Data search


search
Exact
Search

Results for MligTC455_37402

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37402 17 0.36 Mlig455_059423

Neo: -

Age: Up-Down-Down

Mlig455_059423 {REF} {Length: 3957} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=149.6]; WSC domain [PF01822.21, score=25.8]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=63.2, Expect=9e-10]} {Smed: dd_Smed_v6_21491_0_1, dd_Smed_v6_21491_0_1, [Score=61.6, Expect=1e-09]} {RNA1509_46373} {RNA1310_11892} {RNA815_9334}

Cumulative graph for MligTC455_37402

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.727 0.765 1.00000 1.00000
RegionR2 4.674 0.765 0.05102 0.26981
RegionR3 0.18 0.765 0.55183 1.00000
RegionR4 -1.609 0.765 1.00000 1.00000
RegionR5 -2.886 0.765 1.00000 1.00000
RegionR6 -1.539 0.765 1.00000 1.00000
RegionR7 -0.056 0.765 1.00000 1.00000
RegionR8 4.962 0.765 0.02101 0.28261

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.414 0.765 0.99967 1.00000
RegenerationR2 0.297 0.765 0.24507 0.69275
RegenerationR3 3.59 0.765 0.07784 0.46109
RegenerationR4 1.404 0.765 0.22814 0.67713
RegenerationR5 3.252 0.765 0.06407 0.39979
RegenerationR6 1.747 0.765 1.00000 1.00000
RegenerationBL -0.892 0.765 0.99977 1.00000
RegenerationTP 1.738 0.765 0.25251 0.70034


Genes with expression patterns similar to MligTC455_37402

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37402 17 0.36 Mlig455_059423

Neo: -

Age: Up-Down-Down

2 1.000 - - - 1.000 - Mlig455_059423 {REF} {Length: 3957} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=149.6]; WSC domain [PF01822.21, score=25.8]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=63.2, Expect=9e-10]} {Smed: dd_Smed_v6_21491_0_1, dd_Smed_v6_21491_0_1, [Score=61.6, Expect=1e-09]} {RNA1509_46373} {RNA1310_11892} {RNA815_9334}
2. MligTC455_18706 65 1.36 Mlig455_049127

Neo: -

Age: Down-Up-Down

0.957 0.957 - - - - - Mlig455_049127 {REF} {Length: 3316} {RNA1509_38020} {RNA1310_26284.1, RNA1509_38020} {RNA1509_38020, RNA815_13453}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA