TomoSeq data search

Data search

Results for MligTC455_46772

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46772

69

1.45

Mlig455_001764

Neo: -

Age: -

GVQW3

Mlig455_001764 {REF} {Length: 3678} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=70.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=38.6]; HTH domain in Mos1 transposase [PF17906.3, score=32.2]; Homeodomain-like domain [PF13565.8, score=24.2]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [RH, Score=142, Expect=5e-38]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=94.0, Expect=4e-20]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=107, Expect=1e-24]} {Celegans: WBGene00003623, nhr-25, Nuclear hormone receptor family member nhr-25, [Score=77.8, Expect=7e-15]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=103, Expect=5e-23]} {RNA1509_37146} {RNA1310_13491.1} {RNA815_9073}

Cumulative graph for MligTC455_46772

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.261	1.595	1.00000	1.00000
RegionR2	1.135	1.595	0.37775	0.77222
RegionR3	1.52	1.595	0.23421	0.77601
RegionR4	2.209	1.595	0.14094	0.38382
RegionR5	2.612	1.595	0.02269	0.10607
RegionR6	0.408	1.595	0.60610	1.00000
RegionR7	-2.858	1.595	0.99963	1.00000
RegionR8	-2.766	1.595	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	4.58	1.595	0.42444	1.00000
RegenerationR2	1.042	1.595	0.21240	0.65955
RegenerationR3	0.021	1.595	0.99073	1.00000
RegenerationR4	0.844	1.595	0.44918	0.84132
RegenerationR5	-1.018	1.595	0.25756	0.68938
RegenerationR6	2.107	1.595	0.07087	0.33280
RegenerationBL	4.631	1.595	0.00460	0.06204
RegenerationTP	2.19	1.595	0.41839	0.84264

Genes with expression patterns similar to MligTC455_46772

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46772	69	1.45	Mlig455_001764	Neo: - Age: -	GVQW3	4	1.000	-	1.000	1.000	1.000	-	Mlig455_001764 {REF} {Length: 3678} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=70.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=38.6]; HTH domain in Mos1 transposase [PF17906.3, score=32.2]; Homeodomain-like domain [PF13565.8, score=24.2]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [RH, Score=142, Expect=5e-38]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=94.0, Expect=4e-20]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=107, Expect=1e-24]} {Celegans: WBGene00003623, nhr-25, Nuclear hormone receptor family member nhr-25, [Score=77.8, Expect=7e-15]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=103, Expect=5e-23]} {RNA1509_37146} {RNA1310_13491.1} {RNA815_9073}
2.	MligTC455_27380	52	1.08	Mlig455_002360, Mlig455_043190	Neo: - Age: -		1.696	-	-	0.988	0.708	-	-	Mlig455_002360 {REF} {Length: 752} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696} Mlig455_043190 {REF} {Length: 3497} {TRANSSPLICED} {Pfam: Mediator complex subunit 28 [PF11594.10, score=19.2]} {RNA1509_14239} {RNA1310_5913.1} {RNA815_3696}
3.	MligTC455_26155	186	3.88	Mlig455_011976	Neo: - Age: logFC(26M/2M)=0.338	ARPP19	0.99	-	-	0.990	-	-	-	Mlig455_011976 {REF} {Length: 2689} {TRANSSPLICED} {Pfam: cAMP-regulated phosphoprotein/endosulfine conserved region [PF04667.19, score=32.4]} {Human: ENSG00000128989, ARPP19, cAMP regulated phosphoprotein 19, [Score=74.3, Expect=2e-17]} {Mouse: ENSMUSG00000007656, Arpp19, cAMP-regulated phosphoprotein 19, [Score=75.9, Expect=3e-18]; ENSMUSG00000038619, Ensa, endosulfine alpha, [Score=72.4, Expect=1e-16]} {Dmel: FBgn0061515, endos, endosulfine, [Score=63.5, Expect=2e-13]} {Smed: dd_Smed_v6_4126_0_2, dd_Smed_v6_4126_0_2, [Score=71.2, Expect=1e-16]} {RNA1509_41546} {RNA1310_25045.1} {RNA815_23953}
4.	MligTC455_38526	49	1.02	Mlig455_055981	Neo: - Age: logFC(26M/2M)=0.636 Region-enriched R5: 3.806/0.01080		0.985	-	-	0.985	-	-	-	Mlig455_055981 {REF} {Length: 2090} {RNA1509_28642} {RNA1310_45785} {RNA815_35110}
5.	MligTC455_17428	38	0.79	Mlig455_000979, Mlig455_037506	Neo: - Age: -		0.984	-	-	0.984	-	-	-	Mlig455_000979 {REF} {Length: 776} {NoTransDecoderORF} {RNA1310_141381} Mlig455_037506 {REF} {Length: 714} {NoTransDecoderORF} {RNA1310_141381}
6.	MligTC455_19526	40	0.84	Mlig455_032263	Neo: - Age: - Region-enriched R5: 4.476/0.00075		0.979	-	-	0.979	-	-	-	Mlig455_032263 {REF} {Length: 986} {RNA1509_59284} {RNA1310_56370} {RNA815_27780}
7.	MligTC455_22190	155	3.23	Mlig455_037448	Neo: - Age: Down-Up-Down		0.976	-	-	0.976	-	-	-	Mlig455_037448 {REF} {Length: 1280} {TRANSSPLICED} {RNA1509_26312} {RNA1310_42598} {RNA815_21773}
8.	MligTC455_22817	26	0.53	Mlig455_003283	Neo: - Age: Down-Up-Down		0.964	-	-	0.964	-	-	-	Mlig455_003283 {REF} {Length: 2014} {NoTransDecoderORF} {RNA1509_47481} {RNA1310_34120.2, RNA1509_47481} {RNA1509_47481, RNA815_36031}
9.	MligTC455_42422	184	3.83	Mlig455_056429	Neo: - Age: Down-Up-Up		0.963	-	-	-	0.963	-	-	Mlig455_056429 {REF} {Length: 519} {RNA1310_86827} {RNA815_60970}
10.	MligTC455_38194	392	8.16	Mlig455_048006	Neo: - Age: -	ANK3	0.962	-	-	-	0.962	-	-	Mlig455_048006 {REF} {Length: 3899} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=75.8]; Ankyrin repeats (many copies) [PF13637.8, score=60.7]; Ankyrin repeat [PF13606.8, score=44.0]; Ankyrin repeat [PF00023.32, score=43.8]; Ankyrin repeats (many copies) [PF13857.8, score=40.6]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=55.1, Expect=3e-07]; ENSG00000101752, MIB1, mindbomb E3 ubiquitin protein ligase 1, [Score=54.3, Expect=4e-07]; ENSG00000145362, ANK2, ankyrin 2, [Score=54.3, Expect=4e-07]; ENSG00000138376, BARD1, BRCA1 associated RING domain 1, [Score=53.5, Expect=6e-07]; ENSG00000239388, ASB14, ankyrin repeat and SOCS box containing 14, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=56.6, Expect=5e-08]; ENSMUSG00000116208, Asb14, ankyrin repeat and SOCS box-containing 14, [Score=54.7, Expect=2e-07]; ENSMUSG00000026196, Bard1, BRCA1 associated RING domain 1, [Score=54.7, Expect=2e-07]; ENSMUSG00000021898, Asb14, ankyrin repeat and SOCS box-containing 14, [Score=54.7, Expect=2e-07]; ENSMUSG00000024294, Mib1, mindbomb E3 ubiquitin protein ligase 1, [Score=54.3, Expect=2e-07]} {Dmel: FBgn0261881, l(2)35Be, lethal (2) 35Be, [Score=60.1, Expect=5e-10]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=48.9, Expect=7e-06]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=59.3, Expect=3e-09]} {RNA1509_9269} {RNA1310_4916} {RNA815_4776}
11.	MligTC455_14857	21	0.43	Mlig455_014926	Neo: - Age: -		0.961	-	-	0.961	-	-	-	Mlig455_014926 {REF} {Length: 368} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_57743.2} {RNA815_45547}
12.	MligTC455_18843	15	0.3	Mlig455_068761	Neo: - Age: -		0.957	-	-	0.957	-	-	-	Mlig455_068761 {REF} {Length: 734} {NoTransDecoderORF} {RNA1310_115139}
13.	MligTC455_28144	413	8.6	Mlig455_004583, Mlig455_014444, Mlig455_017702, Mlig455_031687, Mlig455_040527	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_004583 {REF} {Length: 1809} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_014444 {REF} {Length: 2800} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_017702 {REF} {Length: 1835} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_031687 {REF} {Length: 2190} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_040527 {REF} {Length: 2301} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
14.	MligTC455_20388	59	1.23	Mlig455_017695	Neo: - Age: -		0.955	-	-	-	0.955	-	-	Mlig455_017695 {REF} {Length: 5773} {NoTransDecoderORF} {RNA1509_38490} {RNA1310_25207} {RNA815_21778}
15.	MligTC455_04897	17	0.36	Mlig455_049759	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_049759 {REF} {Length: 407} {NoTransDecoderORF}
16.	MligTC455_37442	2187	45.57	Mlig455_021371, Mlig455_021599	Neo: - Age: Up-Down-Up	PARP4	0.952	-	-	-	0.952	-	-	Mlig455_021371 {REF} {Length: 7689} {TRANSSPLICED} {Pfam: Vault protein inter-alpha-trypsin domain [PF08487.12, score=126.0]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=86.6]; Ubiquitin family [PF00240.25, score=61.5]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=44.5]; Hsp70 protein [PF00012.22, score=44.0]; von Willebrand factor type A domain [PF13768.8, score=40.6]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=34.6]; von Willebrand factor type A domain [PF00092.30, score=26.7]} {Human: ENSG00000102699, PARP4, poly(ADP-ribose) polymerase family member 4, [RH, Score=540, Expect=3e-159]} {Mouse: ENSMUSG00000054509, Parp4, poly (ADP-ribose) polymerase family, member 4, [RH, Score=550, Expect=3e-161]} {Dmel: FBgn0001216, Hsc70-1, Heat shock protein cognate 1, [Score=72.4, Expect=3e-12]} {Celegans: WBGene00002008, hsp-4, Heat shock 70 kDa protein D, [Score=73.6, Expect=1e-12]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=135, Expect=6e-32]} {RNA1509_3443} {RNA1310_270.1} {RNA815_762} Mlig455_021599 {REF} {Length: 7450} {TRANSSPLICED} {Pfam: Vault protein inter-alpha-trypsin domain [PF08487.12, score=126.2]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=87.6]; Ubiquitin family [PF00240.25, score=60.1]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=44.5]; Hsp70 protein [PF00012.22, score=44.0]; von Willebrand factor type A domain [PF13768.8, score=43.9]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=35.0]; von Willebrand factor type A domain [PF13519.8, score=28.0]} {Human: ENSG00000102699, PARP4, poly(ADP-ribose) polymerase family member 4, [RH, Score=541, Expect=8e-160]} {Mouse: ENSMUSG00000054509, Parp4, poly (ADP-ribose) polymerase family, member 4, [RH, Score=549, Expect=2e-161]} {Dmel: FBgn0001216, Hsc70-1, Heat shock protein cognate 1, [Score=72.4, Expect=3e-12]} {Celegans: WBGene00002008, hsp-4, Heat shock 70 kDa protein D, [Score=72.0, Expect=8e-13]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=136, Expect=3e-32]} {RNA1509_3443} {RNA1310_270.1, RNA1509_3443} {RNA1509_3443, RNA815_6728}
17.	MligTC455_27928	517	10.77	Mlig455_001032	Neo: - Age: -	STK36	0.95	-	-	-	0.950	-	-	Mlig455_001032 {REF} {Length: 5142} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=247.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=142.7]; ABC1 atypical kinase-like domain [PF03109.18, score=23.9]; HEAT repeat [PF02985.24, score=22.1]; Kinase-like [PF14531.8, score=20.6]} {Human: ENSG00000163482, STK36, serine/threonine kinase 36, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000033276, Stk36, serine/threonine kinase 36, [RH, Score=591, Expect=0.0]} {Dmel: FBgn0001079, fu, fused, [RH, Score=290, Expect=1e-82]} {Celegans: WBGene00004789, sgk-1, Serine/threonine-protein kinase sgk-1, [Score=168, Expect=1e-44]} {Smed: dd_Smed_v6_11067_0_1, dd_Smed_v6_11067_0_1, [RH, Score=765, Expect=0.0]} {RNA1509_5397} {RNA1310_7915.1, RNA1509_5397} {RNA1509_5397, RNA815_4145}

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