TomoSeq data search

Data search

Results for MligTC455_37635

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37635

12

0.25

Mlig455_004976, Mlig455_018805, Mlig455_034454, Mlig455_037269

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.658

Mlig455_004976 {REF} {Length: 889} {NoTransDecoderORF} {RNA1509_34079} {RNA1310_61747} {RNA815_18554}

Mlig455_018805 {REF} {Length: 205} {NoTransDecoderORF} {RNA1509_38419} {RNA1310_64671} {RNA815_18160}

Mlig455_034454 {REF} {Length: 317} {NoTransDecoderORF} {RNA1509_38419} {RNA1310_44550.2} {RNA815_18554}

Mlig455_037269 {REF} {Length: 475} {RNA1509_34079} {RNA1310_44550.2} {RNA815_16948}

Cumulative graph for MligTC455_37635

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.632	0.606	0.99987	1.00000
RegionR2	0.683	0.606	0.99970	1.00000
RegionR3	-0.934	0.606	0.99973	1.00000
RegionR4	-0.269	0.606	1.00000	1.00000
RegionR5	-1.396	0.606	0.99981	1.00000
RegionR6	-0.802	0.606	0.99959	1.00000
RegionR7	0.588	0.606	0.99965	1.00000
RegionR8	0.498	0.606	0.99981	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.007	0.606	1.00000	1.00000
RegenerationR2	0.493	0.606	0.99984	1.00000
RegenerationR3	2.586	0.606	0.50549	0.85901
RegenerationR4	3.053	0.606	0.61853	0.92014
RegenerationR5	3.944	0.606	0.19611	0.62801
RegenerationR6	3.336	0.606	0.10673	0.40446
RegenerationBL	0.379	0.606	0.99990	1.00000
RegenerationTP	-0.186	0.606	0.99984	1.00000

Genes with expression patterns similar to MligTC455_37635

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37635	12	0.25	Mlig455_004976, Mlig455_018805, Mlig455_034454, Mlig455_037269	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.658		1	-	-	-	-	-	1.000	Mlig455_004976 {REF} {Length: 889} {NoTransDecoderORF} {RNA1509_34079} {RNA1310_61747} {RNA815_18554} Mlig455_018805 {REF} {Length: 205} {NoTransDecoderORF} {RNA1509_38419} {RNA1310_64671} {RNA815_18160} Mlig455_034454 {REF} {Length: 317} {NoTransDecoderORF} {RNA1509_38419} {RNA1310_44550.2} {RNA815_18554} Mlig455_037269 {REF} {Length: 475} {RNA1509_34079} {RNA1310_44550.2} {RNA815_16948}
2.	MligTC455_10308	5	0.1	Mlig455_070414	Neo: - Age: -	PIF1	0.978	-	-	-	-	-	0.978	Mlig455_070414 {REF} {Length: 1151} {Pfam: PIF1-like helicase [PF05970.16, score=327.6]; AAA domain [PF13604.8, score=61.0]; P-loop Domain of unknown function (DUF2791) [PF10923.10, score=18.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=103, Expect=2e-22]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=100, Expect=9e-22]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=98.2, Expect=4e-21]} {Celegans: WBGene00021577, Y46B2A.2, [Score=234, Expect=8e-66]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=99.8, Expect=9e-22]} {RNA1509_21993} {RNA1310_51343}
3.	MligTC455_02728	12	0.24	Mlig455_032385	Neo: - Age: -		0.972	-	-	-	-	-	0.972	Mlig455_032385 {REF} {Length: 1680} {NoTransDecoderORF}
4.	MligTC455_56445	2	0.04	Mlig455_035882	Neo: - Age: -		0.972	-	-	-	-	-	0.972	Mlig455_035882 {REF} {Length: 270} {NoTransDecoderORF} {RNA1310_87020} {RNA815_51356.1}
5.	MligTC455_09501	17	0.36	Mlig455_051721, Mlig455_051744	Neo: Int S/G2/M Age: -		0.968	-	-	-	-	-	0.968	Mlig455_051721 {REF} {Length: 2673} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=142.6]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=60.8, Expect=2e-09]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=248, Expect=1e-73]} {RNA1509_19376} {RNA1310_47426} {RNA815_43225} Mlig455_051744 {REF} {Length: 1805} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=143.0]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=62.4, Expect=9e-10]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=246, Expect=7e-73]} {RNA1310_64849} {RNA815_43225}
6.	MligTC455_11986	13	0.27	Mlig455_026059, Mlig455_037303	Neo: - Age: Down-Up-Down	SPEF1	0.966	-	-	-	-	-	0.966	Mlig455_026059 {REF} {Length: 859} {Pfam: CH-like domain in sperm protein [PF06294.13, score=108.1]; CAMSAP CH domain [PF11971.10, score=50.0]} {Human: ENSG00000101222, SPEF1, sperm flagellar 1, [Score=152, Expect=1e-44]} {Mouse: ENSMUSG00000027329, Spef1, sperm flagellar 1, [Score=156, Expect=2e-46]} {Dmel: FBgn0030722, CG12395, [RH, Score=71.2, Expect=3e-14]} {Smed: dd_Smed_v6_5648_0_1, dd_Smed_v6_5648_0_1, [Score=243, Expect=4e-81]} {RNA1509_53151} {RNA1310_9792} {RNA815_15789.1} Mlig455_037303 {REF} {Length: 931} {Pfam: CH-like domain in sperm protein [PF06294.13, score=109.0]; CAMSAP CH domain [PF11971.10, score=50.3]} {Human: ENSG00000101222, SPEF1, sperm flagellar 1, [Score=120, Expect=7e-33]} {Mouse: ENSMUSG00000027329, Spef1, sperm flagellar 1, [Score=122, Expect=4e-34]; ENSMUSG00000073795, 6430531B16Rik, RIKEN cDNA 6430531B16 gene, [Score=118, Expect=2e-32]} {Dmel: FBgn0036029, CG16719, [Score=61.2, Expect=5e-11]} {Smed: dd_Smed_v6_5648_0_1, dd_Smed_v6_5648_0_1, [Score=192, Expect=1e-61]} {RNA1509_53151} {RNA1310_9792} {RNA815_15789.1}
7.	MligTC455_37273	17	0.35	Mlig455_051273	Neo: - Age: -		0.966	-	-	-	-	-	0.966	Mlig455_051273 {REF} {Length: 2458} {RNA1509_58025} {RNA1310_88805} {RNA815_52326}
8.	MligTC455_12355	27	0.56	Mlig455_024618	Neo: - Age: -	CHRNA3	0.963	-	-	-	-	-	0.963	Mlig455_024618 {REF} {Length: 2865} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=270.1]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=246.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [RH, Score=432, Expect=7e-146]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [RH, Score=432, Expect=5e-146]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [RH, Score=419, Expect=1e-140]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [RH, Score=427, Expect=6e-144]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [RH, Score=426, Expect=2e-143]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [RH, Score=418, Expect=1e-140]; ENSMUSG00000035200, Chrnb4, cholinergic receptor, nicotinic, beta polypeptide 4, [RH, Score=406, Expect=4e-136]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [RH, Score=524, Expect=0.0]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=459, Expect=4e-157]} {Smed: dd_Smed_v6_14630_0_1, dd_Smed_v6_14630_0_1, [RH, Score=521, Expect=6e-180]} {RNA1509_36802} {RNA1310_50512} {RNA815_3014.1}
9.	MligTC455_03096	8	0.17	Mlig455_065652	Neo: Int S/G2/M Age: -		0.962	-	-	-	-	-	0.962	Mlig455_065652 {REF} {Length: 1767} {NoTransDecoderORF}
10.	MligTC455_18739	120	2.5	Mlig455_005209	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_005209 {REF} {Length: 1000} {NoTransDecoderORF}
11.	MligTC455_36367	36	0.75	Mlig455_040239, Mlig455_046138, Mlig455_055232	Neo: - Age: Down-Down-Up Region-enriched R4: 4.370/0.02035		0.955	-	-	-	-	-	0.955	Mlig455_040239 {REF} {Length: 878} {NoTransDecoderORF} {RNA1509_55687} {RNA1310_13666} {RNA815_21259} Mlig455_046138 {REF} {Length: 565} {NoTransDecoderORF} {RNA1509_55687} {RNA1310_13666} {RNA815_21259} Mlig455_055232 {REF} {Length: 1175} {NoTransDecoderORF} {RNA1509_55687} {RNA1310_13666} {RNA815_21259}
12.	MligTC455_36520	30	0.63	Mlig455_018928	Neo: - Age: -		0.954	-	-	-	-	-	0.954	Mlig455_018928 {REF} {Length: 960} {RNA1509_13252, RNA1509_31672} {RNA1310_38041, RNA1509_31672} {RNA1509_31672, RNA815_26976}
13.	MligTC455_22222	22	0.46	Mlig455_003016, Mlig455_003221	Neo: - Age: - Region-enriched R4: 4.417/0.01034		0.95	-	-	-	-	-	0.950	Mlig455_003016 {REF} {Length: 1450} {RNA1509_42625} {RNA1310_49270} {RNA815_41227} Mlig455_003221 {REF} {Length: 1447} {TRANSSPLICED} {RNA1509_56376} {RNA1310_49270} {RNA815_32504}

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