Data search


search
Exact
Search

Results for MligTC455_37442

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37442 2187 45.57 Mlig455_021371, Mlig455_021599

Neo: -

Age: Up-Down-Up

PARP4

Mlig455_021371 {REF} {Length: 7689} {TRANSSPLICED} {Pfam: Vault protein inter-alpha-trypsin domain [PF08487.12, score=126.0]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=86.6]; Ubiquitin family [PF00240.25, score=61.5]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=44.5]; Hsp70 protein [PF00012.22, score=44.0]; von Willebrand factor type A domain [PF13768.8, score=40.6]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=34.6]; von Willebrand factor type A domain [PF00092.30, score=26.7]} {Human: ENSG00000102699, PARP4, poly(ADP-ribose) polymerase family member 4, [RH, Score=540, Expect=3e-159]} {Mouse: ENSMUSG00000054509, Parp4, poly (ADP-ribose) polymerase family, member 4, [RH, Score=550, Expect=3e-161]} {Dmel: FBgn0001216, Hsc70-1, Heat shock protein cognate 1, [Score=72.4, Expect=3e-12]} {Celegans: WBGene00002008, hsp-4, Heat shock 70 kDa protein D, [Score=73.6, Expect=1e-12]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=135, Expect=6e-32]} {RNA1509_3443} {RNA1310_270.1} {RNA815_762}

Mlig455_021599 {REF} {Length: 7450} {TRANSSPLICED} {Pfam: Vault protein inter-alpha-trypsin domain [PF08487.12, score=126.2]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=87.6]; Ubiquitin family [PF00240.25, score=60.1]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=44.5]; Hsp70 protein [PF00012.22, score=44.0]; von Willebrand factor type A domain [PF13768.8, score=43.9]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=35.0]; von Willebrand factor type A domain [PF13519.8, score=28.0]} {Human: ENSG00000102699, PARP4, poly(ADP-ribose) polymerase family member 4, [RH, Score=541, Expect=8e-160]} {Mouse: ENSMUSG00000054509, Parp4, poly (ADP-ribose) polymerase family, member 4, [RH, Score=549, Expect=2e-161]} {Dmel: FBgn0001216, Hsc70-1, Heat shock protein cognate 1, [Score=72.4, Expect=3e-12]} {Celegans: WBGene00002008, hsp-4, Heat shock 70 kDa protein D, [Score=72.0, Expect=8e-13]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=136, Expect=3e-32]} {RNA1509_3443} {RNA1310_270.1, RNA1509_3443} {RNA1509_3443, RNA815_6728}

Cumulative graph for MligTC455_37442

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.332 5.689 0.62083 1.00000
RegionR2 0.452 5.689 0.17063 0.51657
RegionR3 0.132 5.689 0.62205 1.00000
RegionR4 -0.672 5.689 0.02913 0.13311
RegionR5 -0.088 5.689 0.72323 1.00000
RegionR6 0.276 5.689 0.30102 0.89183
RegionR7 -0.385 5.689 0.28219 0.91547
RegionR8 0.616 5.689 0.11171 0.61987

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -8.374 5.689 0.00746 0.40181
RegenerationR2 0.707 5.689 0.01256 0.18258
RegenerationR3 0.582 5.689 0.06481 0.42907
RegenerationR4 0.69 5.689 0.03100 0.28436
RegenerationR5 0.643 5.689 0.03094 0.29342
RegenerationR6 0.425 5.689 0.17210 0.50383
RegenerationBL 1.036 5.689 0.00127 0.02667
RegenerationTP 0.338 5.689 0.35980 0.79980


Genes with expression patterns similar to MligTC455_37442

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37442 2187 45.57 Mlig455_021371, Mlig455_021599

Neo: -

Age: Up-Down-Up

PARP4 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_021371 {REF} {Length: 7689} {TRANSSPLICED} {Pfam: Vault protein inter-alpha-trypsin domain [PF08487.12, score=126.0]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=86.6]; Ubiquitin family [PF00240.25, score=61.5]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=44.5]; Hsp70 protein [PF00012.22, score=44.0]; von Willebrand factor type A domain [PF13768.8, score=40.6]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=34.6]; von Willebrand factor type A domain [PF00092.30, score=26.7]} {Human: ENSG00000102699, PARP4, poly(ADP-ribose) polymerase family member 4, [RH, Score=540, Expect=3e-159]} {Mouse: ENSMUSG00000054509, Parp4, poly (ADP-ribose) polymerase family, member 4, [RH, Score=550, Expect=3e-161]} {Dmel: FBgn0001216, Hsc70-1, Heat shock protein cognate 1, [Score=72.4, Expect=3e-12]} {Celegans: WBGene00002008, hsp-4, Heat shock 70 kDa protein D, [Score=73.6, Expect=1e-12]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=135, Expect=6e-32]} {RNA1509_3443} {RNA1310_270.1} {RNA815_762}

Mlig455_021599 {REF} {Length: 7450} {TRANSSPLICED} {Pfam: Vault protein inter-alpha-trypsin domain [PF08487.12, score=126.2]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=87.6]; Ubiquitin family [PF00240.25, score=60.1]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=44.5]; Hsp70 protein [PF00012.22, score=44.0]; von Willebrand factor type A domain [PF13768.8, score=43.9]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=35.0]; von Willebrand factor type A domain [PF13519.8, score=28.0]} {Human: ENSG00000102699, PARP4, poly(ADP-ribose) polymerase family member 4, [RH, Score=541, Expect=8e-160]} {Mouse: ENSMUSG00000054509, Parp4, poly (ADP-ribose) polymerase family, member 4, [RH, Score=549, Expect=2e-161]} {Dmel: FBgn0001216, Hsc70-1, Heat shock protein cognate 1, [Score=72.4, Expect=3e-12]} {Celegans: WBGene00002008, hsp-4, Heat shock 70 kDa protein D, [Score=72.0, Expect=8e-13]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=136, Expect=3e-32]} {RNA1509_3443} {RNA1310_270.1, RNA1509_3443} {RNA1509_3443, RNA815_6728}
2. MligTC455_23863 1517 31.61 Mlig455_032807

Neo: -

Age: -

OSTF1 0.953 - - - - - 0.953 Mlig455_032807 {REF} {Length: 2506} {Pfam: Ankyrin repeats (many copies) [PF13857.8, score=80.1]; Ankyrin repeats (many copies) [PF13637.8, score=74.6]; Ankyrin repeats (3 copies) [PF12796.9, score=65.8]; Ankyrin repeat [PF00023.32, score=58.7]; Variant SH3 domain [PF14604.8, score=51.4]; SH3 domain [PF00018.30, score=50.9]; Ankyrin repeat [PF13606.8, score=45.7]; Variant SH3 domain [PF07653.19, score=38.3]} {Human: ENSG00000134996, OSTF1, osteoclast stimulating factor 1, [RH, Score=165, Expect=7e-51]} {Mouse: ENSMUSG00000024725, Ostf1, osteoclast stimulating factor 1, [RH, Score=169, Expect=1e-52]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=74.3, Expect=5e-15]} {Celegans: WBGene00013724, Y106G6H.14, [RH, Score=152, Expect=4e-46]} {Smed: dd_Smed_v6_2235_0_1, dd_Smed_v6_2235_0_1, [RH, Score=199, Expect=2e-64]} {RNA1509_13761, RNA1509_18126, RNA1509_23290, RNA1509_42062, RNA1509_43986, RNA1509_52085} {RNA1310_32571, RNA1509_13761, RNA1509_18126, RNA1509_23290, RNA1509_42062, RNA1509_43986, RNA1509_52085} {RNA1509_13761, RNA1509_18126, RNA1509_23290, RNA1509_42062, RNA1509_43986, RNA1509_52085, RNA815_14660}
3. MligTC455_46772 69 1.45 Mlig455_001764

Neo: -

Age: -

GVQW3 0.952 - - - 0.952 - - Mlig455_001764 {REF} {Length: 3678} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=70.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=38.6]; HTH domain in Mos1 transposase [PF17906.3, score=32.2]; Homeodomain-like domain [PF13565.8, score=24.2]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [RH, Score=142, Expect=5e-38]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=94.0, Expect=4e-20]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=107, Expect=1e-24]} {Celegans: WBGene00003623, nhr-25, Nuclear hormone receptor family member nhr-25, [Score=77.8, Expect=7e-15]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=103, Expect=5e-23]} {RNA1509_37146} {RNA1310_13491.1} {RNA815_9073}
4. MligTC455_44222 4434 92.38 Mlig455_015435

Neo: -

Age: -

PRDX5 0.95 - - - - 0.950 - Mlig455_015435 {REF} {Length: 1050} {TRANSSPLICED} {Pfam: Redoxin [PF08534.12, score=119.3]; AhpC/TSA family [PF00578.23, score=44.4]} {Human: ENSG00000126432, PRDX5, peroxiredoxin 5, [RH, Score=169, Expect=6e-53]} {Mouse: ENSMUSG00000024953, Prdx5, peroxiredoxin 5, [RH, Score=162, Expect=2e-50]} {Dmel: FBgn0038570, Prx5, Peroxiredoxin 5, [RH, Score=165, Expect=7e-52]} {Smed: dd_Smed_v6_1290_0_1, dd_Smed_v6_1290_0_1, [RH, Score=177, Expect=4e-57]} {RNA1509_10566, RNA1509_32027, RNA1509_7087} {RNA1310_33443, RNA1509_10566, RNA1509_32027, RNA1509_7087} {RNA1509_10566, RNA1509_32027, RNA1509_7087, RNA815_14438.2}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA