_014563, Mlig455_035846, Mlig455_044984, Mlig455_044985, Mlig455_070481

Neo: -

Age: Up-Down-Up

 PIF1 0.975 - - 0.975 - - -

Mlig455_014563 {REF} {Length: 759} {Pfam: Zinc knuckle [PF00098.25, score=22.5]} {RNA1310_55722}

Mlig455_035846 {REF} {Length: 563} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.7]} {RNA1310_55722}

Mlig455_044984 {REF} {Length: 401} {Pfam: PIF1-like helicase [PF05970.16, score=35.8]; AAA domain [PF13604.8, score=26.0]} {RNA1509_2607} {RNA1310_72.1} {RNA815_5517.1}

Mlig455_044985 {REF} {Length: 350} {Pfam: AAA ATPase domain [PF13191.8, score=21.5]} {RNA1509_7562} {RNA1310_72.1} {RNA815_5517.1}

Mlig455_070481 {REF} {Length: 5752} {Pfam: PIF1-like helicase [PF05970.16, score=94.1]; AAA domain [PF13604.8, score=62.3]; AAA domain [PF13245.8, score=36.3]; OTU-like cysteine protease [PF02338.21, score=22.5]; AAA ATPase domain [PF13191.8, score=19.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=119, Expect=1e-26]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=120, Expect=2e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=114, Expect=2e-25]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=112, Expect=3e-25]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=102, Expect=6e-22]} {RNA1509_2607} {RNA1310_72.1} {RNA815_5517.1}
16. MligTC455_52983 56 1.16 Mlig455_051283

Neo: -

Age: -

 0.974 - - - - 0.974 - Mlig455_051283 {REF} {Length: 785} {NoTransDecoderORF} {RNA1509_10121} {RNA1310_96060} {RNA815_42566}
17. MligTC455_06800 94 1.96 Mlig455_036964, Mlig455_069813

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.095

 0.971 - - 0.971 - - -

Mlig455_036964 {REF} {Length: 428} {NoTransDecoderORF} {RNA1509_58021} {RNA1310_98977} {RNA815_51185}

Mlig455_069813 {REF} {Length: 1375} {NoTransDecoderORF} {RNA1509_58021} {RNA1310_98977, RNA1509_58021} {RNA1509_58021, RNA815_51185}
18. MligTC455_07448 149 3.1 Mlig455_008337

Neo: -

Age: logFC(26M/2M)=0.836

Regeneration-downregulated R6: -5.322

Regeneration-depleted R6: -5.322

 P4HB 0.97 - - 0.970 - - - Mlig455_008337 {REF} {Length: 2743} {Pfam: Thioredoxin [PF00085.22, score=188.0]; Thioredoxin-like domain [PF13848.8, score=134.3]; Thioredoxin-like domain [PF13098.8, score=56.7]; Thioredoxin-like [PF13899.8, score=48.1]; OST3 / OST6 family, transporter family [PF04756.15, score=40.2]; AhpC/TSA family [PF00578.23, score=37.4]; Thioredoxin-like [PF13905.8, score=37.3]; Calsequestrin [PF01216.19, score=31.5]; ERp29, N-terminal domain [PF07912.15, score=28.3]; Redoxin [PF08534.12, score=23.6]; Thioredoxin domain [PF13192.8, score=21.3]; F plasmid transfer operon protein [PF13728.8, score=20.8]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [Score=496, Expect=3e-172]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [Score=492, Expect=4e-171]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [Score=444, Expect=2e-152]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [Score=478, Expect=7e-166]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [Score=514, Expect=3e-180]} {RNA1509_31469} {RNA1310_14305} {RNA815_2552.1}
19. MligTC455_19934 704 14.66 Mlig455_001454

Neo: -

Age: -

Region-enriched R8: 4.340/0.00000
Region-enriched R7: 3.938/0.00000
Region-enriched R6: 1.934/0.02993

 HOXA10 0.97 0.970 - - - - - Mlig455_001454 {REF} {Length: 2331} {Pfam: Homeodomain [PF00046.31, score=71.5]; Protein of unknown function (DUF2722) [PF10846.10, score=21.4]; Anti-sigma-K factor rskA [PF10099.11, score=20.2]} {Human: ENSG00000253293, HOXA10, homeobox A10, [RH, Score=97.4, Expect=1e-21]; ENSG00000128713, HOXD11, homeobox D11, [RH, Score=95.5, Expect=2e-21]; ENSG00000170178, HOXD12, homeobox D12, [RH, Score=95.1, Expect=9e-22]; ENSG00000123407, HOXC12, homeobox C12, [RH, Score=94.7, Expect=2e-21]; ENSG00000180818, HOXC10, homeobox C10, [RH, Score=94.4, Expect=6e-21]; ENSG00000005073, HOXA11, homeobox A11, [RH, Score=92.8, Expect=2e-20]; ENSG00000128710, HOXD10, homeobox D10, [RH, Score=92.8, Expect=2e-20]} {Mouse: ENSMUSG00000000938, Hoxa10, homeobox A10, [RH, Score=97.8, Expect=5e-22]; ENSMUSG00000042499, Hoxd11, homeobox D11, [RH, Score=95.9, Expect=1e-21]; ENSMUSG00000050328, Hoxc12, homeobox C12, [RH, Score=94.7, Expect=1e-21]; ENSMUSG00000022484, Hoxc10, homeobox C10, [RH, Score=94.4, Expect=5e-21]; ENSMUSG00000001823, Hoxd12, homeobox D12, [RH, Score=94.4, Expect=1e-21]; ENSMUSG00000050368, Hoxd10, homeobox D10, [RH, Score=93.2, Expect=1e-20]} {Dmel: FBgn0000015, Abd-B, Abdominal B, [RH, Score=106, Expect=7e-25]} {Celegans: WBGene00004024, php-3, Posterior Hox gene Paralog, [RH, Score=104, Expect=2e-25]} {Smed: dd_Smed_v6_9061_0_1, dd_Smed_v6_9061_0_1, [RH, Score=132, Expect=2e-34]} {RNA1509_50329} {RNA1310_36793} {RNA815_27715}
20. MligTC455_53337 48 1.01 Mlig455_007511, Mlig455_067679

Neo: -

Age: -

 0.969 - - 0.969 - - -

Mlig455_007511 {REF} {Length: 3196} {Pfam: Immunoglobulin domain [PF13895.8, score=37.0]; Immunoglobulin domain [PF13927.8, score=23.5]} {RNA1509_58583} {RNA1310_50684.1} {RNA815_25388}

Mlig455_067679 {REF} {Length: 1900} {RNA1509_58583} {RNA1310_72577} {RNA815_25388}
21. MligTC455_06948 11 0.23 Mlig455_043252

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_043252 {REF} {Length: 734} {TRANSSPLICED} {RNA1509_49118} {RNA1310_24738.1} {RNA815_3785.1}
22. MligTC455_24548 39 0.8 Mlig455_031981

Neo: -

Age: -

 ROBO1 0.968 - - - - 0.968 - Mlig455_031981 {REF} {Length: 4163} {Pfam: Immunoglobulin domain [PF13927.8, score=128.2]; Immunoglobulin I-set domain [PF07679.18, score=115.2]; Immunoglobulin domain [PF00047.27, score=78.6]; Immunoglobulin V-set domain [PF07686.19, score=73.6]; Immunoglobulin domain [PF13895.8, score=71.9]; Fibronectin type III domain [PF00041.23, score=22.4]} {Human: ENSG00000169855, ROBO1, roundabout guidance receptor 1, [Score=164, Expect=3e-40]} {Mouse: ENSMUSG00000032128, Robo3, roundabout guidance receptor 3, [Score=133, Expect=6e-31]} {Dmel: FBgn0005631, robo1, roundabout 1, [Score=139, Expect=4e-33]} {Celegans: WBGene00004729, sax-3, [Score=132, Expect=6e-31]} {Smed: dd_Smed_v6_8494_0_1, dd_Smed_v6_8494_0_1, [Score=239, Expect=1e-64]} {RNA1310_122847} {RNA815_62158}
23. MligTC455_35769 90 1.87 Mlig455_034140, Mlig455_050376, Mlig455_062180

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-1.028

 0.968 - - - - 0.968 -

Mlig455_034140 {REF} {Length: 1714} {RNA1509_25690} {RNA1310_57234} {RNA815_17883}

Mlig455_050376 {REF} {Length: 2093} {TRANSSPLICED} {RNA1509_54944} {RNA1310_23258} {RNA815_47172}

Mlig455_062180 {REF} {Length: 90} {NoTransDecoderORF} {RNA1509_25690} {RNA1310_65891} {RNA815_17883}
24. MligTC455_49877 188 3.91 Mlig455_027465

Neo: -

Age: -

Region-enriched R2: 3.005/0.04141

 AC254952.1 0.968 - 0.968 - - - - Mlig455_027465 {REF} {Length: 2059} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=89.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=80.0]} {Human: ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=145, Expect=6e-38]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=144, Expect=1e-37]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=144, Expect=1e-37]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=144, Expect=9e-38]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=141, Expect=2e-36]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=141, Expect=1e-36]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=141, Expect=6e-37]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=139, Expect=5e-36]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=134, Expect=2e-34]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=132, Expect=4e-33]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=126, Expect=6e-32]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=131, Expect=2e-33]} {RNA1310_26175} {RNA815_7952}
25. MligTC455_47316 92 1.91 Mlig455_048181

Neo: -

Age: logFC(26M/2M)=-0.686

 0.967 - - 0.967 - - - Mlig455_048181 {REF} {Length: 1869} {RNA1509_52985} {RNA1310_31050.1} {RNA815_38830}
26. MligTC455_46709 141 2.93 Mlig455_004054

Neo: -

Age: logFC(26M/2M)=-0.436

 XPR1 0.966 - - 0.966 - - - Mlig455_004054 {REF} {Length: 4347} {TRANSSPLICED} {Pfam: EXS family [PF03124.16, score=309.4]; SPX domain [PF03105.21, score=89.2]} {Human: ENSG00000143324, XPR1, xenotropic and polytropic retrovirus receptor 1, [RH, Score=552, Expect=0.0]} {Mouse: ENSMUSG00000026469, Xpr1, xenotropic and polytropic retrovirus receptor 1, [RH, Score=542, Expect=0.0]} {Dmel: FBgn0035649, CG10483, [RH, Score=577, Expect=0.0]} {Celegans: WBGene00012659, Y39A1A.22, [RH, Score=522, Expect=4e-176]} {Smed: dd_Smed_v6_5170_0_1, dd_Smed_v6_5170_0_1, [RH, Score=608, Expect=0.0]} {RNA1509_5265} {RNA1310_3808} {RNA815_2124}
27. MligTC455_20956 77 1.6 Mlig455_008761

Neo: -

Age: Up-Down-Down

Region-enriched R8: 3.712/0.03504

 GLRA3 0.965 0.965 - - - - - Mlig455_008761 {REF} {Length: 3739} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=146.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=124.8]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [RH, Score=344, Expect=7e-114]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [RH, Score=338, Expect=2e-111]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [RH, Score=342, Expect=5e-113]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [RH, Score=336, Expect=7e-111]} {Dmel: FBgn0024963, GluClalpha, [RH, Score=291, Expect=2e-93]} {Celegans: WBGene00001593, glc-3, Glutamate-gated ChLoride channel; Glutamate-gated chloride channel subunit, [RH, Score=256, Expect=7e-80]} {Smed: dd_Smed_v6_10794_0_1, dd_Smed_v6_10794_0_1, [Score=253, Expect=1e-78]} {RNA1310_38552.1} {RNA815_6481}
28. MligTC455_27571 65 1.36 Mlig455_035134

Neo: -

Age: logFC(26M/2M)=-0.443

Region-enriched R7: 3.058/0.04041

Regeneration-downregulated TP: -8.493

Regeneration-depleted TP: -8.493

 ANK1 0.964 0.964 - - - - - Mlig455_035134 {REF} {Length: 4051} {Pfam: Ankyrin repeat [PF00023.32, score=192.6]; Ankyrin repeats (3 copies) [PF12796.9, score=186.4]; Ankyrin repeat [PF13606.8, score=143.1]; Ankyrin repeats (many copies) [PF13637.8, score=131.9]; Ankyrin repeats (many copies) [PF13857.8, score=129.4]; Mab-21 protein [PF03281.16, score=28.2]; Glutamine amidotransferase domain [PF13537.8, score=28.0]; PEGA domain [PF08308.13, score=20.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=183, Expect=3e-46]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=179, Expect=2e-45]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=173, Expect=2e-43]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=172, Expect=3e-43]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=179, Expect=1e-45]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}
29. MligTC455_24525 354 7.37 Mlig455_007869

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R2: 2.053/0.02539

 MAST1 0.963 - - - - 0.963 - Mlig455_007869 {REF} {Length: 5535} {Pfam: Domain of unknown function (DUF1908) [PF08926.13, score=296.2]; Protein kinase domain [PF00069.27, score=197.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=82.3]; PDZ domain [PF17820.3, score=29.9]; PDZ domain [PF13180.8, score=23.9]; PDZ domain [PF00595.26, score=23.5]; ABC1 atypical kinase-like domain [PF03109.18, score=23.1]; Kinase-like [PF14531.8, score=18.9]} {Human: ENSG00000105613, MAST1, microtubule associated serine/threonine kinase 1, [RH, Score=696, Expect=0.0]; ENSG00000069020, MAST4, microtubule associated serine/threonine kinase family member 4, [RH, Score=687, Expect=0.0]; ENSG00000086015, MAST2, microtubule associated serine/threonine kinase 2, [RH, Score=675, Expect=0.0]} {Mouse: ENSMUSG00000053693, Mast1, microtubule associated serine/threonine kinase 1, [RH, Score=697, Expect=0.0]; ENSMUSG00000034751, Mast4, microtubule associated serine/threonine kinase family member 4, [RH, Score=682, Expect=0.0]; ENSMUSG00000003810, Mast2, microtubule associated serine/threonine kinase 2, [RH, Score=675, Expect=0.0]; ENSMUSG00000031833, Mast3, microtubule associated serine/threonine kinase 3, [RH, Score=664, Expect=0.0]; ENSMUSG00000110763, Mast3, microtubule associated serine/threonine kinase 3, [RH, Score=664, Expect=0.0]} {Dmel: FBgn0267390, dop, drop out, [RH, Score=510, Expect=3e-153]} {Celegans: WBGene00002192, kin-4, KIN-4 protein; Protein KINase, [RH, Score=563, Expect=8e-176]} {Smed: dd_Smed_v6_2028_0_1, dd_Smed_v6_2028_0_1, [RH, Score=682, Expect=0.0]} {RNA1509_37039} {RNA1310_2344.2, RNA1509_37039} {RNA1509_37039, RNA815_8686}
30. MligTC455_19211 107 2.23 Mlig455_052588

Neo: -

Age: -

Region-enriched R8: 3.795/0.01587

 0.962 0.962 - - - - - Mlig455_052588 {REF} {Length: 2340} {Celegans: WBGene00019180, H10D18.5, [RH, Score=62.4, Expect=6e-11]} {Smed: dd_Smed_v6_10251_0_1, dd_Smed_v6_10251_0_1, [RH, Score=95.9, Expect=2e-23]} {RNA1509_8096} {RNA1310_25906} {RNA815_14581.1}
31. MligTC455_22921 848 17.66 Mlig455_048030

Neo: -

Age: -

Region-enriched R8: 6.496/0.00000
Region-enriched R7: 5.319/0.00000

Regeneration-downregulated BL: -8.561

Regeneration-depleted BL: -8.561

 CNTNAP1 0.961 0.961 - - - - - Mlig455_048030 {REF} {Length: 2506} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=31.2]; Spondin-like TSP1 domain [PF19028.2, score=23.9]; Thrombospondin type 1 domain [PF19030.2, score=20.8]} {Human: ENSG00000108797, CNTNAP1, contactin associated protein 1, [Score=65.5, Expect=3e-11]} {Mouse: ENSMUSG00000017167, Cntnap1, contactin associated protein-like 1, [Score=69.3, Expect=1e-12]} {Dmel: FBgn0013997, Nrx-IV, Neurexin IV, [Score=63.5, Expect=6e-11]} {Celegans: WBGene00003772, nlr-1, Neurexin Like receptor, [Score=60.8, Expect=3e-10]} {Smed: dd_Smed_v6_2622_0_1, dd_Smed_v6_2622_0_1, [Score=70.5, Expect=2e-13]} {RNA1509_12135} {RNA1310_13292} {RNA815_6015.1}
32. MligTC455_39694 73 1.51 Mlig455_021504, Mlig455_067393

Neo: -

Age: -

 0.96 - 0.960 - - - -

Mlig455_021504 {REF} {Length: 1105} {Pfam: Chromatin assembly factor 1 complex p150 subunit, N-terminal [PF11600.10, score=25.0]} {Smed: dd_Smed_v6_2373_0_1, dd_Smed_v6_2373_0_1, [Score=70.9, Expect=4e-13]} {RNA1509_19671} {RNA1310_1157} {RNA815_38185}

Mlig455_067393 {REF} {Length: 3563} {Smed: dd_Smed_v6_2373_0_2, dd_Smed_v6_2373_0_2, [Score=112, Expect=4e-25]} {RNA1509_19671} {RNA1310_1157} {RNA815_36782}
33. MligTC455_06773 251 5.23 Mlig455_069732

Neo: -

Age: Down-Up-Down

 0.959 0.959 - - - - - Mlig455_069732 {REF} {Length: 1347} {RNA1310_24767.1} {RNA815_33473}
34. MligTC455_23517 847 17.64 Mlig455_027857

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.877

Region-enriched R8: 5.900/0.00000
Region-enriched R7: 4.915/0.00000

 TLL1 0.959 0.959 - - - - - Mlig455_027857 {REF} {Length: 1443} {Pfam: Astacin (Peptidase family M12A) [PF01400.26, score=138.1]} {Human: ENSG00000038295, TLL1, tolloid like 1, [Score=95.9, Expect=7e-22]} {Mouse: ENSMUSG00000053626, Tll1, tolloid-like, [Score=94.7, Expect=4e-21]} {Dmel: FBgn0037395, CG10280, [Score=102, Expect=1e-24]} {Celegans: WBGene00003534, nas-15, Zinc metalloproteinase nas-15, [Score=119, Expect=6e-30]} {Smed: dd_Smed_v6_345_0_1, dd_Smed_v6_345_0_1, [RH, Score=124, Expect=7e-34]} {RNA1509_35571} {RNA1310_3360.1} {RNA815_11450}
35. MligTC455_06772 238 4.96 Mlig455_048772

Neo: -

Age: -

Region-enriched R8: 6.268/0.00000
Region-enriched R7: 3.622/0.00419

 0.958 0.958 - - - - - Mlig455_048772 {REF} {Length: 839} {RNA1310_24767.2} {RNA815_33473}
36. MligTC455_13310 59 1.22 Mlig455_014368

Neo: -

Age: -

 0.958 0.958 - - - - - Mlig455_014368 {REF} {Length: 1243} {RNA1310_136830}
37. MligTC455_15661 322 6.72 Mlig455_000589

Neo: -

Age: Down-Up-Down

Region-enriched R2: 3.500/0.00231

 NR2E1 0.958 - 0.958 - - - - Mlig455_000589 {REF} {Length: 2434} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=97.6]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=73.9]} {Human: ENSG00000112333, NR2E1, nuclear receptor subfamily 2 group E member 1, [Score=188, Expect=2e-53]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [Score=188, Expect=1e-53]} {Dmel: FBgn0003720, tll, tailless, [RH, Score=202, Expect=2e-58]} {Celegans: WBGene00003657, nhr-67, Nuclear hormone receptor family member nhr-67, [RH, Score=193, Expect=3e-55]} {Smed: dd_Smed_v6_21347_0_1, dd_Smed_v6_21347_0_1, [RH, Score=188, Expect=9e-54]} {RNA1509_39776} {RNA1310_21550, RNA1509_39776} {RNA1509_39776, RNA815_27099.1}
38. MligTC455_28752 111 2.31 Mlig455_024556, Mlig455_024588, Mlig455_062242

Neo: -

Age: -

Region-enriched R8: 3.725/0.03239

 0.958 0.958 - - - - -

Mlig455_024556 {REF} {Length: 953} {RNA1509_27801} {RNA1310_32897} {RNA815_15953.1}

Mlig455_024588 {REF} {Length: 365} {RNA1310_65985} {RNA815_44318}

Mlig455_062242 {REF} {Length: 2999} {Pfam: Salt tolerance down-regulator [PF13945.8, score=20.0]} {RNA1509_54152} {RNA1310_6101.1} {RNA815_15953.1}
39. MligTC455_33741 37 0.78 Mlig455_044429, Mlig455_044463, Mlig455_046755

Neo: -

Age: -

 CLK2, CLK3 0.958 - - 0.958 - - -

Mlig455_044429 {REF} {Length: 2988} {Pfam: Protein kinase domain [PF00069.27, score=166.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.7]} {Human: ENSG00000176444, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000261893, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=444, Expect=1e-148]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=460, Expect=4e-157]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=442, Expect=3e-148]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=480, Expect=2e-151]} {Celegans: WBGene00006517, madd-3, [Score=416, Expect=1e-141]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [Score=496, Expect=2e-168]} {RNA1509_52185} {RNA1310_8105} {RNA815_38317}

Mlig455_044463 {REF} {Length: 3058} {Pfam: Protein kinase domain [PF00069.27, score=166.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.6]} {Human: ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=437, Expect=6e-146]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=456, Expect=2e-155]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=436, Expect=1e-145]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=465, Expect=6e-158]} {Celegans: WBGene00006517, madd-3, [Score=414, Expect=9e-141]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [Score=488, Expect=7e-165]} {RNA1509_52185} {RNA1310_8105, RNA1509_52185} {RNA1509_52185, RNA815_38317}

Mlig455_046755 {REF} {Length: 2356} {Pfam: Protein kinase domain [PF00069.27, score=166.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.7]} {Human: ENSG00000176444, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000261893, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=444, Expect=1e-148]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=460, Expect=4e-157]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=442, Expect=3e-148]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=480, Expect=2e-151]} {Celegans: WBGene00006517, madd-3, [Score=416, Expect=1e-141]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [Score=496, Expect=2e-168]} {RNA1509_52185} {RNA1310_8105} {RNA815_38317}
40. MligTC455_53117 86 1.79 Mlig455_029454

Neo: -

Age: logFC(26M/2M)=-0.687

 CHRNA4 0.958 - - - - 0.958 - Mlig455_029454 {REF} {Length: 3116} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=160.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=110.1]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.7]} {Human: ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=210, Expect=3e-59]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=210, Expect=5e-60]} {Mouse: ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=211, Expect=1e-59]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=209, Expect=5e-60]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=207, Expect=5e-60]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=204, Expect=5e-58]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=204, Expect=2e-56]} {Celegans: WBGene00043066, acr-25, AcetylCholine Receptor, [Score=202, Expect=1e-57]} {Smed: dd_Smed_v6_9503_0_1, dd_Smed_v6_9503_0_1, [RH, Score=451, Expect=1e-152]} {RNA1509_18288} {RNA1310_21192} {RNA815_24334}
41. MligTC455_12451 63 1.31 Mlig455_008444

Neo: -

Age: -

Region-enriched R8: 4.645/0.00722
Region-enriched R7: 3.937/0.01020

 0.957 0.957 - - - - - Mlig455_008444 {REF} {Length: 791}
42. MligTC455_19893 77 1.59 Mlig455_033319

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_033319 {REF} {Length: 534} {NoTransDecoderORF} {RNA1509_46670} {RNA1310_84118} {RNA815_60581}
43. MligTC455_24861 117 2.44 Mlig455_019572

Neo: -

Age: -

Region-enriched R8: 4.245/0.00630

 FREM1 0.956 0.956 - - - - - Mlig455_019572 {REF} {Length: 8695} {Pfam: Cadherin-like [PF16184.7, score=328.8]; Frem protein N-terminal domain [PF19309.1, score=92.3]; Lectin C-type domain [PF00059.23, score=31.6]} {Human: ENSG00000164946, FREM1, FRAS1 related extracellular matrix 1, [RH, Score=370, Expect=2e-102]} {Mouse: ENSMUSG00000059049, Frem1, Fras1 related extracellular matrix protein 1, [RH, Score=381, Expect=3e-106]} {Smed: dd_Smed_v6_5187_0_1, dd_Smed_v6_5187_0_1, [RH, Score=508, Expect=4e-147]} {RNA1509_8234} {RNA1310_595.1} {RNA815_322}
44. MligTC455_41806 792 16.49 Mlig455_049483

Neo: -

Age: logFC(26M/2M)=-0.238

Region-enriched R8: 2.716/0.00000
Region-enriched R7: 2.132/0.00000

 PKD2 0.956 0.956 - - - - - Mlig455_049483 {REF} {Length: 3737} {Pfam: Polycystin cation channel [PF08016.14, score=493.1]; Ion transport protein [PF00520.33, score=89.6]; EF hand [PF00036.34, score=22.8]; Ferredoxin I 4Fe-4S cluster domain [PF18109.3, score=20.9]} {Human: ENSG00000118762, PKD2, polycystin 2, transient receptor potential cation channel, [Score=712, Expect=0.0]; ENSG00000107593, PKD2L1, polycystin 2 like 1, transient receptor potential cation channel, [Score=694, Expect=0.0]} {Mouse: ENSMUSG00000034462, Pkd2, polycystic kidney disease 2, [Score=709, Expect=0.0]; ENSMUSG00000037578, Pkd2l1, polycystic kidney disease 2-like 1, [Score=692, Expect=0.0]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=306, Expect=2e-90]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [RH, Score=389, Expect=7e-124]} {Smed: dd_Smed_v6_17348_0_3, dd_Smed_v6_17348_0_3, [RH, Score=747, Expect=0.0]} {RNA1509_31010, RNA1509_33992} {RNA1310_4653.1, RNA1509_33992} {RNA1509_33992, RNA815_4316}
45. MligTC455_20200 47 0.97 Mlig455_021962

Neo: -

Age: -

 KCNMA1 0.955 - - - - 0.955 - Mlig455_021962 {REF} {Length: 3749} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=76.1]; Ion channel [PF07885.18, score=61.3]; Ion transport protein [PF00520.33, score=34.6]; Ligand-gated ion channel [PF00060.28, score=23.9]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=634, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=628, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=449, Expect=8e-139]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=444, Expect=2e-137]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=610, Expect=0.0]} {RNA1310_43306.1} {RNA815_38585}
46. MligTC455_16918 1218 25.38 Mlig455_039085, Mlig455_042780

Neo: -

Age: Up-Down-Down

Region-enriched R8: 5.308/0.00000
Region-enriched R7: 3.471/0.00026

 MECOM 0.954 0.954 - - - - -

Mlig455_039085 {REF} {Length: 4916} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=99.3]; C2H2-type zinc finger [PF13894.8, score=76.6]; Zinc-finger double domain [PF13465.8, score=72.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=41.2]; C2H2-type zinc finger [PF13912.8, score=35.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=25.5]; Zinc-finger of C2H2 type [PF12874.9, score=20.9]; C2H2-type zinc-finger domain [PF13909.8, score=18.4]} {Human: ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [RH, Score=147, Expect=6e-35]; ENSG00000142611, PRDM16, PR/SET domain 16, [RH, Score=145, Expect=3e-34]} {Mouse: ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [RH, Score=146, Expect=2e-35]; ENSMUSG00000039410, Prdm16, PR domain containing 16, [RH, Score=146, Expect=9e-35]} {Dmel: FBgn0045852, ham, hamlet, [RH, Score=149, Expect=1e-36]} {Celegans: WBGene00015646, mlt-10, [Score=172, Expect=3e-44]} {Smed: dd_Smed_v6_22685_0_1, dd_Smed_v6_22685_0_1, [RH, Score=145, Expect=5e-38]} {RNA1509_21422} {RNA1310_3577} {RNA815_16096}

Mlig455_042780 {REF} {Length: 3778} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=70.4]; Zinc-finger double domain [PF13465.8, score=59.4]; C2H2-type zinc finger [PF13894.8, score=36.4]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=29.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=29.0]; C2H2-type zinc finger [PF13912.8, score=28.6]; Zinc-finger of C2H2 type [PF12874.9, score=24.8]; C2H2-type zinc-finger domain [PF13909.8, score=21.2]; GAGA factor [PF09237.13, score=19.5]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=18.9]} {Human: ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [RH, Score=141, Expect=6e-35]; ENSG00000142611, PRDM16, PR/SET domain 16, [RH, Score=139, Expect=3e-34]} {Mouse: ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [RH, Score=141, Expect=3e-35]; ENSMUSG00000039410, Prdm16, PR domain containing 16, [RH, Score=140, Expect=1e-34]} {Dmel: FBgn0032707, CG10348, [RH, Score=144, Expect=8e-37]} {Celegans: WBGene00001207, egl-43, Egl-43, [RH, Score=98.2, Expect=2e-22]} {Smed: dd_Smed_v6_22685_0_1, dd_Smed_v6_22685_0_1, [RH, Score=144, Expect=9e-39]} {RNA1509_21422} {RNA1310_3577} {RNA815_16096}
47. MligTC455_25152 168 3.51 Mlig455_040072

Neo: -

Age: -

Region-enriched R8: 4.101/0.00210

 0.954 0.954 - - - - - Mlig455_040072 {REF} {Length: 2067} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=43.4]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=22.9]} {Smed: dd_Smed_v6_32358_0_1, dd_Smed_v6_32358_0_1, [Score=57.8, Expect=1e-09]} {RNA1509_20770} {RNA1310_38403} {RNA815_6249}
48. MligTC455_26669 226 4.71 Mlig455_010568, Mlig455_038100, Mlig455_062239

Neo: -

Age: -

 0.954 0.954 - - - - -

Mlig455_010568 {REF} {Length: 2800} {RNA1509_6226} {RNA1310_15973} {RNA815_15474}

Mlig455_038100 {REF} {Length: 2835} {NoTransDecoderORF} {RNA1509_6226} {RNA1310_15973} {RNA815_15474}

Mlig455_062239 {REF} {Length: 2760} {NoTransDecoderORF} {RNA1509_6226} {RNA1310_15973} {RNA815_15474}
49. MligTC455_04474 114 2.37 Mlig455_039605

Neo: -

Age: logFC(26M/2M)=-0.389

Region-enriched R8: 5.608/0.00012
Region-enriched R7: 3.934/0.02769

 HMCN1 0.953 0.953 - - - - - Mlig455_039605 {REF} {Length: 4319} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=405.5]; Spondin-like TSP1 domain [PF19028.2, score=340.3]; Thrombospondin type 1 domain [PF19030.2, score=125.1]; Scavenger receptor cysteine-rich domain [PF00530.20, score=57.7]; CCN3 Nov like TSP1 domain [PF19035.2, score=48.4]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=292, Expect=4e-80]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=288, Expect=7e-79]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=156, Expect=3e-38]} {Celegans: WBGene00016468, C36B7.5, [RH, Score=199, Expect=7e-52]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=264, Expect=9e-72]} {RNA1509_12135} {RNA1310_3277, RNA1509_12135} {RNA1509_12135, RNA815_5276}
50. MligTC455_37906 229 4.78 Mlig455_045298

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_045298 {REF} {Length: 1901} {RNA1509_26169} {RNA1310_10447.2} {RNA815_9969}
51. MligTC455_38303 142 2.96 Mlig455_021803

Neo: -

Age: Up-Down-Down

 PCLO 0.953 0.953 - - - - - Mlig455_021803 {REF} {Length: 6090} {Pfam: C2 domain [PF00168.32, score=66.7]; FYVE-type zinc finger [PF02318.18, score=55.2]; Piccolo Zn-finger [PF05715.15, score=27.5]} {Human: ENSG00000186472, PCLO, piccolo presynaptic cytomatrix protein, [RH, Score=122, Expect=6e-27]} {Mouse: ENSMUSG00000061601, Pclo, piccolo (presynaptic cytomatrix protein), [RH, Score=119, Expect=2e-26]} {Dmel: FBgn0053547, Rim, Rab3 interacting molecule, [Score=83.2, Expect=1e-15]} {Celegans: WBGene00004033, pkc-2, Protein kinase C-like 2, [Score=79.0, Expect=1e-14]} {Smed: dd_Smed_v6_9615_0_1, dd_Smed_v6_9615_0_1, [RH, Score=185, Expect=4e-47]} {RNA1509_42665} {RNA1310_6999} {RNA815_17846}
52. MligTC455_24661 112 2.33 Mlig455_019924

Neo: -

Age: Down-Up-Down

Region-enriched R8: 5.668/0.00712

 URGCP 0.952 0.952 - - - - - Mlig455_019924 {REF} {Length: 10713} {TRANSSPLICED} {Pfam: Dynamin family [PF00350.25, score=30.5]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=23.0]; 50S ribosome-binding GTPase [PF01926.25, score=21.4]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=171, Expect=3e-42]} {Mouse: ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=397, Expect=5e-111]; ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=397, Expect=5e-111]} {RNA1509_14577, RNA1509_25042, RNA1509_25783, RNA1509_41509, RNA1509_46967, RNA1509_6932} {RNA1310_285, RNA1509_14577, RNA1509_25042, RNA1509_25783, RNA1509_41509, RNA1509_46967, RNA1509_6932} {RNA1509_14577, RNA1509_25042, RNA1509_25783, RNA1509_41509, RNA1509_46967, RNA1509_6932, RNA815_97.1}
53. MligTC455_30420 109 2.28 Mlig455_054202, Mlig455_060746

Neo: -

Age: -

 TMEM26 0.952 0.952 - - - - -

Mlig455_054202 {REF} {Length: 2118} {Pfam: Transmembrane protein 26 [PF09772.11, score=227.2]} {Human: ENSG00000196932, TMEM26, transmembrane protein 26, [Score=126, Expect=7e-33]} {Mouse: ENSMUSG00000060044, Tmem26, transmembrane protein 26, [RH, Score=134, Expect=7e-36]} {Dmel: FBgn0039429, CG14238, [Score=172, Expect=5e-49]} {Celegans: WBGene00022469, Y119C1B.3, [Score=139, Expect=2e-37]} {Smed: dd_Smed_v6_30929_0_1, dd_Smed_v6_30929_0_1, [Score=144, Expect=1e-39]} {RNA1310_35836} {RNA815_14435}

Mlig455_060746 {REF} {Length: 3939} {Pfam: Transmembrane protein 26 [PF09772.11, score=226.7]} {Human: ENSG00000196932, TMEM26, transmembrane protein 26, [Score=127, Expect=5e-33]} {Mouse: ENSMUSG00000060044, Tmem26, transmembrane protein 26, [RH, Score=136, Expect=1e-36]} {Dmel: FBgn0039429, CG14238, [Score=171, Expect=8e-49]} {Celegans: WBGene00022469, Y119C1B.3, [Score=139, Expect=2e-37]} {Smed: dd_Smed_v6_30929_0_1, dd_Smed_v6_30929_0_1, [Score=144, Expect=1e-39]} {RNA1310_35836} {RNA815_14435}
54. MligTC455_36259 270 5.63 Mlig455_012889

Neo: -

Age: -

Region-enriched R8: 5.567/0.00000
Region-enriched R7: 5.476/0.00000

Regeneration-depleted R6: -6.631
Regeneration-depleted BL: -5.056

 WNT7B 0.952 0.952 - - - - - Mlig455_012889 {REF} {Length: 1741} {Pfam: wnt family [PF00110.21, score=249.8]} {Human: ENSG00000188064, WNT7B, Wnt family member 7B, [Score=153, Expect=3e-42]; ENSG00000105989, WNT2, Wnt family member 2, [Score=149, Expect=2e-40]; ENSG00000002745, WNT16, Wnt family member 16, [Score=147, Expect=1e-39]; ENSG00000154764, WNT7A, Wnt family member 7A, [Score=147, Expect=9e-40]} {Mouse: ENSMUSG00000029671, Wnt16, wingless-type MMTV integration site family, member 16, [Score=155, Expect=5e-43]; ENSMUSG00000022382, Wnt7b, wingless-type MMTV integration site family, member 7B, [Score=152, Expect=4e-42]; ENSMUSG00000022996, Wnt10b, wingless-type MMTV integration site family, member 10B, [Score=150, Expect=7e-41]} {Dmel: FBgn0284084, wg, wingless, [Score=133, Expect=4e-34]} {Celegans: WBGene00001188, egl-20, Wnt homolog, [Score=130, Expect=6e-34]} {Smed: dd_Smed_v6_28398_0_1, dd_Smed_v6_28398_0_1, [Score=214, Expect=3e-65]} {RNA1509_58183} {RNA1310_17932, RNA1509_58183} {RNA1509_58183, RNA815_30269}
55. MligTC455_37711 41 0.86 Mlig455_009915

Neo: -

Age: -

 0.952 0.952 - - - - - Mlig455_009915 {REF} {Length: 1326} {RNA1509_26004} {RNA1310_89855.1} {RNA815_1664.2}
56. MligTC455_53279 2935 61.14 Mlig455_017965

Neo: -

Age: Down-Up-Down

Region-specific R8: 3.606
Region-specific R7: 3.119

Region-enriched R8: 3.165/0.00000
Region-enriched R7: 2.525/0.00000

Regeneration-downregulated BL: -2.902

Regeneration-depleted BL: -2.902

 0.952 0.952 - - - - - Mlig455_017965 {REF} {Length: 1023} {RNA1509_20769, RNA1509_34269} {RNA1310_44808, RNA1509_20769, RNA1509_34269} {RNA1509_20769, RNA1509_34269, RNA815_8213}
57. MligTC455_05969 143 2.98 Mlig455_008036, Mlig455_008076

Neo: -

Age: Up-Down-Up

 CHRM3 0.951 - - - - 0.951 -

Mlig455_008036 {REF} {Length: 4356} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=235.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=49.3]; Olfactory receptor [PF13853.8, score=29.1]} {Human: ENSG00000133019, CHRM3, cholinergic receptor muscarinic 3, [Score=252, Expect=3e-75]} {Mouse: ENSMUSG00000046159, Chrm3, cholinergic receptor, muscarinic 3, cardiac, [Score=248, Expect=3e-74]} {Dmel: FBgn0000037, mAChR-A, muscarinic Acetylcholine Receptor, A-type, [RH, Score=216, Expect=9e-61]} {Celegans: WBGene00001519, gar-3, Muscarinic acetylcholine receptor gar-3, [RH, Score=246, Expect=2e-73]} {Smed: dd_Smed_v6_20043_0_1, dd_Smed_v6_20043_0_1, [RH, Score=243, Expect=3e-73]} {RNA1509_25623} {RNA1310_4787.1} {RNA815_38888}

Mlig455_008076 {REF} {Length: 6010} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=260.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=48.6]; Olfactory receptor [PF13853.8, score=28.2]} {Human: ENSG00000133019, CHRM3, cholinergic receptor muscarinic 3, [RH, Score=306, Expect=1e-95]} {Mouse: ENSMUSG00000046159, Chrm3, cholinergic receptor, muscarinic 3, cardiac, [RH, Score=302, Expect=3e-94]} {Dmel: FBgn0000037, mAChR-A, muscarinic Acetylcholine Receptor, A-type, [RH, Score=215, Expect=4e-60]} {Celegans: WBGene00001519, gar-3, Muscarinic acetylcholine receptor gar-3, [RH, Score=307, Expect=2e-96]} {Smed: dd_Smed_v6_20043_0_1, dd_Smed_v6_20043_0_1, [RH, Score=303, Expect=1e-95]} {RNA1509_25623} {RNA1310_4787.1, RNA1509_25623} {RNA1509_25623, RNA815_17017}
58. MligTC455_20097 1223 25.49 Mlig455_023539, Mlig455_023644

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.339

Region-enriched R8: 3.355/0.00001
Region-enriched R7: 2.047/0.03129

Regeneration-upregulated BL: 2.571

Regeneration-enriched BL: 2.571

 0.951 0.951 - - - - -

Mlig455_023539 {REF} {Length: 2548} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=20.7]} {RNA1509_20731} {RNA1310_7206} {RNA815_15099}

Mlig455_023644 {REF} {Length: 2780} {Pfam: C2H2-type zinc finger [PF13894.8, score=20.7]} {RNA1509_20731} {RNA1310_7206, RNA1509_20731} {RNA1509_20731, RNA815_15099}
59. MligTC455_29464 25 0.53 Mlig455_021892

Neo: -

Age: -

 SDCCAG8 0.95 - - 0.950 - - - Mlig455_021892 {REF} {Length: 3036} {Pfam: Centrosomal colon cancer autoantigen protein family [PF15964.7, score=164.7]} {Human: ENSG00000276111, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]; ENSG00000054282, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]} {Mouse: ENSMUSG00000026504, Sdccag8, serologically defined colon cancer antigen 8, [RH, Score=109, Expect=4e-24]} {Dmel: FBgn0266566, CG45105, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_9295_0_2, dd_Smed_v6_9295_0_2, [RH, Score=87.8, Expect=7e-18]} {RNA1509_42574} {RNA1310_5942.1} {RNA815_9353.1}
60. MligTC455_36374 58 1.2 Mlig455_016115

Neo: -

Age: -

 0.95 0.950 - - - - - Mlig455_016115 {REF} {Length: 4900} {RNA1509_18263} {RNA1310_1232} {RNA815_347}
61. MligTC455_38827 168 3.49 Mlig455_065185

Neo: -

Age: -

Region-enriched R8: 3.346/0.01415

 RDX 0.95 0.950 - - - - - Mlig455_065185 {REF} {Length: 3409} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=106.5]; FERM C-terminal PH-like domain [PF09380.12, score=87.8]; FERM central domain [PF00373.20, score=83.0]; FERM N-terminal domain [PF09379.12, score=66.5]} {Human: ENSG00000137710, RDX, radixin, [RH, Score=589, Expect=0.0]; ENSG00000092820, EZR, ezrin, [RH, Score=577, Expect=0.0]; ENSG00000147065, MSN, moesin, [RH, Score=561, Expect=0.0]} {Mouse: ENSMUSG00000032050, Rdx, radixin, [RH, Score=586, Expect=0.0]; ENSMUSG00000031207, Msn, moesin, [RH, Score=557, Expect=0.0]} {Dmel: FBgn0011661, Moe, Moesin, [RH, Score=514, Expect=5e-174]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=545, Expect=0.0]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [Score=504, Expect=7e-172]} {RNA1509_50666} {RNA1310_19690} {RNA815_6880}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA