M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_12355

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_12355 27 0.56 Mlig455_024618

Neo: -

Age: -

 CHRNA3 Mlig455_024618 {REF} {Length: 2865} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=270.1]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=246.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [RH, Score=432, Expect=7e-146]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [RH, Score=432, Expect=5e-146]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [RH, Score=419, Expect=1e-140]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [RH, Score=427, Expect=6e-144]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [RH, Score=426, Expect=2e-143]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [RH, Score=418, Expect=1e-140]; ENSMUSG00000035200, Chrnb4, cholinergic receptor, nicotinic, beta polypeptide 4, [RH, Score=406, Expect=4e-136]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [RH, Score=524, Expect=0.0]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=459, Expect=4e-157]} {Smed: dd_Smed_v6_14630_0_1, dd_Smed_v6_14630_0_1, [RH, Score=521, Expect=6e-180]} {RNA1509_36802} {RNA1310_50512} {RNA815_3014.1}

Cumulative graph for MligTC455_12355

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.437 1.175 0.99961 1.00000
RegionR2 4.697 1.175 0.02017 0.15411
RegionR3 3.752 1.175 0.01924 0.23124
RegionR4 0.135 1.175 0.65268 0.95469
RegionR5 1.112 1.175 0.38826 0.74405
RegionR6 2.203 1.175 0.21961 0.79923
RegionR7 -1.641 1.175 0.99987 1.00000
RegionR8 -2.821 1.175 0.99976 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.375 1.175 0.99983 1.00000
RegenerationR2 0.225 1.175 0.83711 1.00000
RegenerationR3 -0.909 1.175 0.50760 0.85976
RegenerationR4 2.382 1.175 0.04924 0.35782
RegenerationR5 2.301 1.175 0.02985 0.28981
RegenerationR6 2.006 1.175 0.11075 0.41035
RegenerationBL -0.052 1.175 0.99971 1.00000
RegenerationTP 1.24 1.175 1.00000 1.00000


Genes with expression patterns similar to MligTC455_12355

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_12355 27 0.56 Mlig455_024618

Neo: -

Age: -

 CHRNA3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_024618 {REF} {Length: 2865} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=270.1]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=246.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [RH, Score=432, Expect=7e-146]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [RH, Score=432, Expect=5e-146]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [RH, Score=419, Expect=1e-140]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [RH, Score=427, Expect=6e-144]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [RH, Score=426, Expect=2e-143]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [RH, Score=418, Expect=1e-140]; ENSMUSG00000035200, Chrnb4, cholinergic receptor, nicotinic, beta polypeptide 4, [RH, Score=406, Expect=4e-136]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [RH, Score=524, Expect=0.0]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=459, Expect=4e-157]} {Smed: dd_Smed_v6_14630_0_1, dd_Smed_v6_14630_0_1, [RH, Score=521, Expect=6e-180]} {RNA1509_36802} {RNA1310_50512} {RNA815_3014.1}
2. MligTC455_11476 26 0.54 Mlig455_035212

Neo: -

Age: -

 1.751 - - 0.988 - 0.763 - Mlig455_035212 {REF} {Length: 1374} {RNA1310_88897} {RNA815_51066}
3. MligTC455_24197 48 1 Mlig455_062645

Neo: -

Age: -

 KCNH7 1.727 - - 0.981 0.746 - - Mlig455_062645 {REF} {Length: 4615} {Pfam: Ion transport protein [PF00520.33, score=125.5]; Cyclic nucleotide-binding domain [PF00027.31, score=51.0]; Ion channel [PF07885.18, score=45.8]} {Human: ENSG00000184611, KCNH7, potassium voltage-gated channel subfamily H member 7, [RH, Score=841, Expect=0.0]; ENSG00000173826, KCNH6, potassium voltage-gated channel subfamily H member 6, [RH, Score=818, Expect=0.0]; ENSG00000055118, KCNH2, potassium voltage-gated channel subfamily H member 2, [RH, Score=805, Expect=0.0]} {Mouse: ENSMUSG00000059742, Kcnh7, potassium voltage-gated channel, subfamily H (eag-related), member 7, [RH, Score=840, Expect=0.0]; ENSMUSG00000001901, Kcnh6, potassium voltage-gated channel, subfamily H (eag-related), member 6, [RH, Score=816, Expect=0.0]; ENSMUSG00000038319, Kcnh2, potassium voltage-gated channel, subfamily H (eag-related), member 2, [RH, Score=805, Expect=0.0]} {Dmel: FBgn0003353, sei, seizure, [RH, Score=780, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [RH, Score=764, Expect=0.0]} {Smed: dd_Smed_v6_12621_0_1, dd_Smed_v6_12621_0_1, [RH, Score=841, Expect=0.0]} {RNA1509_16542} {RNA1310_43827} {RNA815_26448}
4. MligTC455_12438 17 0.35 Mlig455_009594

Neo: -

Age: -

 1.72 - - 1.000 0.720 - - Mlig455_009594 {REF} {Length: 2044} {RNA1310_39190} {RNA815_29274}
5. MligTC455_13493 28 0.58 Mlig455_020299

Neo: -

Age: -

 1 - - 1.000 - - - Mlig455_020299 {REF} {Length: 568} {RNA1310_11315} {RNA815_53929}
6. MligTC455_15134 15 0.31 Mlig455_000804

Neo: -

Age: -

 CNGA3 1 - - 1.000 - - - Mlig455_000804 {REF} {Length: 2294} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=62.8]; Ion transport protein [PF00520.33, score=39.4]} {Human: ENSG00000144191, CNGA3, cyclic nucleotide gated channel alpha 3, [Score=351, Expect=2e-113]; ENSG00000198515, CNGA1, cyclic nucleotide gated channel alpha 1, [Score=344, Expect=2e-110]; ENSG00000183862, CNGA2, cyclic nucleotide gated channel alpha 2, [Score=340, Expect=2e-109]} {Mouse: ENSMUSG00000026114, Cnga3, cyclic nucleotide gated channel alpha 3, [Score=352, Expect=9e-115]; ENSMUSG00000067220, Cnga1, cyclic nucleotide gated channel alpha 1, [Score=342, Expect=7e-110]; ENSMUSG00000005864, Cnga2, cyclic nucleotide gated channel alpha 2, [Score=338, Expect=9e-109]} {Dmel: FBgn0259145, CG42260, [Score=463, Expect=1e-153]} {Celegans: WBGene00006526, tax-4, Cyclic nucleotide-gated cation channel, [Score=281, Expect=1e-86]} {Smed: dd_Smed_v6_22398_0_1, dd_Smed_v6_22398_0_1, [Score=343, Expect=2e-111]} {RNA1310_120793} {RNA815_25814}
7. MligTC455_15160 11 0.23 Mlig455_024917

Neo: -

Age: -

 1 - - 1.000 - - - Mlig455_024917 {REF} {Length: 773} {TRANSSPLICED} {RNA1310_98042}
8. MligTC455_18788 27 0.57 Mlig455_040989, Mlig455_040991

Neo: -

Age: -

 1 - - 1.000 - - -

Mlig455_040989 {REF} {Length: 1277} {RNA1509_56938} {RNA1310_39299} {RNA815_53904}

Mlig455_040991 {REF} {Length: 1852} {RNA1509_56938} {RNA1310_34736} {RNA815_16785.1}
9. MligTC455_36252 20 0.42 Mlig455_050668

Neo: -

Age: -

 PRKAR2B 1 - - 1.000 - - - Mlig455_050668 {REF} {Length: 1234} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=45.2]} {Human: ENSG00000284096, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=93.2, Expect=9e-21]; ENSG00000005249, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=93.2, Expect=9e-21]} {Mouse: ENSMUSG00000002997, Prkar2b, protein kinase, cAMP dependent regulatory, type II beta, [Score=93.2, Expect=7e-21]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=96.3, Expect=3e-22]} {Smed: dd_Smed_v6_1362_0_1, dd_Smed_v6_1362_0_1, [Score=87.8, Expect=2e-19]}
10. MligTC455_54226 52 1.09 Mlig455_037435, Mlig455_037458

Neo: -

Age: -

 NETO2 1 - - 1.000 - - -

Mlig455_037435 {REF} {Length: 2663} {Pfam: CUB domain [PF00431.22, score=52.2]; Low-density lipoprotein receptor domain class A [PF00057.20, score=31.7]} {Human: ENSG00000171208, NETO2, neuropilin and tolloid like 2, [Score=96.3, Expect=3e-20]} {Mouse: ENSMUSG00000036902, Neto2, neuropilin (NRP) and tolloid (TLL)-like 2, [Score=97.8, Expect=6e-21]} {Dmel: FBgn0265416, Neto, Neuropilin and tolloid-like, [Score=87.8, Expect=1e-17]} {Celegans: WBGene00019360, neto-1, NETO (NEuropilin and TOlloid-like) homolog, [Score=77.4, Expect=4e-15]} {Smed: dd_Smed_v6_8579_0_1, dd_Smed_v6_8579_0_1, [Score=87.0, Expect=1e-17]} {RNA1310_38111}

Mlig455_037458 {REF} {Length: 2349} {Pfam: CUB domain [PF00431.22, score=52.1]; Low-density lipoprotein receptor domain class A [PF00057.20, score=31.7]} {Human: ENSG00000171208, NETO2, neuropilin and tolloid like 2, [RH, Score=144, Expect=9e-37]} {Mouse: ENSMUSG00000036902, Neto2, neuropilin (NRP) and tolloid (TLL)-like 2, [RH, Score=146, Expect=1e-37]} {Dmel: FBgn0265416, Neto, Neuropilin and tolloid-like, [Score=117, Expect=2e-27]} {Celegans: WBGene00019360, neto-1, NETO (NEuropilin and TOlloid-like) homolog, [Score=105, Expect=1e-24]} {Smed: dd_Smed_v6_8579_0_1, dd_Smed_v6_8579_0_1, [Score=115, Expect=6e-27]} {RNA1310_38111}
11. MligTC455_05874 5 0.11 Mlig455_049976

Neo: -

Age: -

 0.998 - - 0.998 - - - Mlig455_049976 {REF} {Length: 389} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_109621}
12. MligTC455_41475 43 0.89 Mlig455_021663, Mlig455_021712

Neo: -

Age: -

 0.998 - - 0.998 - - -

Mlig455_021663 {REF} {Length: 486} {NoTransDecoderORF} {RNA1310_96898}

Mlig455_021712 {REF} {Length: 812} {NoTransDecoderORF} {RNA1310_96898}
13. MligTC455_49949 46 0.95 Mlig455_069056

Neo: -

Age: -

 ASIC1 0.998 - - 0.998 - - - Mlig455_069056 {REF} {Length: 2381} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=204.6]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=58.5, Expect=3e-08]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=58.2, Expect=2e-08]; ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=57.4, Expect=4e-08]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=76.6, Expect=2e-14]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=94.4, Expect=4e-20]} {RNA1509_44792} {RNA1310_8631} {RNA815_5782}
14. MligTC455_08407 22 0.46 Mlig455_043162

Neo: -

Age: -

 0.991 - - 0.991 - - - Mlig455_043162 {REF} {Length: 1257} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.7]} {RNA1310_58288} {RNA815_55196}
15. MligTC455_10386 40 0.84 Mlig455_016460, Mlig455_016526, Mlig455_049813

Neo: -

Age: Up-Down-Down

 CHRNA2, CHRNA6 0.989 - - 0.989 - - -

Mlig455_016460 {REF} {Length: 2441} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=111.5]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=211, Expect=9e-61]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=209, Expect=4e-60]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=201, Expect=5e-56]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=214, Expect=3e-62]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=211, Expect=1e-60]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=216, Expect=6e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=210, Expect=8e-61]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=439, Expect=5e-148]} {RNA1310_41035} {RNA815_43177}

Mlig455_016526 {REF} {Length: 2438} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=111.5]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=211, Expect=8e-61]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=209, Expect=4e-60]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=201, Expect=6e-56]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=214, Expect=4e-62]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=211, Expect=1e-60]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=216, Expect=6e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=210, Expect=8e-61]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=439, Expect=4e-148]} {RNA1310_41035} {RNA815_43177}

Mlig455_049813 {REF} {Length: 2457} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=109.6]} {Human: ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=209, Expect=5e-60]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=207, Expect=1e-59]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=6e-57]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=3e-57]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=5e-57]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=201, Expect=6e-56]} {Mouse: ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=213, Expect=1e-61]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=212, Expect=1e-61]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=204, Expect=2e-58]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=203, Expect=6e-57]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=217, Expect=4e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=209, Expect=1e-60]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=439, Expect=3e-148]} {RNA1310_41035} {RNA815_43177}
16. MligTC455_00524 6 0.12 Mlig455_035116

Neo: -

Age: -

 0.988 - - 0.988 - - - Mlig455_035116 {REF} {Length: 886} {NoTransDecoderORF}
17. MligTC455_39681 136 2.83 Mlig455_045908, Mlig455_045958, Mlig455_063327

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.624

Region-enriched R2: 4.082/0.00717
Region-enriched R8: 3.863/0.01304

 CASP1, CASP7 0.988 - - 0.988 - - -

Mlig455_045908 {REF} {Length: 1556} {NoTransDecoderORF} {RNA1310_115705} {RNA815_46116}

Mlig455_045958 {REF} {Length: 1362} {Pfam: Caspase domain [PF00656.24, score=68.0]} {Human: ENSG00000165806, CASP7, caspase 7, [Score=57.8, Expect=3e-09]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=58.9, Expect=1e-09]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=53.1, Expect=6e-08]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=49.7, Expect=4e-07]} {RNA1310_50397} {RNA815_46116}

Mlig455_063327 {REF} {Length: 3941} {Pfam: Caspase domain [PF00656.24, score=81.3]} {Human: ENSG00000137752, CASP1, caspase 1, [Score=79.7, Expect=1e-15]} {Mouse: ENSMUSG00000025888, Casp1, caspase 1, [Score=82.8, Expect=1e-16]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=63.2, Expect=2e-10]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=75.9, Expect=6e-15]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=73.9, Expect=1e-14]} {RNA1509_50041} {RNA1310_2539.1} {RNA815_252.1}
18. MligTC455_27078 22 0.46 Mlig455_028337, Mlig455_066176

Neo: -

Age: -

 0.987 - - 0.987 - - -

Mlig455_028337 {REF} {Length: 887} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_69307} {RNA815_55083}

Mlig455_066176 {REF} {Length: 883} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_69307} {RNA815_55083}
19. MligTC455_33913 32 0.66 Mlig455_047326

Neo: -

Age: -

 SPON1 0.986 - - 0.986 - - - Mlig455_047326 {REF} {Length: 2405} {Pfam: Spondin_N [PF06468.15, score=98.6]} {Human: ENSG00000262655, SPON1, spondin 1, [Score=117, Expect=1e-27]} {Mouse: ENSMUSG00000038156, Spon1, spondin 1, (f-spondin) extracellular matrix protein, [Score=115, Expect=4e-27]} {Dmel: FBgn0033710, CG17739, [Score=105, Expect=3e-24]} {Celegans: WBGene00006893, spon-1, SPONdin (Extracellular matrix glycoprotein) family, [Score=83.6, Expect=5e-17]} {Smed: dd_Smed_v6_2400_0_1, dd_Smed_v6_2400_0_1, [Score=83.6, Expect=4e-17]} {RNA1509_30850} {RNA1310_29306} {RNA815_50316}
20. MligTC455_37794 20 0.42 Mlig455_017854, Mlig455_047876

Neo: -

Age: -

 0.986 - - 0.986 - - -

Mlig455_017854 {REF} {Length: 3779} {NoTransDecoderORF} {RNA1509_51255} {RNA1310_84895} {RNA815_39433}

Mlig455_047876 {REF} {Length: 3089} {NoTransDecoderORF} {RNA1310_84895}
21. MligTC455_43084 5 0.11 Mlig455_035337

Neo: -

Age: -

 0.979 - - 0.979 - - - Mlig455_035337 {REF} {Length: 1065} {Pfam: Lectin C-type domain [PF00059.23, score=29.5]} {Smed: dd_Smed_v6_38541_0_2, dd_Smed_v6_38541_0_2, [Score=47.0, Expect=2e-06]} {RNA1509_45080} {RNA1310_133134}
22. MligTC455_43829 45 0.95 Mlig455_008872, Mlig455_008973

Neo: -

Age: Down-Up-Up

 TLL1 0.979 - - 0.979 - - -

Mlig455_008872 {REF} {Length: 3395} {Pfam: CUB domain [PF00431.22, score=147.6]} {Human: ENSG00000038295, TLL1, tolloid like 1, [Score=92.8, Expect=1e-18]} {Mouse: ENSMUSG00000053626, Tll1, tolloid-like, [Score=91.3, Expect=3e-18]} {Dmel: FBgn0261262, CG42613, [Score=102, Expect=9e-22]} {Celegans: WBGene00002977, lev-10, LEV-10B, [Score=79.0, Expect=9e-15]} {Smed: dd_Smed_v6_19493_0_1, dd_Smed_v6_19493_0_1, [Score=265, Expect=1e-76]} {RNA1509_49507} {RNA1310_6026} {RNA815_27015}

Mlig455_008973 {REF} {Length: 2985} {Pfam: CUB domain [PF00431.22, score=149.2]} {Human: ENSG00000038295, TLL1, tolloid like 1, [Score=90.5, Expect=7e-18]; ENSG00000107611, CUBN, cubilin, [Score=86.3, Expect=2e-16]} {Mouse: ENSMUSG00000053626, Tll1, tolloid-like, [Score=89.0, Expect=2e-17]} {Dmel: FBgn0261262, CG42613, [Score=101, Expect=1e-21]} {Celegans: WBGene00002977, lev-10, LEV-10B, [Score=81.6, Expect=1e-15]} {Smed: dd_Smed_v6_19493_0_1, dd_Smed_v6_19493_0_1, [Score=267, Expect=2e-77]} {RNA1509_49507, RNA1509_572} {RNA1310_6026, RNA1509_49507, RNA1509_572} {RNA1509_49507, RNA1509_572, RNA815_27015}
23. MligTC455_04059 25 0.52 Mlig455_032168

Neo: -

Age: -

 0.975 - - - - - 0.975 Mlig455_032168 {REF} {Length: 2630} {Pfam: FLYWCH zinc finger domain [PF04500.18, score=30.1]; PHD-finger [PF00628.31, score=26.6]; FAM76 protein [PF16046.7, score=21.6]} {RNA1310_70692} {RNA815_33489}
24. MligTC455_45050 55 1.14 Mlig455_067805

Neo: -

Age: -

 ADSL 0.973 - - 0.973 - - - Mlig455_067805 {REF} {Length: 3003} {TRANSSPLICED} {Pfam: Lyase [PF00206.22, score=80.8]} {Human: ENSG00000239900, ADSL, adenylosuccinate lyase, [Score=447, Expect=2e-155]} {Mouse: ENSMUSG00000022407, Adsl, adenylosuccinate lyase, [Score=446, Expect=3e-155]} {Dmel: FBgn0038467, AdSL, Adenylosuccinate Lyase, [Score=431, Expect=1e-148]} {Celegans: WBGene00011064, adsl-1, Adenylosuccinate lyase, [Score=314, Expect=2e-104]} {Smed: dd_Smed_v6_2280_0_1, dd_Smed_v6_2280_0_1, [Score=416, Expect=4e-143]} {RNA1509_16456} {RNA1310_14851} {RNA815_12501}
25. MligTC455_09501 17 0.36 Mlig455_051721, Mlig455_051744

Neo: Int S/G2/M

Age: -

 0.969 - - - - - 0.969

Mlig455_051721 {REF} {Length: 2673} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=142.6]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=60.8, Expect=2e-09]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=248, Expect=1e-73]} {RNA1509_19376} {RNA1310_47426} {RNA815_43225}

Mlig455_051744 {REF} {Length: 1805} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=143.0]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=62.4, Expect=9e-10]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=246, Expect=7e-73]} {RNA1310_64849} {RNA815_43225}
26. MligTC455_43783 8 0.17 Mlig455_018589

Neo: -

Age: -

 0.968 - - 0.968 - - - Mlig455_018589 {REF} {Length: 1005} {Pfam: WSC domain [PF01822.21, score=54.3]}
27. MligTC455_37635 12 0.25 Mlig455_004976, Mlig455_018805, Mlig455_034454, Mlig455_037269

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.658

 0.963 - - - - - 0.963

Mlig455_004976 {REF} {Length: 889} {NoTransDecoderORF} {RNA1509_34079} {RNA1310_61747} {RNA815_18554}

Mlig455_018805 {REF} {Length: 205} {NoTransDecoderORF} {RNA1509_38419} {RNA1310_64671} {RNA815_18160}

Mlig455_034454 {REF} {Length: 317} {NoTransDecoderORF} {RNA1509_38419} {RNA1310_44550.2} {RNA815_18554}

Mlig455_037269 {REF} {Length: 475} {RNA1509_34079} {RNA1310_44550.2} {RNA815_16948}
28. MligTC455_39926 16 0.33 Mlig455_019195

Neo: -

Age: -

Region-enriched R2: 10.215/0.00176

 0.961 - - - - 0.961 - Mlig455_019195 {REF} {Length: 1396} {TRANSSPLICED} {RNA1310_52751} {RNA815_26203}
29. MligTC455_09573 9 0.18 Mlig455_034666

Neo: -

Age: -

 0.958 - - 0.958 - - - Mlig455_034666 {REF} {Length: 444} {NoTransDecoderORF} {RNA1310_102145.2}
30. MligTC455_13640 10 0.21 Mlig455_021951

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_021951 {REF} {Length: 209} {NoTransDecoderORF}
31. MligTC455_13367 35 0.74 Mlig455_013408, Mlig455_013449

Neo: -

Age: Up-Up-Down

Region-enriched R5: 5.012/0.00022

 PLSCR1 0.954 - - - - - 0.954

Mlig455_013408 {REF} {Length: 1203} {Pfam: Scramblase [PF03803.17, score=113.6]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [Score=90.5, Expect=2e-20]} {Mouse: ENSMUSG00000074139, 1700057G04Rik, RIKEN cDNA 1700057G04 gene, [Score=80.9, Expect=2e-17]} {Celegans: WBGene00014200, scrm-2, Phospholipid scramblase, [Score=112, Expect=4e-29]} {Smed: dd_Smed_v6_4899_0_1, dd_Smed_v6_4899_0_1, [Score=101, Expect=4e-25]} {RNA1509_53352} {RNA1310_33985, RNA1509_53352} {RNA1509_53352, RNA815_19305}

Mlig455_013449 {REF} {Length: 994} {Pfam: Scramblase [PF03803.17, score=66.8]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [Score=53.9, Expect=9e-08]} {Mouse: ENSMUSG00000074139, 1700057G04Rik, RIKEN cDNA 1700057G04 gene, [Score=47.4, Expect=6e-06]} {Celegans: WBGene00014200, scrm-2, Phospholipid scramblase, [Score=85.1, Expect=4e-19]} {Smed: dd_Smed_v6_4899_0_1, dd_Smed_v6_4899_0_1, [Score=68.2, Expect=5e-13]} {RNA1509_53352} {RNA1310_33985} {RNA815_19305}
32. MligTC455_15449 384 7.99 Mlig455_043360

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_043360 {REF} {Length: 1602} {NoTransDecoderORF} {RNA1509_38319} {RNA1310_35989.1} {RNA815_36673}
33. MligTC455_23809 119 2.47 Mlig455_065200

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_065200 {REF} {Length: 2060} {Pfam: Pacifastin inhibitor (LCMII) [PF05375.15, score=33.7]} {RNA1509_46843} {RNA1310_11232} {RNA815_41042}
34. MligTC455_18676 24 0.5 Mlig455_018143, Mlig455_056919

Neo: -

Age: -

 0.952 - - - - - 0.952

Mlig455_018143 {REF} {Length: 569} {RNA1509_2129} {RNA1310_82423} {RNA815_43981}

Mlig455_056919 {REF} {Length: 119} {NoTransDecoderORF} {RNA1310_82423} {RNA815_43981}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA